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Biophys J, July 1998, p. 159-173, Vol. 75, No. 1
and
*Department of Physical Chemistry and the Fritz Haber Research
Center, The Hebrew University of Jerusalem, Jerusalem 91904, Israel,
and
Department of Chemistry and Biochemistry, University
of California Los Angeles, Los Angeles, California 90095 USA
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ABSTRACT |
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We develop a statistical thermodynamic model for the
phase evolution of DNA-cationic lipid complexes in aqueous solution, as
a function of the ratios of charged to neutral lipid and charged lipid
to DNA. The complexes consist of parallel strands of DNA intercalated
in the water layers of lamellar stacks of mixed lipid bilayers, as
determined by recent synchrotron x-ray measurements. Elastic
deformations of the DNA and the lipid bilayers are neglected, but
DNA-induced spatial inhomogeneities in the bilayer charge densities are
included. The relevant nonlinear Poisson-Boltzmann equation is solved
numerically, including self-consistent treatment of the boundary
conditions at the polarized membrane surfaces. For a wide range of
lipid compositions, the phase evolution is characterized by three
regions of lipid to DNA charge ratio,
: 1) for low
, the
complexes coexist with excess DNA, and the DNA-DNA spacing in the
complex, d, is constant; 2) for intermediate
, including
the isoelectric point
= 1, all of the lipid and DNA in solution is
incorporated into the complex, whose inter-DNA distance d
increases linearly with
; and 3) for high
, the complexes coexist
with excess liposomes (whose lipid composition is different from that
in the complex), and their spacing d is nearly, but not
completely, independent of
. These results can be understood in
terms of a simple charging model that reflects the competition between
counterion entropy and inter-DNA (
< 1) and interbilayer (
> 1)
repulsions. Finally, our approach and conclusions are compared with
theoretical work by others, and with relevant experiments.
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INTRODUCTION |
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It is difficult to imagine a biological structure
or process in which electrostatics do not play a significant role. This is because of the charge carried by virtually all proteins,
polynucleotides (e.g., DNA), and cell membranes. Accordingly, it is not
surprising that attempts to understand the interaction of specific
proteins with DNA, and with cell membranes, have inspired researchers
to focus a great deal of theoretical effort on practical ways of determining the distribution of mobile counterions and their consequent screening effects in aqueous solution (Honig and Nicholls, 1995
). Similarly, in recent discussions of liposomal vectors for gene delivery, i.e., targeting of extracellular DNA into cell nuclei, fundamental electrostatic issues arise immediately because of the
strong interactions between the DNA and cationic lipids used to complex
it (Felgner et al., 1987
, 1996
; Felgner and Ringold, 1989
; Gershon et
al., 1993
; Gustafsson et al., 1995
; Lasic et al., 1997
; Zuidam and
Barenholz, 1997
; Hui et al., 1996
; Mok and Cullis, 1997
).
A most compelling example is provided by the studies of Rädler et
al. (Rädler et al., 1997
; Salditt et al., 1997
), who report the
existence of highly novel DNA-cationic liposome complexes, as
determined by high-resolution synchrotron x-ray diffraction and optical
microscopy. In particular, the lipoplex is shown to consist of
multilayer lamellar stacks of charged bilayer, each consisting of a
mixture of charged DOTAP (dioleoyltrimethylammonium-propane) and
neutral DOPC (dioleoylphosphatidylcholine) lipid, with the parallel DNA
strands intercalated between.
Quite different morphologies are expected to arise for other choices of
neutral ("helper") lipid; in the case of DOPE
(dioleoylphosphatidylethanolamine), for example, inverted hexagonal
("honeycomb") organization of the lipid, with single strands of DNA
in aqueous solution regions, is implicated (Felgner et al., 1987
;
Tarahovsky et al., 1996
). "Spaghetti" structures have also been
reported, in which each DNA strand is coated by a cylindrical bilayer
of the cationic/neutral lipid mixture (Sternberg et al., 1994
;
Sternberg, 1996
). Both of these honeycomb and spaghetti-like structures
have recently been investigated theoretically (May and Ben-Shaul, 1997
;
Dan, 1998
).
In the present paper we treat in detail the electrostatics and
self-assembly characteristics of the multibilayer lamellar stacks of
intercalated DNA, structures that we shall refer to henceforth as
L
c complexes (see Fig.
