help button home button Biophys. J.
HOME HELP FEEDBACK SUBSCRIPTIONS ARCHIVE SEARCH TABLE OF CONTENTS

Biophysical Journal 72: 1900-1907 (1997)
© 1997 the Biophysical Society

This Article
Right arrow Full Text (PDF)
Right arrow Alert me when this article is cited
Right arrow Alert me if a correction is posted
Services
Right arrow Similar articles in this journal
Right arrow Similar articles in PubMed
Right arrow Alert me to new issues of the journal
Right arrow Download to citation manager
Right arrow reprints & permissions
Citing Articles
Right arrow Citing Articles via HighWire
Right arrow Citing Articles via Google Scholar
Google Scholar
Right arrow Articles by Swaminathan, R
Right arrow Articles by Verkman, A S
Right arrow Search for Related Content
PubMed
Right arrow PubMed Citation
Right arrow Articles by Swaminathan, R
Right arrow Articles by Verkman, A S

Photobleaching recovery and anisotropy decay of green fluorescent protein GFP-S65T in solution and cells: cytoplasmic viscosity probed by green fluorescent protein translational and rotational diffusion.

R Swaminathan, C P Hoang and A S Verkman

Department of Medicine, University of California, San Francisco 94143, USA.

ABSTRACT

The green fluorescent protein (GFP) was used as a noninvasive probe to quantify the rheological properties of cell cytoplasm. GFP mutant S65T was purified from recombinant bacteria for solution studies, and expressed in CHO cell cytoplasm. GFP-S65T was brightly fluorescent in solution (lambda ex 492 nm, lambda em 509 nm) with a lifetime of 2.9 ns and a rotational correlation time (tc) of 20 ns. Recovery of GFP fluorescence after photobleaching was complete with a half-time (t1/2) in aqueous saline of 30 +/- 2 ms (5-micron diameter spot), giving a diffusion coefficient of 8.7 x 10(-7) cm2/s. The t1/2 was proportional to solution viscosity and was dependent on spot diameter. In contrast to fluorescein. GFP photobleaching efficiency was not affected by solution O2 content, triplet state quenchers, singlet oxygen scavengers, and general radical quenchers. In solutions of higher viscosity, an additional, rapid GFP recovery process was detected and ascribed to reversible photobleaching. The t1/2 for reversible photobleaching was 1.5-5.5 ms (relative viscosity 5-250), was independent of spot diameter, and was unaffected by O2 or quenchers. In cell cytoplasm, time-resolved microfluorimetry indicated a GFP lifetime of 2.6 ns and a tc of 36 +/- 3 ns, giving a relative viscosity (cytoplasm versus water) of 1.5. Photobleaching recovery of GFP in cytoplasm was 82 +/- 2% complete with a t1/2 of 83 +/- 6 ms, giving a relative viscosity of 3.2. GFP translational diffusion increased 4.7-fold as cells swelled from a relative volume of 0.5 to 2. Taken together with measurements of GFP translation and rotation in aqueous dextran solutions, the data in cytoplasm support the view that the primary barrier to GFP diffusion is collisional interactions between GFP and macromolecular solutes.




This article has been cited by other articles:


Home page
J. Neurosci.Home page
L. Sjulson and G. Miesenbock
Rational Optimization and Imaging In Vivo of a Genetically Encoded Optical Voltage Reporter
J. Neurosci., May 21, 2008; 28(21): 5582 - 5593.
[Abstract] [Full Text] [PDF]


Home page
Ann. N. Y. Acad. Sci.Home page
M. WEISS
Probing the Interior of Living Cells with Fluorescence Correlation Spectroscopy
Ann. N.Y. Acad. Sci., May 1, 2008; 1130(1): 21 - 27.
[Abstract] [Full Text] [PDF]


Home page
Proc. Natl. Acad. Sci. USAHome page
P. Sun, F. O. Laforge, T. P. Abeyweera, S. A. Rotenberg, J. Carpino, and M. V. Mirkin
Nanoelectrochemistry of mammalian cells
PNAS, January 15, 2008; 105(2): 443 - 448.
[Abstract] [Full Text] [PDF]


