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* Graduate School of Bioscience and Biotechnology, Tokyo Institute of Technology, Yokohama, Japan;
Department of Bioengineering, Nagaoka University of Technology, Nagaoka, Niigata, Japan;
Precision and Intelligence Laboratory, Tokyo Institute of Technology, Yokohama, Japan;
Genome Science Center, RIKEN, Yokohama, Japan; ¶ Institute for Biological Resources and Functions, National Institute of Advanced Industrial Science and Technology, Ibaraki, Japan; || Graduate School of Science, University of Tokyo, Tokyo, Japan; and ** Division of Bioengineering and Physical Science, ORS, National Institutes of Health, Bethesda, Maryland
Correspondence: Address reprint requests to Fumio Arisaka, PhD, Graduate School of Bioscience and Biotechnology, Tokyo Institute of Technology, 4259 Nagatsuta, Midori-ku, Yokohama 226-8501, Japan. Tel./Fax: 81-45-924-5713; E-mail: farisaka{at}bio.titech.ac.jp.
The association of a molecular chaperone, gp57A, of bacteriophage T4, which facilitates formation of the long and short tail fibers, was investigated by analytical ultracentrifugation, differential scanning microcalorimetry, and stopped-flow circular dichroism (CD) to establish the association scheme of the protein. Gp57A is an oligomeric
-helix protein with 79 amino acids. Analysis of the sedimentation velocity data by direct boundary modeling with Lamm equation solutions together with a more detailed boundary analysis incorporating association schemes led us to conclude that at least three oligomeric species of gp57A are in reversible and fast association equilibria and that a 3mer-6mer-12mer model described the data best. On the other hand, differential scanning microcalorimetry revealed a highly reversible two-step transition of dissociation/denaturation, both of which accompanied decrease in CD at 222 nm. The melting curve analysis revealed that it is consistent with a 6mer-3mer-1mer model. The refolding/association kinetics of gp57A measured by stopped-flow CD was consistent with the interpretation that the bimolecular reaction from trimer to hexamer was preceded by a fast
-helix formation in the dead-time. Trimer or hexamer is likely the functional oligomeric state of gp57A.
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