1). We address them within the general
context of the statistical thermodynamics of aqueous solutions of DNA and mixtures of neutral and cationic lipids (see Theory). Mobile counterions are described by the nonlinear Poisson-Boltzmann (PB) equation, which is solved numerically. Although we neglect elastic deformations of the DNA strands and bilayers, we do allow for the
possibility of spatial inhomogeneities in the membrane surface charge
density, in response to interactions with the anionic DNA. This effect
turns out to be significant, and reflects the "extra" degree of
freedom associated with cationic lipids in mixed, fluid bilayers. In solving the PB equation, then, we need to treat the (Gauss
law) boundary conditions at the membrane surface in a fully self-consistent way, because the charge density there varies along the
direction normal to the DNA strands, and does so in a way that depends
on the distribution of counterions (electrostatic potential), which in
turn depends on the charge at the surface. We do this in the Results
section for a wide range of DNA-DNA spacings, overall lipid
composition, and added salt concentrations. We then determine the phase
evolution of the system by calculating free energies and solving the
equations that express equilibrium between the L
c
complex and, alternately, excess DNA and excess lipid. In this way we
establish how DNA-DNA spacings d vary with the ratio
of
charged lipid to DNA, for each of several different lipid compositions (ratio of neutral to cationic lipid). In agreement with experiment, we
find that for a lipid mixture of given composition, the spacings are
constant throughout the low
range, where the complex coexists with
excess DNA. In the high
range, where the complex coexists with
excess lipid, the spacings are nearly constant as well. Throughout the
"single-phase" region, however, where all of the DNA and lipids are
accommodated by the complex, the DNA-DNA spacings increase linearly
with
, as implied by material conservation. This region is found to
include the special ("isoelectric") point at which the total
charges carried by DNA and lipid are equal. Moreover, at the
isoelectric point the free energy of the complex is minimal.
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All of the above results can be qualitatively accounted for by a simple
model described in the Discussion, in which the electrostatic effects
enter only via the "excess charge" that measures the extent of
deviation from the isoelectric point. In this way one can understand the constancy of DNA-DNA spacings at low and high
, i.e., at large
deviations from the isoelectric point, directly in terms of the mutual
repulsions between like-charged DNA strands or lipid bilayer surfaces,
respectively. We include in the final section a brief account of the
theory of the L
c complex presented independently by
Bruinsma (1998)
, who interprets the observed structural evolution
(d versus
) via approximate analytical solution of the
nonlinear PB theory. His analysis of the free energy (which is
restricted to low cationic lipid contents) is based on a physical
picture that is quite similar to ours; his conclusions regarding the
phase evolution of the system are somewhat different. We also discuss
there the quite different approach suggested by Dan (1996
, 1997
), who,
in contrast, ascribes the preferred d spacing at low
to
a competition between short-range electrostatic repulsions and
longer-ranged DNA-DNA attractions mediated by the elastic deformation
of the bilayer membranes.
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THEORY |
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In this section we outline our model for calculating the free
energy of the L
c complex, and derive the
thermodynamic relationships dictating the complex structure and phase
behavior in lipid-DNA solutions, as a function of the overall
lipid-to-DNA ratio and the cationic/neutral lipid composition.
Model
Ignoring edge effects, we shall treat the complex as an infinite
periodic lamellar array consisting of alternating lipid bilayers and
DNA monolayers, as schematically illustrated in Fig. 1. The DNA strands
are assumed to be infinite, parallel, and equidistant rigid rods, thus
forming a one-dimensional (1D) lattice. As noted in the previous
section, the existence of a well-defined interaxis distance
d (which depends on lipid composition and lipid-to-DNA ratio) has been unequivocally confirmed by x-ray diffraction studies (Rädler et al., 1997
). Theoretical support for this finding will be given in the following sections. The naked DNA strands in solution will be treated as infinite cylindrical rods, and the liposomal membranes as perfectly planar infinite bilayers.
In modeling the DNA strands as infinite rods, we ignore the effects
associated with their flexibility, in particular curvature fluctuations
and undulation forces (Podgornik et al., 1989
, 1994
; Strey et al.,
1997
). This approximation is justified in view of the fact that the DNA
persistence length (
500 Å) is significantly larger than all of
the other relevant length scales in the L
c complex,
namely, the DNA radius R
10 Å, the interaxial
distance d
20-70 Å, the thickness of the
interbilayer water gap h
25 Å, the bilayer
thickness w
30 Å, and the average linear dimension of a lipid headgroup a1/2, where a
70 Å2 is the average cross-sectional area per
lipid molecule in the membrane. It should be noted that any curvature
fluctuation of an individual DNA strand within the monolayer implies a
change in d extending over a distance of order
. From the
calculations presented in the next section, it will become apparent
that such changes involve an electrostatic free energy penalty of
several kBT's, indicating that
curvature and interaxis fluctuations in the complex are rather small
(kB is Boltzmann's constant and T is
the absolute temperature).
Another assumption that will be made in this work is that the lipid
bilayers are perfectly planar, and their thickness, w, is
constant and independent of their lipid composition. In general, one
cannot exclude the possibility of membrane curvature modulations induced by the DNA lattice (as schematically illustrated in Fig. 1).