Home page
Biophys. JHome page
P.-C. Lin, U. Kreutzer, and T. Jue
Anisotropy and Temperature Dependence of Myoglobin Translational Diffusion in Myocardium: Implication for Oxygen Transport and Cellular Architecture
Biophys. J., April 1, 2007; 92(7): 2608 - 2620.
[Abstract] [Full Text] [PDF]


Home page
Biophys. JHome page
S. T. Hess, T. P. K. Girirajan, and M. D. Mason
Ultra-High Resolution Imaging by Fluorescence Photoactivation Localization Microscopy
Biophys. J., December 1, 2006; 91(11): 4258 - 4272.
[Abstract] [Full Text] [PDF]


Home page
Biophys. JHome page
C. Pack, K. Saito, M. Tamura, and M. Kinjo
Microenvironment and Effect of Energy Depletion in the Nucleus Analyzed by Mobility of Multiple Oligomeric EGFPs
Biophys. J., November 15, 2006; 91(10): 3921 - 3936.
[Abstract] [Full Text] [PDF]


Home page
J. Bacteriol.Home page
M. C. Konopka, I. A. Shkel, S. Cayley, M. T. Record, and J. C. Weisshaar
Crowding and confinement effects on protein diffusion in vivo.
J. Bacteriol., September 1, 2006; 188(17): 6115 - 6123.
[Abstract] [Full Text] [PDF]


Home page
Biophys. JHome page
S. Aragon and D. K. Hahn
Precise Boundary Element Computation of Protein Transport Properties: Diffusion Tensors, Specific Volume, and Hydration
Biophys. J., September 1, 2006; 91(5): 1591 - 1603.
[Abstract] [Full Text] [PDF]


Home page
Biophys. JHome page
P. Hazra, K. Inoue, W. Laan, K. J. Hellingwerf, and M. Terazima
Tetramer Formation Kinetics in the Signaling State of AppA Monitored by Time-Resolved Diffusion
Biophys. J., July 15, 2006; 91(2): 654 - 661.
[Abstract] [Full Text] [PDF]


Home page
Biophys. JHome page
J. Beaudouin, F. Mora-Bermudez, T. Klee, N. Daigle, and J. Ellenberg
Dissecting the Contribution of Diffusion and Interactions to the Mobility of Nuclear Proteins
Biophys. J., March 15, 2006; 90(6): 1878 - 1894.
[Abstract] [Full Text] [PDF]


Home page
ScienceHome page
B. L. Bloodgood and B. L. Sabatini
Neuronal Activity Regulates Diffusion Across the Neck of Dendritic Spines
Science, November 4, 2005; 310(5749): 866 - 869.
[Abstract] [Full Text] [PDF]


Home page
Biophys. JHome page
D. S. Banks and C. Fradin
Anomalous Diffusion of Proteins Due to Molecular Crowding
Biophys. J., November 1, 2005; 89(5): 2960 - 2971.
[Abstract] [Full Text] [PDF]


Home page
Biophys. JHome page
I. F. Sbalzarini, A. Mezzacasa, A. Helenius, and P. Koumoutsakos
Effects of Organelle Shape on Fluorescence Recovery after Photobleaching
Biophys. J., September 1, 2005; 89(3): 1482 - 1492.
[Abstract] [Full Text] [PDF]


Home page
Biophys. JHome page
K. Snoussi and B. Halle
Protein Self-Association Induced by Macromolecular Crowding: A Quantitative Analysis by Magnetic Relaxation Dispersion
Biophys. J., April 1, 2005; 88(4): 2855 - 2866.
[Abstract] [Full Text] [PDF]


Home page
Biophys. JHome page
F. Waharte, C. M. Brown, S. Coscoy, E. Coudrier, and F. Amblard
A Two-Photon FRAP Analysis of the Cytoskeleton Dynamics in the Microvilli of Intestinal Cells
Biophys. J., February 1, 2005; 88(2): 1467 - 1478.
[Abstract] [Full Text] [PDF]


