| HOME | HELP | FEEDBACK | SUBSCRIPTIONS | ARCHIVE | SEARCH | TABLE OF CONTENTS |


* Departamento de Ciencias Experimentales, Universidad Jaume I, Castellón, Spain; and
Laboratory of Physical and Structural Biology, National Institute of Child Health and Human Development, National Institutes of Health, Bethesda, Maryland
Correspondence: Address reprint requests to Prof. Vicente M. Aguilella, Universidad Jaume I, Dep. Ciencias Experimentales, Castellón 12080, Spain. Tel.: 34-964-728045; E-mail: aguilell{at}exp.uji.es.
Although the crystallographic structure of the bacterial porin OmpF has been known for a decade, the physical mechanisms of its ionic selectivity are still under investigation. We address this issue in a series of experiments with varied pH, salt concentrations, inverted salt gradient, and charged and uncharged lipids. Measuring reversal potential, we show that OmpF selectivity (traditionally regarded as slightly cationic) depends strongly on pH and salt concentration and is conditionally asymmetric, that is, the calculated selectivity is sensitive to the direction of salt concentration gradient. At neutral pH and subdecimolar salt concentrations the channel exhibits nearly ideal cation selectivity (
). Substituting neutral DPhPC with DPhPS, we demonstrate that the fixed charge of the host lipid has a small but measurable effect on the channel reversal potential. The available structural information allows for a qualitative explanation of our experimental findings. These findings now lead us to re-examine the ionization state of 102 titratable sites of the OmpF channel. Using standard methods of continuum electrostatics tailored to our particular purpose, we find the charge distribution in the channel as a function of solution acidity and relate the pH-dependent asymmetry in channel selectivity to the pH-dependent asymmetry in charge distribution. In an attempt to find a simple phenomenological description of our results, we also discuss different macroscopic models of electrodiffusion through large channels.
This article has been cited by other articles:
![]() |
J. Cervera, A. G. Komarov, and V. M. Aguilella Rectification Properties and pH-Dependent Selectivity of Meningococcal Class 1 Porin Biophys. J., February 15, 2008; 94(4): 1194 - 1202. [Abstract] [Full Text] [PDF] |
||||
![]() |
U. Wedemeyer, G. Peng, H. Michel, and K. Hartung Protein AQ_1862 from the Hyperthermophilic Bacterium Aquifex aeolicus Is a Porin and Contains Two Conductance Pathways of Different Selectivity Biophys. J., October 15, 2007; 93(8): 2667 - 2677. [Abstract] [Full Text] [PDF] |
||||
![]() |
W. R. Bauer and W. Nadler From the Cover: Molecular transport through channels and pores: Effects of in-channel interactions and blocking PNAS, August 1, 2006; 103(31): 11446 - 11451. [Abstract] [Full Text] [PDF] |
||||
![]() |
G. Duret and A. H. Delcour Deoxycholic Acid Blocks Vibrio cholerae OmpT but Not OmpU Porin J. Biol. Chem., July 21, 2006; 281(29): 19899 - 19905. [Abstract] [Full Text] [PDF] |
||||
![]() |
T. A. Goetze, K. Philippar, I. Ilkavets, J. Soll, and R. Wagner OEP37 Is a New Member of the Chloroplast Outer Membrane Ion Channels J. Biol. Chem., June 30, 2006; 281(26): 17989 - 17998. [Abstract] [Full Text] [PDF] |
||||
![]() |
A. A. Sobko, E. A. Kotova, Y. N. Antonenko, S. D. Zakharov, and W. A. Cramer Lipid Dependence of the Channel Properties of a Colicin E1-Lipid Toroidal Pore J. Biol. Chem., May 19, 2006; 281(20): 14408 - 14416. [Abstract] [Full Text] [PDF] |
||||
![]() |
C. Danelon, E. M. Nestorovich, M. Winterhalter, M. Ceccarelli, and S. M. Bezrukov Interaction of Zwitterionic Penicillins with the OmpF Channel Facilitates Their Translocation Biophys. J., March 1, 2006; 90(5): 1617 - 1627. [Abstract] [Full Text] [PDF] |
||||
![]() |
M. Vrouenraets, J. Wierenga, W. Meijberg, and H. Miedema Chemical Modification of the Bacterial Porin OmpF: Gain of Selectivity by Volume Reduction Biophys. J., February 15, 2006; 90(4): 1202 - 1211. [Abstract] [Full Text] [PDF] |
||||
![]() |
S. Varma, S.-W. Chiu, and E. Jakobsson The Influence of Amino Acid Protonation States on Molecular Dynamics Simulations of the Bacterial Porin OmpF Biophys. J., January 1, 2006; 90(1): 112 - 123. [Abstract] [Full Text] [PDF] |
||||
![]() |
A. Aksimentiev and K. Schulten Imaging {alpha}-Hemolysin with Molecular Dynamics: Ionic Conductance, Osmotic Permeability, and the Electrostatic Potential Map Biophys. J., June 1, 2005; 88(6): 3745 - 3761. [Abstract] [Full Text] [PDF] |
||||
![]() |
S. D. Zakharov, V. Y. Eroukova, T. I. Rokitskaya, M. V. Zhalnina, O. Sharma, P. J. Loll, H. I. Zgurskaya, Y. N. Antonenko, and W. A. Cramer Colicin Occlusion of OmpF and TolC Channels: Outer Membrane Translocons for Colicin Import Biophys. J., December 1, 2004; 87(6): 3901 - 3911. [Abstract] [Full Text] [PDF] |
||||
| HOME | HELP | FEEDBACK | SUBSCRIPTIONS | ARCHIVE | SEARCH | TABLE OF CONTENTS |