| Hydration-Coupled Dynamics in Proteins Studied by Neutron Scattering and NMR: The Case of the Typical EF-Hand Calcium-Binding Parvalbumin Biophysical Journal, Volume 76, Issue 5, 1 May 1999, Pages 2390-2411 Jean-Marc Zanotti, Marie-Claire Bellissent-Funel and Joseph Parello Abstract The influence of hydration on the internal dynamics of a typical EF-hand calciprotein, parvalbumin, was investigated by incoherent quasi-elastic neutron scattering (IQNS) and solid-state C-NMR spectroscopy using the powdered protein at different hydration levels. Both approaches establish an increase in protein dynamics upon progressive hydration above a threshold that only corresponds to partial coverage of the protein surface by the water molecules. Selective motions are apparent by NMR in the 10-ns time scale at the level of the polar lysyl side chains (externally located), as well as of more internally located side chains (from Ala and Ile), whereas IQNS monitors diffusive motions of hydrogen atoms in the protein at time scales up to 20ps. Hydration-induced dynamics at the level of the abundant lysyl residues mainly involve the ammonium extremity of the side chain, as shown by NMR. The combined results suggest that peripheral water-protein interactions influence the protein dynamics in a global manner. There is a progressive induction of mobility at increasing hydration from the periphery toward the protein interior. This study gives a microscopic view of the structural and dynamic events following the hydration of a globular protein. Abstract | Full Text | PDF (464 kb) |
| Reorientations in the bacteriorhodopsin photoscycle are pH dependent Biophysical Journal, Volume 70, Issue 5, 1 May 1996, Pages 2352-2357 G.S. Harms, Q. Song and C.K. Johnson Abstract Chromophore reorientations during the bacteriorhodopsin photocycle in the purple membrane of Halobacterium salinarium have been detected by time-resolved linear dichroism measurements of the optical anisotropy over the pH range from 4 to 10 and at ionic strengths from 10 mM to 1 M. The results show that reorientations in the L and M states of bacteriorhodopsin are pH dependent, reaching their largest amplitude when the membrane is at pH 6–8. Reorientations on the millisecond time scale of unexcited spectator proteins in the native purple membrane also depend on pH, consistent with the suggestion that spectator reorientations are triggered by reorientation of the photoexcited protein. The results imply that a group with a PK(a) of 5 to 6 enables reorientations, and that the deprotonation of a site at pH values above 9 restricts reorientational motion. This suggests that reorientations in M may be correlated with proton release. Abstract | PDF (596 kb) |
| Europium III Binding and the Reorientation of Magnetically Aligned Bicelles: Insights from Deuterium NMR Spectroscopy Biophysical Journal, Volume 81, Issue 1, 1 July 2001, Pages 255-265 Kevin J. Crowell and Peter M. Macdonald Abstract Solid-state deuterium (H) NMR spectroscopy was used to study the reorientation of magnetically ordered bicelles in the presence of the paramagnetic lanthanide Eu. Bicelles were composed of 1,2-dimyristoyl--glycero-3-phosphocholine (DMPC) plus 1,2-dihexanoyl--glycero-3-phosphocholine plus either the anionic lipid 1,2-dimyristoyl--3-phosphoglycerol, or the cationic lipid 1,2-dimyristoyl-3-trimethyl ammonium propane. Alignment of the bicelles in the magnetic field produced H NMR spectra consisting of a pair of quadrupole doublets, one from the -deuterons and one from the -deuterons of DMPC-,-. Eu addition induced the appearance of a second set of quadrupole doublets, having approximately twice the quadrupolar splittings of the originals, and growing progressively in intensity with increasing Eu, at the expense of the intensity of the originals. The new resonances were attributed to bicelles having a parallel alignment with respect to the magnetic field, as opposed to the perpendicular alignment preferred in the absence of Eu. Therefore, the equilibrium degree and kinetics of reorientation could be evaluated from the H NMR spectra. For more cationic initial surface charges, higher amounts of added Eu were required to induce a given degree of reorientation. However, the equilibrium degree of bicellar reorientation was found to depend solely on the amount of bound Eu, regardless of the bicelle composition. The kinetics of reorientation were a function of lipid concentration. At high lipid concentration, a single fast rate of reorientation (minutes) described the approach to the equilibrium degree of orientation. At lower lipid concentrations, two rates processes were discernible: one fast (minutes) and one slow (hours). The data indicate, therefore, that bicelle reorientation is a phase transition made critical by bicelle-bicelle interactions. Abstract | Full Text | PDF (253 kb) |
Copyright © 1980 The Biophysical Society. All rights reserved.
Biophysical Journal, Volume 32, Issue 1, 3-16, 1 October 1980
doi:10.1016/S0006-3495(80)84912-5
Research Article
R.G. Bryant and W.M. Shirley
Nuclear magnetic resonance (NMR) measurements provide both structural and dynamical information about the molecules in which nuclear resonances are observed. This manuscript addresses NMR relaxation of water protons in protein powder systems. Inclusion of magnetic communication between the water proton spins and protein proton spins leads to a clearer view of water molecule dynamics at the protein surface than has been previously available. We conclude that water molecule motion at the protein surface is somewhat slower than in the solute free solvent, but it is orders of magnitude faster than motions in a rigid ice lattice even in samples hydrated to levels well below what is generally thought to be the full hydration complement of the protein. The NMR relaxation data on lysozyme powders support a model that leaves adsorbed water very fluid at the protein surface with reorientational correlation times for the water shorter than nanoseconds.