For lipid bilayers of high bending rigidity (Helfrich, 1973
), these
modulations are expected to play a minor role in determining the
complex stability. On the other hand, when "soft" bilayers are
involved in complex formation, these curvature modulations may become
increasingly important, possibly leading to structural phase
transformations involving, say, the inverted hexagonal/honeycomb states
mentioned in the Introduction. The assumption of constant w
is justified for bilayers whose cationic and neutral lipid components are of similar chain length. This is the case for the neutral lipids
DOPC and DOPE, as well as the cationic lipid DOTAP, mixtures of which
are known to form lamellar complexes with DNA (Rädler et al.,
1997
). The extension of our model to cases where w varies with the lipid composition is, in principle, straightforward.
The negative charges on the DNA surface are densely spaced; the average
spacing between these charges along the axis of B-DNA is l = 1.7 Å. We shall assume that these charges form a continuous and
uniform charge distribution over the DNA surface, which will be
regarded as a perfect cylindrical envelope. This approximation is
supported by numerical studies revealing that the electrostatic potential around the DNA surface is not different from that produced by
a continuous charge distribution, except for a narrow region in its
immediate vicinity (Wagner et al., 1997
). In all of our calculations,
we shall use R = 10 Å for the radius of this cylinder, implying a uniform charge density 
= e/2
Rl
0.15 Cm
2, corresponding,
approximately, to one elementary charge, e, per 110 Å2.
We shall also assume that the cationic and neutral lipids constituting
the membrane are ideally mixed. In the free bilayer this implies, on
average, a uniform and continuous charge distribution. The charge
density is
+ = e
/a, where
is the mole
fraction of the cationic lipids and a is the average area
per lipid headgroup. On the other hand, in the bilayers of the complex
we shall allow for spatial modulations of the cationic charges, while
assuming that ideal mixing applies locally. In all
calculations we shall use a = 70 Å2
(implying 
=
+ when
0.65) for
both lipid components, in both the free and the complexed bilayer.
Finally, the naked DNA, the free lipid bilayer, and the lipid-DNA complex will be treated as macroscopic phases, i.e., we ignore the free energy contributions associated with their overall translational and rotational degrees of freedom. These free energies are on the order of 1kBT per particle, much less than their "internal" (electrostatic and mixing) free energies.
Free energies
We define a unit cell of a complex as a rectangular box of dimensions d × b × s, where d is the distance, along the x axis, between two neighboring DNA strands; b = h + w is the distance between two bilayer midplanes along the y axis; and s is the "depth" of the unit cell along the z (the DNA axis) direction. Because the complex is translationally invariant along the z axis, the calculation of the complex free energy is a 2D problem, and the choice of s is arbitrary (Fig. 2). Our numerical results will be reported for s = 1 Å. For the numerical evaluation of the complex free energy, it is convenient to consider only one-quarter of a unit cell, as shown in Fig. 2.
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Formation free energy
Let fC = fC(
,
d, h) denote the free energy of one unit cell of the
complex, where
=
C is the average mole fraction of the cationic lipid in the complex. Alternatively, we may interpret fC as the free energy of a DNA strand (of length
s), when incorporated in a complex characterized by
C, d, h plus the free energy of a complexed
bilayer segment containing n = 2s × d/a lipid
molecules. In the limit d
, h
, the
complex disintegrates into well-separated DNA and lipid bilayer. Thus
fC(
, d
, h
) = fD + fB(
) = fD + d
B(
). Here
fD is the free energy of a naked DNA rod of length s, and fB(
) is the free
energy of a bare bilayer segment of area s × d;
B(
) = fB(
)/d may be interpreted as the
free energy per unit length of a bilayer strip of width s.
(fB/n = (a/2s)
B is
the free energy per lipid molecule in the bilayer.) Conversely, the
difference
|
(1) |
, d, and h is
thermodynamically stable only if
fC < 0. We
now turn to a more detailed discussion of the terms appearing on the
right-hand side of Eq. 1.
