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Biophys J, October 1999, p. 2237-2250, Vol. 77, No. 4
*IFM-Department of Chemical Physics and #IFM-Department of Chemistry, Linköping University, SE-581 83 Linköping, Sweden; and §Medicinal Chemistry Research IV and ¶Tissue Factor/Factor VII Research, Novo Nordisk A/S, Novo Nordisk Park, Måløv, Denmark
Site-directed labeling was used to obtain local
information on the binding interface in a receptor-ligand complex. As a
model we have chosen the specific association of the extracellular part of tissue factor (sTF) and factor VIIa (FVIIa), the primary initiator of the blood coagulation cascade. Different spectroscopic labels were
covalently attached to an engineered cysteine in position 140 in sTF, a
position normally occupied by a Phe residue previously characterized as
an important contributor to the sTF:FVIIa interaction. Two spin labels,
IPSL [N-(1-oxyl-2,2,5,5-tetramethyl-3-pyrrolidinyl)iodoacetamide] and
MTSSL
[(1-oxyl-2,2,5,5-tetramethylpyrroline-3-methyl)methanethiosulfonate], and two fluorescent labels, IAEDANS [5-((((2-iodoacetyl)amino) ethyl)amino)naphthalene-1-sulfonic acid] and BADAN
[6-bromoacetyl-2-dimethylaminonaphthalene], were used. Spectral data
from electron paramagnetic resonance (EPR) and fluorescence
spectroscopy showed a substantial change in the local environment of
all labels when the sTF:FVIIa complex was formed. However, the
interaction was probed differently by each label and these differences
in spectral appearance could be attributed to differences in label
properties such as size, polarity, and/or flexibility. Accordingly,
molecular modeling data suggest that the most favorable orientations
are unique for each label. Furthermore, line-shape simulations of EPR
spectra and calculations based on fluorescence depolarization
measurements provided additional details of the local environment of
the labels, thereby confirming a tight protein-protein interaction
between FVIIa and sTF when the complex is formed. The tightness of this local interaction is similar to that seen in the interior of globular proteins.
Biophys J, October 1999, p. 2237-2250, Vol. 77, No. 4
© 1999 by the Biophysical Society 0006-3495/99/10/2237/14 $2.00
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