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Biophys J, September 1998, p. 1340-1353, Vol. 75, No. 3
*Department of Biophysical Chemistry, The kinetics of Na+-dependent partial
reactions of the Na+,K+-ATPase from rabbit
kidney were investigated via the stopped-flow technique, using the
fluorescent labels
N-(4-sulfobutyl)-4-(4-(p-(dipentylamino)phenyl)butadienyl)pyridinium inner salt (RH421) and 5-iodoacetamidofluorescein (5-IAF). When covalently labeled 5-IAF enzyme is mixed with ATP, the two labels give
almost identical kinetic responses. Under the chosen experimental conditions two exponential time functions are necessary to fit the
data. The dominant fast phase, 1/ The enzymatic mechanism of
Na+,K+-ATPase is often described by the
so-called Albers-Post model (Albers, 1967 Recently, however, the Albers-Post model has increasingly been subject
to criticism. It has been suggested that further enzyme conformations
are present, and even among research groups favoring the Albers-Post
formalism, widely varying rate constants have been proposed for the
same individual partial reactions. The situation is particularly
confusing in the case of the Na+-related reactions of the
pump cycle. As pointed out by Forbush and Klodos (1991) Since then it has been found (Frank et al., 1996 Concerning the discrepancies in the rate constants of individual
partial reactions reported in the literature, it is important to point
out the different methods used to add ATP to the enzyme. Whereas some
groups have added ATP simply by rapid mixing (Steinberg and Karlish,
1989 The aim of the present paper is, therefore, fourfold: 1) to compare
kinetic data previously obtained with pig kidney enzyme (Kane et al.,
1997 With respect to aim 3), it should be pointed out that the faster of the
two exponential phases could already be confidently attributed to
phosphorylation of the enzyme and its subsequent conformational change
(E1 N-(4-Sulfobutyl)-4-(4-(p-(dipentylamino)phenyl)butadienyl)-pyridinium
inner salt (RH421) and 5-iodoacetamidofluorescein (5-IAF) were obtained
from Molecular Probes (Eugene, OR) and were used without further
purification. RH421 was added to
Na+,K+-ATPase-containing membrane fragments
from an ethanolic stock solution. The dye is spontaneously incorporated
into the membrane fragments. P3-1-(2-Nitrophenyl)ethyl ATP,
tripropylammonium salt (NPE-caged ATP), was prepared as described
previously (Fendler et al., 1985 Na+,K+-ATPase-containing membrane fragments
were prepared and purified from the red outer medulla of rabbit kidney
according to procedure C of Jørgensen (1974a Labeling of the enzyme with 5-IAF was performed by incubating 200-300
µg of the enzyme for 48 h at 4°C with a solution containing 100 µM 5-IAF, 20 mM KCl, 20 mM MgCl2, 1 mM EDTA, and 30 mM imidazole (Kapakos and Steinberg, 1982 Stopped-flow experiments were carried out using an SF-61 stopped-flow
spectrofluorimeter from Hi-Tech Scientific (Salisbury, England). The
solution in the observation chamber was excited with a 100-W short-arc
mercury lamp (Osram, Germany), and the fluorescence was detected at
right angles to the incident light beam with an R928 multialkali
side-on photomultiplier. The exciting light was passed through a
grating monochromator with a blaze wavelength of 500 nm. In the case of
experiments using RH421, the mercury line at 577 nm was used for
excitation, and the fluorescence was collected at wavelengths The kinetics of the Na+,K+-ATPase
conformational changes and ion translocation reactions were
investigated in the stopped-flow apparatus by mixing
Na+,K+-ATPase labeled with either RH421 or
5-IAF in one of the drive syringes with an equal volume of an ATP
solution from the other drive syringe. The two solutions were prepared
in the same buffer (composition given below), so that no change in the
Na+ concentration occurred on mixing. In the case of
experiments performed to test the effect of NPE-caged ATP on the
observed kinetics, the enzyme was equilibrated for ~10 min with the
NPE-caged ATP before mixing with ATP. The solutions in the drive
syringes were equilibrated to a temperature of 24°C before each
experiment. The drive syringes were driven by compressed air. The dead
time of the stopped-flow mixing cell was determined to be 1.7 (± 0.2) ms. The electrical time constant of the fluorescence detection system
was set to a value of not less than 10 times faster than the relaxation
time of the fastest enzyme-related transient, i.e., from 0.33 ms for
RH421 measurements at saturating ATP and Na+ concentrations
down to 3.3 ms in the case of measurements in the absence of
Mg2+ ions. Interference of photochemical reactions of the
fluorescence probes with the kinetics of
Na+,K+-ATPase-related fluorescence transients
was avoided by inserting neutral density filters in the light beam in
front of the monochromator. The kinetics of conformational changes of
unphosphorylated enzyme were investigated in the stopped-flow apparatus
by mixing Na+,K+-ATPase labeled with RH421 with
an equal volume of 130 mM NaCl containing varying concentrations of
Na2ATP. Both the enzyme suspension and the
NaCl/Na2ATP mixtures were prepared in a solution containing 25 mM histidine and 0.1 mM EDTA. In this case Mg2+ ions
were omitted from the solution to prevent the phosphorylation reaction
from occurring. The pH of the solution was adjusted to 7.4 with HCl. It
should be noted that at this pH value histidine no longer functions
well as a buffer. Nevertheless, its use in combination with EDTA allows
the pH to be adjusted to 7.4 and prevents the introduction of buffer
cations to the medium, which are known to bind to the enzyme in a
fashion similar to that of Na+ ions (Schuurmans Stekhoven
et al., 1986 All stopped-flow experiments with the
Na+,K+-ATPase in which the enzyme underwent
phosphorylation, except those at varying Na+
concentrations, were performed in a buffer containing 30 mM imidazole, 130 mM NaCl, 5 mM MgCl2, and 1 mM EDTA. In the case of
experiments in which the Na+ concentration was varied,
choline chloride was added to the buffer medium to maintain a total
concentration of NaCl plus choline chloride of 130 mM. The total ionic
strength was therefore kept constant at a value of 160 mM (excluding
contributions from imidazole and EDTA).