Home page
J. Biol. Chem.Home page
B.-R. Zhou, Y. Liang, F. Du, Z. Zhou, and J. Chen
Mixed Macromolecular Crowding Accelerates the Oxidative Refolding of Reduced, Denatured Lysozyme: IMPLICATIONS FOR PROTEIN FOLDING IN INTRACELLULAR ENVIRONMENTS
J. Biol. Chem., December 31, 2004; 279(53): 55109 - 55116.
[Abstract] [Full Text] [PDF]


Home page
J. Biol. Chem.Home page
D. Daelemans, S. V. Costes, E. H. Cho, R. A. Erwin-Cohen, S. Lockett, and G. N. Pavlakis
In Vivo HIV-1 Rev Multimerization in the Nucleolus and Cytoplasm Identified by Fluorescence Resonance Energy Transfer
J. Biol. Chem., November 26, 2004; 279(48): 50167 - 50175.
[Abstract] [Full Text] [PDF]


Home page
Biophys. JHome page
G. E. Snyder, T. Sakamoto, J. A. Hammer III, J. R. Sellers, and P. R. Selvin
Nanometer Localization of Single Green Fluorescent Proteins: Evidence that Myosin V Walks Hand-Over-Hand via Telemark Configuration
Biophys. J., September 1, 2004; 87(3): 1776 - 1783.
[Abstract] [Full Text] [PDF]


Home page
J. Cell Sci.Home page
O. Gerasimenko and J. Gerasimenko
New aspects of nuclear calcium signalling
J. Cell Sci., July 1, 2004; 117(15): 3087 - 3094.
[Abstract] [Full Text] [PDF]


Home page
Biophys. JHome page
B. L. Sprague, R. L. Pego, D. A. Stavreva, and J. G. McNally
Analysis of Binding Reactions by Fluorescence Recovery after Photobleaching
Biophys. J., June 1, 2004; 86(6): 3473 - 3495.
[Abstract] [Full Text] [PDF]


Home page
J. Biol. Chem.Home page
A. Kamada, H. Nagaya, T. Tamura, M. Kinjo, H.-Y. Jin, T. Yamashita, K. Jimbow, H. Kanoh, and I. Wada
Regulation of Immature Protein Dynamics in the Endoplasmic Reticulum
J. Biol. Chem., May 14, 2004; 279(20): 21533 - 21542.
[Abstract] [Full Text] [PDF]


Home page
Biophys. JHome page
J. M. Haugh and I. C. Schneider
Spatial Analysis of 3' Phosphoinositide Signaling in Living Fibroblasts: I. Uniform Stimulation Model and Bounds on Dimensionless Groups
Biophys. J., January 1, 2004; 86(1): 589 - 598.
[Abstract] [Full Text] [PDF]


Home page
Biophys. JHome page
N. I. Kiskin, J. P. Siebrasse, and R. Peters
Optical Microwell Assay of Membrane Transport Kinetics
Biophys. J., October 1, 2003; 85(4): 2311 - 2322.
[Abstract] [Full Text] [PDF]


Home page
Biophys. JHome page
S. T. Hess, E. D. Sheets, A. Wagenknecht-Wiesner, and A. A. Heikal
Quantitative Analysis of the Fluorescence Properties of Intrinsically Fluorescent Proteins in Living Cells
Biophys. J., October 1, 2003; 85(4): 2566 - 2580.
[Abstract] [Full Text] [PDF]


Home page
Mol. Biol. CellHome page
T. J. Yoder, C. G. Pearson, K. Bloom, and T. N. Davis
The Saccharomyces cerevisiae Spindle Pole Body Is a Dynamic Structure
Mol. Biol. Cell, August 1, 2003; 14(8): 3494 - 3505.
[Abstract] [Full Text] [PDF]


