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Biophys J, August 2001, p. 697-709, Vol. 81, No. 2
-Amyloid Peptide
Department of Chemistry, Boston University, Boston, Massachusetts 02215 USA
The amyloid peptide congener A
(10-35)-NH2
is simulated in an aqueous environment in both the wild type (WT) and
E22Q "Dutch" mutant forms. The origin of the noted increase in
deposition activity resulting from the Dutch mutation is investigated.
Multiple nanosecond time scale molecular dynamics trajectories were
performed and analyzed using a variety of measures of the peptide's
average structure, hydration, conformational fluctuations, and
dynamics. The results of the study support the conclusions that 1) the
E22Q mutant and WT peptide are both stable in "collapsed coil"
conformations consistent with the WT structure of Zhang et al. (2000,
J. Struct. Biol. 130:130-141); 2) the E22Q peptide is more
flexible in solution, supporting early claims that its equilibrium
structural fluctuations are larger than those of the WT peptide; and 3)
the local E22Q mutation leads to a change in the first solvation layer
in the region of the peptide's "hydrophobic patch," resulting in a
more hydrophobic solvation of the mutant peptide. The simulation
results support the view that the noted increase in activity due to the Dutch mutation results from an enhancement of the desolvation process
that is an essential step in the aggregation of the peptide.
Biophys J, August 2001, p. 697-709, Vol. 81, No. 2
© 2001 by the Biophysical Society 0006-3495/01/08/697/13 $2.00
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