Complex
As we do not allow for curvature or thickness modulations of the lipid layers, fC involves only two contributions: the electrostatic (charging) free energy of the complex and the (in-plane) lipid mixing entropy. Although, locally, the two lipid components are ideally mixed, the presence of the negatively charged DNA grid can induce a spatial modulation (or "polarization") of the cationic lipid charges (along the x axis), to minimize the electrostatic energy of the system. However, this tendency is opposed by the lipid "demixing" entropy penalty associated with any deviation from a uniform distribution. The extent of lipid demixing (charge modulation) is governed by a delicate interplay between these two opposing tendencies. That is, the electrostatic and lipid mixing contributions to the complex free energy are strongly coupled. Thus the lipid composition profile
(x), the electrostatic potential in the complex
interior
(x, y), and the actual value of the complex's free energy, fC(
, d, h), must be
determined by minimizing the total free energy functional, which
includes both the mixing and electrostatic terms, namely,
|
(2) |
|
= e
/kBT
is the scaled (dimensionless) electrostatic potential; and
=
0
r, where
r is the
dielectric constant of the solution and
0 is the
permittivity of vacuum (Verwey and Overbeek, 1948
r = 78 for the
aqueous regions, and assume
= 0 in the interior of the DNA and the
lipid membrane. The second term accounts for the translational
("mixing") entropy of the mobile ions in the complex interior,
relative to their entropy in the bulk solution, with
n+ = n
= n0,
n± = n± (x, y) denoting the local
concentrations of mobile ions in the complex. (We assume a 1:1
electrolyte solution.) The last term accounts for the mixing entropy of
the charged and neutral lipids in the membrane plane. The integration
is over the membrane surface (surface V in Fig. 2). Locally, i.e., at
any x, the lipids are assumed to be ideally mixed, with
=
(x) denoting the local mole fraction of the charged
lipid. (Recall that the average area per lipid in the membrane is
assumed to be independent of the lipid composition.) The local lipid
composition must satisfy the conservation constraint
|
(3) |
is the mean mole fraction of the charged lipid in the
complex.
Functional minimization of fC with respect to
n+, n
and
, subject to the
conservation constraint (Eq. 3), yields the following results. For the
mobile ion distributions, one finds the usual Boltzmann distributions,
n± = n0 exp(
), which upon
substitution into Poisson's equation, yield the PB equation,
|
(4) |

1 = (
0
rkBT/2n0e2)1/2
lD is the Debye length.
For
+(x) = e
(x)/a, the local charge
density on the membrane, we obtain
|
(5) |
= a
kBT/e2,
is the Lagrange
multiplier conjugate to the charge conservation constraint (Eq. 3), and
is the unit vector normal to the boundary (pointing
into the dielectric medium). The second equality in Eq. 5 is Gauss'
equation, relating the local surface charge density at x to
the electrostatic potential at the membrane surface. This equation
represents one of the boundary conditions (boundary V in Fig. 2) on the
electrostatic potential and must be solved simultaneously, and
self-consistently, with the PB equation (Eq. 4). Note that for our
model of the L
c complex, both equations are 2D.
The other boundary conditions, pertaining to domain boundaries I-IV in
Fig. 2, are less intricate. At the DNA surface (domain boundary III),
the boundary condition is that of constant charge density,


·
= e
/
0
rkBT.
For domain boundaries I, II and IV we have, by symmetry, 
/
x|I = 0, 
/
y|II = 0, 
/
x|IV = 0. The numerical procedure for solving the PB equation (Carnie et al., 1994
,
and the
free energy of the complex is outlined in the Appendix.
Bare bilayer, naked DNA
The free energy of the bare bilayer is a sum of mixing and electrostatic contributions, fB = fBm +fBe, both depending on the lipid composition
. (By symmetry, at equilibrium, the bilayer is planar
and the lipid compositions in its two monolayers are identical.) The
mixing entropy contribution (per unit length of a bilayer strip of
width s) is
|
(6) |
Be we can use a
closed-form expression for the electrostatic free energy of a charged
planar surface (Lekkerkerker, 1989
|
(7) |
lB
/(
a)
and q =
;
lB
e2/(4
kBT)
is the Bjerrum length (in water at room temperature lB = 7.14 Å). Note that, with the
identification of lC
e/2
lB as the Gouy-Chapman length
(
= e
/a), and lD

1 as the Debye length, p is recognized to
be the ratio of fundamental lengths, p = lD/lC.
In Fig. 3 we show the bilayer free energy
per molecule, fB/n = (fBm + fBe)/n, as a function of
the lipid composition,
B, for two values of the Debye
length, lD = 50 Å and 10 Å. It should be
noted that the electrostatic (charging) energy is a monotonically
increasing function of
B; the shallow minimum of
fB at small
B is due to the lipid
entropy contribution,
Bm
(whose minimum is at
B = 1/2). Also shown in this figure
is (the constant) energy for charging a naked DNA of length
a/2
R, corresponding to a DNA surface area of a = 70 Å2. This energy is calculated by the numerical
solution of the (1D) PB equation for an isolated charged cylinder in
aqueous electrolyte solution. The results shown in Fig. 3 will later be
used for calculating the lipoplex formation free energy and the phase
diagram of the system.