Home page
Biophys. JHome page
J. V. Rocheleau, M. Edidin, and D. W. Piston
Intrasequence GFP in Class I MHC Molecules, a Rigid Probe for Fluorescence Anisotropy Measurements of the Membrane Environment
Biophys. J., June 1, 2003; 84(6): 4078 - 4086.
[Abstract] [Full Text] [PDF]


Home page
Biophys. JHome page
M. Wachsmuth, T. Weidemann, G. Muller, U. W. Hoffmann-Rohrer, T. A. Knoch, W. Waldeck, and J. Langowski
Analyzing Intracellular Binding and Diffusion with Continuous Fluorescence Photobleaching
Biophys. J., May 1, 2003; 84(5): 3353 - 3363.
[Abstract] [Full Text] [PDF]


Home page
ScienceHome page
J. Lippincott-Schwartz and G. H. Patterson
Development and Use of Fluorescent Protein Markers in Living Cells
Science, April 4, 2003; 300(5616): 87 - 91.
[Abstract] [Full Text] [PDF]


Home page
J. Biol. Chem.Home page
K. Goyal, L. Tisi, A. Basran, J. Browne, A. Burnell, J. Zurdo, and A. Tunnacliffe
Transition from Natively Unfolded to Folded State Induced by Desiccation in an Anhydrobiotic Nematode Protein
J. Biol. Chem., April 4, 2003; 278(15): 12977 - 12984.
[Abstract] [Full Text] [PDF]


Home page
Proc. Natl. Acad. Sci. USAHome page
A. E. Cowan, D. E. Koppel, B. Setlow, and P. Setlow
A soluble protein is immobile in dormant spores of Bacillus subtilis but is mobile in germinated spores: Implications for spore dormancy
PNAS, April 1, 2003; 100(7): 4209 - 4214.
[Abstract] [Full Text] [PDF]


Home page
Proc. Natl. Acad. Sci. USAHome page
J. W. Taraska, D. Perrais, M. Ohara-Imaizumi, S. Nagamatsu, and W. Almers
Secretory granules are recaptured largely intact after stimulated exocytosis in cultured endocrine cells
PNAS, February 18, 2003; 100(4): 2070 - 2075.
[Abstract] [Full Text] [PDF]


Home page
Biophys. JHome page
X. Wei, V. G. Henke, C. Strubing, E. B. Brown, and D. E. Clapham
Real-Time Imaging of Nuclear Permeation by EGFP in Single Intact Cells
Biophys. J., February 1, 2003; 84(2): 1317 - 1327.
[Abstract] [Full Text] [PDF]


Home page
Biophys. JHome page
Q. Ruan, Y. Chen, E. Gratton, M. Glaser, and W. W. Mantulin
Cellular Characterization of Adenylate Kinase and Its Isoform: Two-Photon Excitation Fluorescence Imaging and Fluorescence Correlation Spectroscopy
Biophys. J., December 1, 2002; 83(6): 3177 - 3187.
[Abstract] [Full Text] [PDF]


Home page
J. Biol. Chem.Home page
A. Chakraborty, I. Das, R. Datta, B. Sen, D. Bhattacharyya, C. Mandal, and A. K. Datta
A Single-domain Cyclophilin from Leishmania donovani Reactivates Soluble Aggregates of Adenosine Kinase by Isomerase-independent Chaperone Function
J. Biol. Chem., November 27, 2002; 277(49): 47451 - 47460.
[Abstract] [Full Text] [PDF]


Home page
J. Biol. Chem.Home page
P. M. Haggie and A. S. Verkman
Diffusion of Tricarboxylic Acid Cycle Enzymes in the Mitochondrial Matrix in Vivo. EVIDENCE FOR RESTRICTED MOBILITY OF A MULTIENZYME COMPLEX
J. Biol. Chem., October 18, 2002; 277(43): 40782 - 40788.
[Abstract] [Full Text] [PDF]


Home page
J. Histochem. Cytochem.Home page
L. Greenbaum, D. Schwartz, and Z. Malik
Spectrally Resolved Microscopy of GFP Trafficking
J. Histochem. Cytochem., September 1, 2002; 50(9): 1205 - 1212.
[Abstract] [Full Text] [PDF]


