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Biophys J, November 2000, p. 2222-2234, Vol. 79, No. 5
Department of Biochemistry, Molecular Biology, and Biophysics, University of Minnesota, Saint Paul, Minnesota 55108-1022 USA
Changes in solvent environment greatly affect
macromolecular structure and stability. To investigate the role of
excluded volume in solvation, scaled-particle theory is often used to
calculate
Gtrev, the excluded-volume
portion of the solute transfer free energy,
Gtr. The inputs to SPT are the solvent radii
and molarities. Real molecules are not spheres. Hence, molecular radii
are not uniquely defined and vary for any given species. Since
Gtrev is extremely sensitive to solvent
radii, uncertainty in these radii causes a large uncertainty in
Gtrev
several kcal/mol for amino acid
solutes transferring from water to aqueous mixtures. This uncertainty
is larger than the experimental
Gtr values.
Also,
Gtrev can be either positive or
negative. Adding neutral crowding molecules may not necessarily reduce
solubility. Lastly,
Gtrev is very
sensitive to solvent density,
. A few percent error in
may even
cause qualitative deviations in
Gtrev.
For example, if
is calculated by assuming the hard-sphere pressure
to be constant, then
Gtrev values and
uncertainties are now only tenths of a kcal/mol and are positive.
Because
Gtrev values calculated by
scaled-particle theory are strongly sensitive to solvent radii and
densities, determining the excluded-volume contribution to transfer
free energies using SPT may be problematic.
Biophys J, November 2000, p. 2222-2234, Vol. 79, No. 5
© 2000 by the Biophysical Society 0006-3495/00/11/2222/13 $2.00
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