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Phase behavior
Consider an aqueous solution containing DNA strands of total
length sD, N+ cationic lipids, and
N0 neutral (helper) lipids; N+ + N0 = N. The total length of DNA associated in
complexes will be denoted as sDC,
(DC
D). Note that
DC is also the number of unit cells in the
complex. The length distribution of the DNA strands is irrelevant, as
both the naked DNA and the complex are treated as (immobile)
macroscopic phases.
As the concentration of monomeric lipids in solution is generally
negligible, we can safely assume that all lipids are organized in
bilayers which, in both the free and complexed states, are assumed to
be planar. We find it convenient to express the total bilayer area,
A = Na, in the form A = sL, so that
L is the total "length" of the bilayer, if regarded as a
strip of width s. We shall use LC =
L and LB = (1
)L to denote the total length of the complexed and free
bilayer, respectively. Note that LC = dDC, where d is the distance between
DNA strands in the complex. Also, using NC+
to denote the number of cationic lipids in the complex, we define LC+ = (a/s)NC+.
Similarly, we define LB+ = (a/s)NB+, LC0 = (a/s)NC0, LB0 = (a/s)NB0 and LC+ + LB+ = L+,
LC0 + LB0 = L0. The mole fractions of cationic lipid in the
complexed and free bilayer are given by
C = NC+/NC = LC+/LC and
B = NB+/NB, respectively.
These two lipid compositions are generally different, but related to
each other by the conservation condition ("lever rule")
|
(8) |
N+/N = L+/L is the overall mole fraction of cationic lipid in
solution.
Finally, we introduce the (dimensionless) quantity
|
(9) |
= 1. Experiment shows (at least for m
0.5) that at this point all
of the lipids and DNA in solution are involved in complex formation
(Rädler et al., 1997Experiment also shows that upon increasing the overall lipid-to-DNA ratio (L/D), at constant lipid composition (m), the system evolves through three distinct regions:
| 1. | When L/D (equivalently, L/D)
is small, the system is biphasic; the solution contains lipid-DNA
complexes that coexist with excess, naked DNA. Thus, in this region,
D > DC, whereas LC = L (no free bilayer). The DNA-DNA distance in the complex is constant, d = d1(m), independent of as long as 1(m), which marks the onset
of the next region. Once = 1, all of the DNA is
complexed, so that DC = D = L/d1, and hence, from Eq. 9, 1 = md1(l/a). In general, 1 < 1.
|
| 2. | Between 1 and a certain 2 = 2(m) > 1, the system is one-phasic: all of
the DNA and lipid is involved in complex formation. Thus,
LC = L, DC = D, and hence d = L/D = (a/l)( /m)
increases linearly with the lipid/DNA ratio, from
d1 at 1, through
dI = dI(m) = (a/l)/m at the isoelectric point ( = 1), to
d2 = d2(m) at
2(m) = md2(l/a), which marks the
onset of the third region. In general, 2 > 1.
|
| 3. | For large L/D ( > 2) the system
is again biphasic, containing complexes that coexist with an excess
bilayer phase, DC = D, LC < L. In this region the system possesses an extra
thermodynamic degree of freedom, namely, the lipid composition of the
complex, C (or, equivalently, B, which is
related to C by Eq. 8). Thus, unlike in region 1, C (hence B) need not be equal to
m. In other words, for any m and L/D,
the system will adjust both d and C so as to
minimize its total free energy. Indeed, we shall see that in the excess
bilayer region, both C (hence B) and
d vary with . It should be noted, however, that
experimentally, d d2(m) appears to be
independent of in region 3. This result will be discussed in more
detail in the next section.
|
In principle, the system may also exhibit three-phase (complex/bilayer/DNA) coexistence as well as bilayer/DNA coexistence. However, these conditions correspond to very narrow regions of the phase diagram (low m values), where the complexes are either unstable or only marginally stable. We shall thus focus on the three-stage scenario outlined above.
Our analysis involves three possible phases: free DNA, free bilayer,
and complex. The first two may be regarded as incompressible condensed
phases. On the other hand, the complex is "compressible" because
both the DNA-DNA spacing, d, and the interbilayer spacing, h, may vary with m and L/D. However,
both experiment and our calculations (next section) show that in
general, only d varies significantly with m and
L/D, whereas h is essentially constant,
h
h*. In other words, for most
C and
d, the complex free energy
fC(
C, d, h) has a
narrow and deep minimum at h*. Thus we can safely treat
fC = fC(
C,
d) = fC(
C, d,
h = h*) as a function of only two variables.
For given m and L/D (and given lD), the number and nature of the phases in solution are determined by the minimum of the total free energy,
|
(10) |
C (
B depends on these three variables
through Eq. 8).