Home page
Proc. Natl. Acad. Sci. USAHome page
J. F. Morley, H. R. Brignull, J. J. Weyers, and R. I. Morimoto
The threshold for polyglutamine-expansion protein aggregation and cellular toxicity is dynamic and influenced by aging in Caenorhabditiselegans
PNAS, August 6, 2002; 99(16): 10417 - 10422.
[Abstract] [Full Text] [PDF]


Home page
Protein Sci.Home page
G. Chirico, F. Cannone, S. Beretta, A. Diaspro, B. Campanini, S. Bettati, R. Ruotolo, and A. Mozzarelli
Dynamics of green fluorescent protein mutant2 in solution, on spin-coated glasses, and encapsulated in wet silica gels
Protein Sci., May 1, 2002; 11(5): 1152 - 1161.
[Abstract] [Full Text] [PDF]


Home page
Appl. Environ. Microbiol.Home page
J. S. Webb, S. R. Barratt, H. Sabev, M. Nixon, I. M. Eastwood, M. Greenhalgh, P. S. Handley, and G. D. Robson
Green Fluorescent Protein as a Novel Indicator of Antimicrobial Susceptibility in Aureobasidium pullulans
Appl. Envir. Microbiol., December 1, 2001; 67(12): 5614 - 5620.
[Abstract] [Full Text] [PDF]


Home page
J. Cell Biol.Home page
J. M. Haugh, F. Codazzi, M. Teruel, and T. Meyer
Spatial Sensing in Fibroblasts Mediated by 3' Phosphoinositides
J. Cell Biol., December 11, 2000; 151(6): 1269 - 1280.
[Abstract] [Full Text] [PDF]


Home page
J. Neurosci.Home page
A. Majewska, A. Tashiro, and R. Yuste
Regulation of Spine Calcium Dynamics by Rapid Spine Motility
J. Neurosci., November 15, 2000; 20(22): 8262 - 8268.
[Abstract] [Full Text] [PDF]


Home page
J. Cell Biol.Home page
A. Pralle, P. Keller, E.-L. Florin, K. Simons, and J.K.H. Horber
Sphingolipid-Cholesterol Rafts Diffuse as Small Entities in the Plasma Membrane of Mammalian Cells
J. Cell Biol., March 6, 2000; 148(5): 997 - 1008.
[Abstract] [Full Text] [PDF]


Home page
J. Biol. Chem.Home page
S. Jayaraman, P. Haggie, R. M. Wachter, S. J. Remington, and A. S. Verkman
Mechanism and Cellular Applications of a Green Fluorescent Protein-based Halide Sensor
J. Biol. Chem., February 25, 2000; 275(9): 6047 - 6050.
[Abstract] [Full Text] [PDF]


Home page
J. Biol. Chem.Home page
G. L. Lukacs, P. Haggie, O. Seksek, D. Lechardeur, N. Freedman, and A. S. Verkman
Size-dependent DNA Mobility in Cytoplasm and Nucleus
J. Biol. Chem., January 21, 2000; 275(3): 1625 - 1629.
[Abstract] [Full Text] [PDF]


Home page
J. Cell Sci.Home page
R. Kohler, P Schwille, W. Webb, and M. Hanson
Active protein transport through plastid tubules: velocity quantified by fluorescence correlation spectroscopy
J. Cell Sci., January 11, 2000; 113(22): 3921 - 3930.
[Abstract] [PDF]


Home page
J. Cell Sci.Home page
R Blum, D. Stephens, and I Schulz
Lumenal targeted GFP, used as a marker of soluble cargo, visualises rapid ERGIC to Golgi traffic by a tubulo-vesicular network
J. Cell Sci., January 9, 2000; 113(18): 3151 - 3159.
[Abstract] [PDF]


