| Sampling Field Heterogeneity at the Heme of c-Type Cytochromes by Spectral Hole Burning Spectroscopy and Electrostatic Calculations Biophysical Journal, Volume 77, Issue 6, 1 December 1999, Pages 3293-3304 Monique Laberge, Martin Köhler, Jane M. Vanderkooi and Josef Friedrich Abstract We report on a comparative investigation of the heme pocket fields of two Zn-substituted -type cytochromes—namely yeast and horse heart cytochromes —using a combination of hole burning Stark spectroscopy and electrostatic calculations. The spectral hole burning experiments are consistent with different pocket fields experienced at the hemes of the respective cytochromes. In the case of horse heart Zn-cytochrome , two distinguishable electronic origins with different electrostatic properties are observed. The yeast species, on the other hand, displays a single electronic origin. Electrostatic calculations and graphics modeling using the linearized finite-difference Poisson-Boltzmann equation performed at selected time intervals on nanosecond-molecular dynamics trajectories show that the hemes of the respective cytochromes sample different potentials as they explore conformational space. The electrostatic potentials generated by the protein matrix at the heme show different patterns in both cytochromes, and we suggest that the cytochromes differ by the number of “electrostatic substates” that they can sample, thus accounting for the different spectral populations observed in the two cytochromes. Abstract | Full Text | PDF (1343 kb) |
| Energy Selection Is Not Correlated in the Qx and Qy Bands of a Mg-Porphyrin Embedded in a Protein Biophysical Journal, Volume 80, Issue 1, 1 January 2001, Pages 498-504 Artur Suisalu, Koit Mauring, Jaak Kikas, Levente Herenyi and Judit Fidy Abstract The Q-Q splitting observed in the fluorescence excitation spectra of Mg-mesoporphyrin-IX substituted horseradish peroxidase (MgMP-HRP) and of its complex with naphthohydroxamic acid (NHA) was studied by spectral hole burning techniques. The width of a hole directly burnt in the Q band and that of a satellite hole indirectly produced in Q as a result of hole burning in Q was compared. We also studied the dependence of the satellite hole in the Q band on the burning frequency used in the Q band. Both the directly and indirectly burnt holes were very broad in the (higher energy) Q band. The width of the satellite hole in the Q band was equal to the entire width of the inhomogeneously broadened band, independently from the position of hole burning in Q. This is indicative of a clear lack of correlation between the electronic transition energies of the Q and Q bands. A photoproduct was produced by laser irradiation of the MgMP-HRP/NHA complex and was identified as a species with lowered Q-splitting. Conversion of the photoproduct could be achieved by thermal activation measured in temperature-cycling experiments, with a characteristic temperature of 25K. We attribute the phototransformation to a conformational change of MgMP. Abstract | Full Text | PDF (164 kb) |
| The Photoexcited Triplet State as a Probe of Chromophore-Protein Interaction in Myoglobin Biophysical Journal, Volume 75, Issue 3, 1 September 1998, Pages 1491-1502 Paul J. Angiolillo and Jane M. Vanderkooi Abstract The photoexcited metastable triplet state of Mg-mesoporphyrin IX (MgMPIX) or Mg-protoporphyrin IX (MgPPIX) located in the heme pocket of horse myoglobin (Mb) was investigated by optical and electron paramagnetic resonance (EPR) spectroscopy, and its properties were compared with the model complexes, MgMPIX, MgPPIX, and Mg etioporphyrin I (MgETIOI), in noncoordinating and coordinating organic glasses. Zero-field splitting parameters, line shape, and Jahn-Teller distortion in the temperature range of 3.8–110K are discussed in terms of porphyrin-protein interactions. The triplet line shapes for MgMPIXMb and MgPPIXMb show no temperature-dependent spectral line shape changes suggestive of Jahn-Teller dynamics, and it is concluded that the energy splitting is ≫150cm, suggesting symmetry breaking from the anisotropy of internal electric fields of the protein, and consistent with previous predictions (Geissinger et al. 1995. 99:16527–16529). Both MgMPIXMb and MgPPIXMb demonstrate electron spin polarization at low temperature, and from the polarization pattern it can be concluded that intersystem crossing occurs predominantly into in-plane spin sublevels of the triplet state. The splitting in the Q absorption band and the temperature dependence and splitting of the photoexcited triplet state of myoglobin in which the iron was replaced by Mg are interpreted in terms of effects produced by electric field asymmetry in the heme pocket. Abstract | Full Text | PDF (241 kb) |
Copyright © 1996 The Biophysical Society. All rights reserved.
Biophysical Journal, Volume 71, Issue 1, 77-85, 1 July 1996
doi:10.1016/S0006-3495(96)79237-8
Research Article
M. Köhler, J. Gafert, J. Friedrich, J.M. Vanderkooi and M. Laberge
Physikalisches Institut, Universität Bayreuth, Germany.
We performed hole-burning Stark effect experiments on cytochrome c in which the iron of the herne was either removed or replaced by Zn. According to the experiments, the free-base compound has an effective inversion center, even in the protein. The Zn compound, on the other hand, shows quite peculiar features: in the low-frequency range of the inhomogeneous band, it definitely has a dipole moment, as indicated by a splitting of the hole in the external field. However, in the maximum of the inhomogeneous band, a severe charge redistribution occurs, as the experiments show. In addition to the Stark experiments, we performed calculations of the electrostatic fields at the pyrrole rings and at the metal site of the heme group. We interpret our findings with a model based on structural hierarchies: the protein can exist in a few subconformations, which can be distinguished through the structure of the heme pocket. The different pocket structures support different structures of the chromophore, which, in turn, can be distinguished through their behavior in an external field. These distinct structures, in turn, correspond to a rather broad distribution of protein structures, which leave, however, the pocket structure largely unchanged. These structures show up in inhomogeneous broadening.