Setting DC = L/d,
C = m in Eq. 10, and minimizing F with respect to
d, we find the equilibrium condition for region 1,
|
(11) |
fC(m, d) > 0, which means
(
fC/
d)d=d1 < 0. Physically, the "overcrowding" (d1 < d*) of DNA strands in the complex results from the partial release
of mobile counterions into solution upon bringing more DNA charges into
contact with the cationic lipid charges. When d = d1, this "overcharging" of the complex by DNA is
balanced by DNA-DNA repulsion within the complex (the latter of which
increases as d decreases).
In region 2, where all of the DNA and lipids are associated in
complexes, F = DfC(m, d), and
d = L/D increases linearly with the lipid-to-DNA ratio.
(The linear increase reflects our assumption that the bilayer is planar
and laterally incompressible.) At some point within this region,
generally very close to
= 1, the complex free energy is minimal
(i.e., dI(m)
d*(m)). The uptake
of bilayer into the complex continues beyond this point, as long as the
added lipids enjoy lower free energy in the complex as compared to that in the free bilayer. Eventually, at some d = d2(m) > d* (and
=
2(m) > 1), interbilayer repulsion becomes sufficiently large to forbid
further accommodation of bilayer in the complex, marking the onset of
region 3. To support this qualitative description, let us first
consider the hypothetical case of "blocked lipid exchange," where
B =
C = m. (This limit could
perhaps be realized experimentally, as a transient state, if the rate
of lipid exchange is small compared to that of complex formation.)
Setting DC = D,
C =
B = m in Eq. 10, and minimizing
F with respect to d, we find
|
(12) |
2(m) for the case of blocked exchange. For this
special case, let
2(m) denote the value
of
at the boundary between regions 2 and 3, corresponding to
= dD/L = 1 in Eq. 8. From Eq. 12 it follows that
d =
2(m) is constant throughout
region 3 (
>
2(m), or 1 >
> 0). Because
2(m) is also the
maximum d in region 2, it follows that
2(m) = m
2(l/a). Finally, because the bilayer charging energy,
B(m), is positive, it follows
from Eq. 12 that
2 > d*.
In the more general case of free lipid exchange, the values
of d,
C, and
B in the
bilayer-complex coexistence region are determined by the equilibrium
conditions (
F/
d) = 0 and
(
F/
C) = 0. Noting that in this region
DC = D and
(dD/L)
C + (1
dD/L)
B = m (see Eq. 8), we obtain
|
(13) |
|
(14) |
C
fC/d, the free energy per unit length of the complex, instead of fC, the free energy
per unit cell. Then, if d were constant ("incompressible
complex"), Eqs. 13 and 14 would reduce to the familiar "common
tangent construction" for
C and
B, representing the coexistence
conditions of two incompressible binary mixtures. If this were the
case, we would also find that
C and
B are
independent of
. However, because the complexes are not
incompressible, both d and
C (and hence also
B) may vary with
, as will be shown in the next
section.
| |
RESULTS AND ANALYSIS |
|---|
Following the discussion in the previous section, we shall first
present and analyze the numerical results for the free energy and
structure of an isolated DNA-lipid complex and then discuss the phase
behavior of the solution. Comparison with detailed published data for
L
c complexes is possible for only one kind of
system: a solution containing an equimolar (m = 0.5)
mixture of cationic (DOTAP) and nonionic helper (DOPC) lipids and
linear (either
-phage or plasmid) DNA, without added salt
(Rädler et al., 1997
). The bulk concentration of mobile ions in
this system is low, but the exact concentration is unknown (as it is
volume dependent). Thus, in most calculations, we have used
n0
4 × 10
3 M,
corresponding to a Debye length lD = 50 Å.
Very similar properties and phase behavior of the complex were found
for larger values of lD. Partial results will
also be presented for lD = 10 Å, corresponding to physiological salt concentrations (n0
0.1
M). In all of the calculations reported below, we have used
R = 10 Å for the DNA radius and a = 70
Å2 for the average area per (both cationic and neutral)
lipid headgroup.
Complex structure and stability
The electrostatic (charging) free energy per unit cell of the
complex, fC, is shown as a function of
d for several values of
C in Fig.
4 (for s = 1 Å,
lD = 50 Å). Similarly, Fig.