Home page
Proc. Natl. Acad. Sci. USAHome page
R. Brock, G. Vamosi, G. Vereb, and T. M. Jovin
Rapid characterization of green fluorescent protein fusion proteins on the molecular and cellular level by fluorescence correlation microscopy
PNAS, August 31, 1999; 96(18): 10123 - 10128.
[Abstract] [Full Text] [PDF]


Home page
ScienceHome page
A. B. Houtsmuller, S. Rademakers, A. L. Nigg, D. Hoogstraten, J. H. J. Hoeijmakers, and W. Vermeulen
Action of DNA Repair Endonuclease ERCC1/XPF in Living Cells
Science, May 7, 1999; 284(5416): 958 - 961.
[Abstract] [Full Text]


Home page
J. Biol. Chem.Home page
P. M. Haggie and K. M. Brindle
Mitochondrial Citrate Synthase Is Immobilized in Vivo
J. Biol. Chem., February 12, 1999; 274(7): 3941 - 3945.
[Abstract] [Full Text] [PDF]


Home page
J. Bacteriol.Home page
M. B. Elowitz, M. G. Surette, P.-E. Wolf, J. B. Stock, and S. Leibler
Protein Mobility in the Cytoplasm of Escherichia coli
J. Bacteriol., January 1, 1999; 181(1): 197 - 203.
[Abstract] [Full Text]


Home page
J. Biol. Chem.Home page
Y. Li, T. Smith, S. Grabski, and D. L. DeWitt
The Membrane Association Sequences of the Prostaglandin Endoperoxide Synthases-1 and -2 Isozymes
J. Biol. Chem., November 6, 1998; 273(45): 29830 - 29837.
[Abstract] [Full Text] [PDF]


Home page
J. Cell Biol.Home page
A. Partikian, B. Olveczky, R. Swaminathan, Y. Li, and A.S. Verkman
Rapid Diffusion of Green Fluorescent Protein in the Mitochondrial Matrix
J. Cell Biol., February 23, 1998; 140(4): 821 - 829.
[Abstract] [Full Text] [PDF]


Home page
J. Cell Biol.Home page
K. G. Wolter, Y.-T. Hsu, C. L. Smith, A. Nechushtan, X.-G. Xi, and R. J. Youle
Movement of Bax from the Cytosol to Mitochondria during Apoptosis
J. Cell Biol., December 1, 1997; 139(5): 1281 - 1292.
[Abstract] [Full Text] [PDF]


Home page
J. Cell Biol.Home page
O. Seksek, J. Biwersi, and A.S. Verkman
Translational Diffusion of Macromolecule-sized Solutes in Cytoplasm and Nucleus
J. Cell Biol., July 14, 1997; 138(1): 131 - 142.
[Abstract] [Full Text] [PDF]


Home page
J. Biol. Chem.Home page
M. A. Hink, R. A. Griep, J. W. Borst, A. van Hoek, M. H. M. Eppink, A. Schots, and A. J. W. G. Visser
Structural Dynamics of Green Fluorescent Protein Alone and Fused with a Single Chain Fv Protein
J. Biol. Chem., June 2, 2000; 275(23): 17556 - 17560.
[Abstract] [Full Text] [PDF]


Home page
J. Biol. Chem.Home page
M. H. Levin, P. M. Haggie, L. Vetrivel, and A. S. Verkman
Diffusion in the Endoplasmic Reticulum of an Aquaporin-2 Mutant Causing Human Nephrogenic Diabetes Insipidus
J. Biol. Chem., June 8, 2001; 276(24): 21331 - 21336.
[Abstract] [Full Text] [PDF]


Home page
J. Biol. Chem.Home page
J. Li, S. Zhang, and C.-c. Wang
Effects of Macromolecular Crowding on the Refolding of Glucose- 6-phosphate Dehydrogenase and Protein Disulfide Isomerase
J. Biol. Chem., September 7, 2001; 276(37): 34396 - 34401.
[Abstract] [Full Text] [PDF]




HOME HELP FEEDBACK SUBSCRIPTIONS ARCHIVE SEARCH TABLE OF CONTENTS
Copyright © 1997 by the Biophysical Society.