| HOME | HELP | FEEDBACK | SUBSCRIPTIONS | ARCHIVE | SEARCH | TABLE OF CONTENTS |
Institut Curie-Recherche (INSERM U350), Centre Universitaire, 91405 Orsay, France
Correspondence: Address reprint requests to Daniel Lavalette, E-mail: daniel.lavalette{at}curie.u-psud.fr.
Evidence for ligand migration toward the xenon-binding cavities in myoglobin comes from a number of laser photolysis studies of MbO2 including mutants and from cryo- and time-resolved crystallography of MbCO. To explore ligand migration in greater detail, we investigated the rebinding kinetics of both MbO2 and MbCO under a xenon partial pressure ranging from 1 to 16 atm over the temperature range (29377 K). Below 180 K xenon affects to a significant, but minor, extent the thermodynamic parameters for rebinding from the primary docking site in each Mb taxonomic substate. Above 200 K the ligand migrates to the proximal Xe1 site but when the latter is occupied by xenon a new kinetic process appears. It is attributed to rebinding from transient docking sites located on the path between the primary and the secondary docking site of both ligands. Ligand escape exhibits a more complicated pattern than expected. At room temperature O2 and CO escape appears to take place exclusively from the primary site. In contrast, at T
250 K, roughly 50% of the CO molecules that have escaped from the protein originate from the Xe1 secondary site.
This article has been cited by other articles:
![]() |
J. Z. Ruscio, D. Kumar, M. Shukla, M. G. Prisant, T. M. Murali, and A. V. Onufriev Atomic level computational identification of ligand migration pathways between solvent and binding site in myoglobin PNAS, July 8, 2008; 105(27): 9204 - 9209. [Abstract] [Full Text] [PDF] |
||||
![]() |
R. J. Naftalin, N. Green, and P. Cunningham Lactose Permease H+-Lactose Symporter: Mechanical Switch or Brownian Ratchet? Biophys. J., May 15, 2007; 92(10): 3474 - 3491. [Abstract] [Full Text] [PDF] |
||||
![]() |
R. A. Goldbeck, S. Bhaskaran, C. Ortega, J. L. Mendoza, J. S. Olson, J. Soman, D. S. Kliger, and R. M. Esquerra Water and ligand entry in myoglobin: Assessing the speed and extent of heme pocket hydration after CO photodissociation PNAS, January 31, 2006; 103(5): 1254 - 1259. [Abstract] [Full Text] [PDF] |
||||
![]() |
D. Dantsker, C. Roche, U. Samuni, G. Blouin, J. S. Olson, and J. M. Friedman The Position 68(E11) Side Chain in Myoglobin Regulates Ligand Capture, Bond Formation with Heme Iron, and Internal Movement into the Xenon Cavities J. Biol. Chem., November 18, 2005; 280(46): 38740 - 38755. [Abstract] [Full Text] [PDF] |
||||
![]() |
M. Schmidt, K. Nienhaus, R. Pahl, A. Krasselt, S. Anderson, F. Parak, G. U. Nienhaus, and V. Srajer Ligand migration pathway and protein dynamics in myoglobin: A time-resolved crystallographic study on L29W MbCO PNAS, August 16, 2005; 102(33): 11704 - 11709. [Abstract] [Full Text] [PDF] |
||||
![]() |
C. Tetreau, L. Mouawad, S. Murail, P. Duchambon, Y. Blouquit, and D. Lavalette Disentangling Ligand Migration and Heme Pocket Relaxation in Cytochrome P450cam Biophys. J., February 1, 2005; 88(2): 1250 - 1263. [Abstract] [Full Text] [PDF] |
||||
![]() |
M. Levantino, A. Cupane, L. Zimanyi, and P. Ormos Different relaxations in myoglobin after photolysis PNAS, October 5, 2004; 101(40): 14402 - 14407. [Abstract] [Full Text] [PDF] |
||||
![]() |
N. Agmon Coupling of Protein Relaxation to Ligand Binding and Migration in Myoglobin Biophys. J., September 1, 2004; 87(3): 1537 - 1543. [Abstract] [Full Text] [PDF] |
||||
| HOME | HELP | FEEDBACK | SUBSCRIPTIONS | ARCHIVE | SEARCH | TABLE OF CONTENTS |