5 shows fC as a
function of
C for several values of d.
|
|
All of the results shown in Figs. 4 and 5 were obtained using
h = h* = 26 Å, corresponding to a minimal distance of
3 Å between the DNA and bilayer surfaces. This is the value of
h* observed experimentally for the L
c
complex by Rädler et al. (1997)
. It should be noted, however, that h* is larger than the minimal value of the interbilayer
spacing, hmin = 2R = 20 Å. In
fact, for most values of
C, our calculations show that
the electrostatic free energy of the complex decreases monotonically as
h decreases, including the region h* > h > hmin. Thus we treat h*
26 Å as the
effective range of a "hard-wall" potential, representing the
short-range repulsive forces arising from hydration, protrusion, and
other excluded volume interactions (Israelachvili, 1992
; Israelachvili
and Wennerström, 1990
). Subject to this condition, we find that
for all
C larger than ~0.2, the minimum in
fC(
C, d, h) is always
at h = h*, regardless of d. For very low
values of
C (less than 0.2), we find, for low
d's, that the optimal value of h increases as
d decreases, as demonstrated for
C = 0.15 in
the inset to Fig. 4. Note, however, that for these low
C's, the minimum of fC occurs at
large d*'s, where again, h = h*. More
generally, our conclusions regarding the complex structure and
stability or the phase behavior of the system are not sensitive to
small variations in h*.
In Fig. 4 we see that the optimal DNA spacing in the complex,
d*, is a decreasing function of
C. Similarly,
Fig. 5 shows that the optimal complex composition
*C is a decreasing function of the DNA-DNA
distance.
Qualitatively, these results are easily understood. The minima in the
electrostatic free energy are expected to occur when the fixed negative
charges on the DNA surface are balanced by the same number of positive
charges on the bilayer surface, i.e., at the isoelectric point. At this
point, the complex will remain electrically neutral, even if all of the
mobile ions in its interior would be released into the bulk solution,
thus increasing their translational entropy and consequently lowering
the free energy of the system. Of course, some counterions will always
remain within the complex water gaps, as dictated by the bulk value of their chemical potentials. However, the concentrations of these mobile
ions will be much smaller than in the diffuse layers near the surfaces
of the noncomplexed DNA and membrane. Now the total charge on the
bilayer surface is proportional to d ×
, whereas the total charge on the DNA surface is
constant. Thus, at the isoelectric point
dI(
C) = (a/l)/
C, explaining the decrease in dI
d* with
C. The inset to
Fig. 5 shows how dI and d* vary with
C. The two curves are essentially identical, confirming that the complex free energy is, indeed, minimal at the isoelectric point. Thus, hereafter, we set dI
d*.
Figs. 4 and 5 also reveal that the minimum value of the complex free
energy f*C
fC(
C,
d*(
C)) varies rather weakly with
C. More generally, we note that as
C (or
d) is changed, the complex can change its d (or
C), i.e., "cross" to a neighboring
free energy curve, without significantly changing its free energy. This
ability of the complex to change its composition (and d) at
minimal free energy cost is manifested when complexes coexist with an
excess bilayer phase, in which case
C and
B are determined by the minimum of F (rather than fC), as will be demonstrated in the next
section (Phase evolution).
Based on the numerical results for fC, we can
estimate the amplitude of interaxis fluctuations,
d = [
(d
d*)2
]1/2. Imagine that
one DNA strand, say of length
500 Å, is displaced toward one
of its neighbors by a distance
d, thus creating two unit
cells of dimensions d = d* ±
d. Allowing the lipid
composition in the new unit cells to relax (implying 
=
(
d/d*)), the free energy cost of this fluctuation is
f =
[f*C(d
d) + f*C(d +
d)
2f*C(d)] =
(
2f*C/
d2)(
d)2.
We find that
f
1 kBT for
d
|
d|
1 Å.
When d < d*, there is a net negative surface charge on the complex "walls." To ensure electrical neutrality, positive mobile ions must be brought from the bulk solution into the confines of the complex, thus increasing the free energy of the system. As d decreases, the excess concentration of positive counterions increases, for two reasons: the increase in the excess surface charge and the decrease in the inner complex volume. The concomitant increase in the free energy of the complex, and hence the effective DNA-DNA repulsion, is due to the excess charging energy of the DNA surfaces, and the increased osmotic pressure of the counterions within the complex interior. (A simple electrostatic model accounting for this behavior will be described in the Discussion.)
Similarly, as d increases above d*, negative
mobile ions must be brought into the complex to balance the excess
positive charge on the (lipid bilayer) surfaces. However, unlike in the
d < d* region, where counterion confinement depends
strongly on d, in this region counterion confinement is
mainly due to the finite bilayer spacing h. Because
h is constant, fC is expected to
increase linearly with d (in the large
d region), as is indeed observed in Fig. 4. The rate of this
increase, i.e.,
fC/
d, is
proportional to the electrostatic free energy per unit area of the
bilayer in the complex. This free energy is a sum of the bilayer
charging energy, which increases with
C (see below) and
the interbilayer repulsion energy. For most values of
C
considered here, the complex conditions are those of the
"Gouy-Chapman regime" (Andelman, 1995
), where the interbilayer
interaction energy is independent of the surface charge density. Thus
the
C dependence of the asymptotic slope of
fC in Fig. 4 is mostly due to the charging
energy of the lipid monolayers.
