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Biophys J, August 2001, p. 710-714, Vol. 81, No. 2
Department of Physics, Norwegian University of Science and Technology, NTNU, NO-7491 Trondheim, Norway
We construct a Hamiltonian for a single domain protein
where the contact enthalpy and the chain entropy decrease linearly with
the number of native contacts. The hydration effect upon protein
unfolding is included by modeling water as ideal dipoles that are
ordered around the unfolded surfaces, where the influence of these
surfaces, covered with an "ice-like" shell of water, is represented
by an effective field that directs the water dipoles. An intermolecular
pair interaction between water molecules is also introduced. The heat
capacity of the model exhibits, the common feature of small globular
proteins, two peaks corresponding to cold and warm unfolding,
respectively. By introducing ad hoc vibrational modes, we obtain
quantitatively good accordance with experiments on myoglobin.
Biophys J, August 2001, p. 710-714, Vol. 81, No. 2
© 2001 by the Biophysical Society 0006-3495/01/08/710/05 $2.00
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