These notions are confirmed in Fig. 6,
which shows the formation free energy of the complex,
fC, as a function of d for several values of
C. Note from Eq. 1 that this quantity, which
represents the net stabilization energy of the complex, is obtained
from fC after subtracting the charging energy of
the noncomplexed DNA and bilayer. Thus the steep variation of
fC at small values of d is
dominated by the strong DNA-DNA repulsion (counterion confinement) in
this regime. Similarly, the increase in
fC at
high d's (d
d*) is due almost
exclusively to interbilayer repulsion. From the discussion above it
follows that in this region

fC/
d should be nearly
independent of
C, as confirmed by Fig. 6.
|
From the results in Fig. 6 we also conclude that stable complexes
(
fC < 0) can be formed for a wide range of
lipid compositions. The complex stabilization energies are on the order
of a few kBT's per unit cell. For a
"mesoscopic" complex, containing DNA strands of total length on the
order of, say, 1 µm, this implies a total stabilization energy on the
order of 104 kBT.
In the previous section we emphasized the fact that the lateral
distribution of the cationic lipid charges in the complex need not be
uniform. Indeed, we find that the actual charge distribution is
polarized, reflecting a compromise between the tendency to minimize the
electrostatic energy on the one hand, and the unavoidable demixing
entropy penalty on the other hand. The extent of spatial charge
modulations in the complex is demonstrated in Fig.
7. The figure shows the variation in the
local charge density
(x) between two neighboring DNA
strands, for complexes of three lipid compositions (high, low, and
equimolar
C = 
(x)
), all at their
isoelectric (i.e., optimal) value of d.
|
When
C is low, d* is necessarily large. To
effectively screen the negative DNA charges, cationic lipids must be
displaced over a relatively large distance, resulting in a dramatic
charge modulation. On the other hand, when
C is large,
d is small, and the charge segregation is rather weak. In
fact, in this case some of the charged lipids are shifted from the
immediate vicinity of the DNA toward the center of the unit cell, as
their optimal local concentration near the DNA strands is lower than
C. (Recall that the charge density on the DNA surface
corresponds to one elementary charge per ~110 Å2. The
average charge density on the bilayer surface is
C/a, which, for
C = 0.78, corresponds to one elementary charge per ~90 Å2.)
Intermediate though substantial charge modulation is found for the
equimolar lipid mixture,
C = 0.5. For this system we also show, for comparison, the charge density profile in the
hypothetical case in which lipid segregation does not involve a
demixing entropy penalty. (Namely, we artificially ignore the lipid
mixing entropy contribution to fC. The PB
equation is then solved subject to the condition of constant electrical
potential on the bilayer surfaces, as if they were conducting sheets.)
As expected, the charge modulation in this system is still more
dramatic than in the "real" complex.
Phase evolution
In Fig. 8, A and
B, we show how d, the DNA-DNA spacing in the
complex, varies with
= m(l/a)L/D, the (scaled)
charged-lipid to DNA ratio in solution. The d
plots in Fig. 8 a were calculated for a solution of low salt
content, lD = 50 Å, and several different lipid compositions m. Similar calculations are shown in Fig.
8 b for lD = 10 Å.
|
These calculations provide the most critical test of our model, because
d is an experimentally measurable quantity. The experimental d
data points of Rädler et al. (1997)
,
which were obtained for an equimolar lipid mixture (m = 0.5) and without added salt, are shown in Fig.
9. Also shown in this figure are the
theoretical curves corresponding to lD = 10 Å and 50 Å, both for m = 0.5. The low-salt
(lD = 50 Å) results show reasonable agreement
with the experimental data. The inset to Fig. 9 shows how the
(calculated) lipid compositions in the complex and free bilayer (in the
"excess bilayer" regime) vary with the charged lipid-to-DNA ratio.
|
The d
"phase diagrams" in Figs. 8 and 9 were
calculated using Eq. 11 for region 1 (excess DNA), and Eqs. 13 and 14
together with the lever rule (Eq. 8) for region 3 (excess bilayer).
Equation 11 yields d1 = d1(m) for
the complex-DNA coexistence region 1, 0
1(m) = md1(l/a). In the one phase
(complex) region 2, d = L/D = (a/l)(
/m) varies
linearly with
. The slope,
d/
, in region 2 is
inversely proportional to the charged lipid mole fraction,
m.
For region 3 the calculation is a little more complicated because of
the additional lipid composition degree of freedom. For each value of
m, the solution of Eqs. 13, 14, and 8 yield d,
C,
B as a function of 