Each data set, in which either the concentration of Na+ or
that of ATP was varied, were collected using a single
Na+,K+-ATPase preparation. The pH was adjusted
to 7.4 by the addition of HCl. All solutions were prepared using
deionized water. The nominally K+-free buffers were
analyzed by total-reflection x-ray fluorescence spectroscopy and atomic
absorption spectroscopy and found to contain not more than 25 µM
K+ ions.
The origins of the various reagents used were as follows: imidazole
(99+%, Sigma or Comparison of RH421 and 5-IAF fluorescence transients
It has been found previously that RH421 concentrations above 1 µM inhibit the steady-state hydrolytic activity (Frank et al., 1996 The RH421 and 5-IAF fluorescence stopped-flow transients are shown in
Fig. 1. In the case of RH421, reaction of
the enzyme with ATP results in an increase in fluorescence of 97 (± 9)% over the value immediately after mixing, whereas in the case of
5-IAF a fluorescence decrease of 3.1 (± 0.2)% occurs. In both cases, however, it was found that two exponential time functions were necessary to adequately fit the data. The faster phase was responsible for the majority of the fluorescence intensity change (88% of the total amplitude for RH421 and 81% for 5-IAF). From the
fits of the experimental curves the reciprocal relaxation times of the
faster phase were determined to be 164 (± 9) s
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ABSTRACT
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1
155 s
1 for 5-IAF-labeled enzyme and 1/
1
200 s
1 for native enzyme (saturating [ATP] and
[Na+], pH 7.4 and 24°C), is attributed to
phosphorylation of the enzyme and a subsequent conformational change
(E1ATP(Na+)3
E2P(Na+)3 + ADP). The smaller
amplitude slow phase, 1/
2 = 30-45 s
1, is
attributed to the relaxation of the dephosphorylation/rephosphorylation equilibrium in the absence of K+ ions (E2P
E2). The Na+ concentration dependence of
1/
1 showed half-saturation at a Na+
concentration of 6-8 mM, with positive cooperativity involved in the
occupation of the Na+ binding sites. The apparent
dissociation constant of the high-affinity ATP-binding site determined
from the ATP concentration dependence of 1/
1 was 8.0 (± 0.7) µM. It was found that P3-1-(2-nitrophenyl)ethyl ATP,
tripropylammonium salt (NPE-caged ATP), at concentrations in the
hundreds of micromolar range, significantly decreases the value of
1/
1 observed. This, as well as the biexponential nature
of the kinetic traces, can account for previously reported discrepancies in the rates of the reactions investigated.
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INTRODUCTION
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Abstract
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References
; Post et al., 1972
), which
considers two conformations of the enzyme, E1 and
E2, which can be in either a phosphorylated or an
unphosphorylated state. The model, furthermore, describes a consecutive
mechanism of Na+ ion and K+ ion transport
across the membrane. Although the assumption of only two enzyme
conformations would seem, considering the size and complexity of the
enzyme, to be an oversimplification, the Albers-Post model has so far
been quite successful in explaining a great deal of kinetic data.
, some of the
discrepancies between rate constants reported by different groups may
be associated with different sources of the enzyme and inherent species
differences. Using enzyme prepared from a single source (dog kidney),
however, Pratap and Robinson (1993)
observed different kinetic
behavior for the conformational change of the enzyme induced by
ATP, depending on the probe molecule they used. For their stopped-flow
experiments they employed three fluorescent probes:
5-iodoacetamidofluorescein (IAF),
N-[p-benzimidazoyl)phenylmaleimide
(BIPM), and
N-(4-sulfobutyl)-4-(4-(p-(dipentylamino)phenyl)butadienyl)pyridinium inner salt (RH421). They found that the rate constants measured using
IAF and RH421 were approximately half that measured using BIPM under
the same experimental conditions. They therefore proposed that the
enzyme undergoes a sequence of conformational changes and that the
probes detect different steps along the reaction pathway.
; Kane et al., 1997
)
that the probe RH421 (above a concentration of ~1 µM) has an
inhibitory effect on the enzyme. If experiments are carried out at a
sufficiently low RH421 concentration, it was shown by Kane et al.
(1997)
, using enzyme derived from pig kidney, that the probes RH421 and
BIPM yield indistinguishable rate constants. The hypothesis of Pratap
and Robinson (1993)
of different conformational changes, therefore,
appears questionable. There still remains, however, the slower kinetics
they observed with IAF (Pratap et al., 1991
; Pratap and Robinson,
1993
). Here mention must be made of the fitting procedure used. Kane et
al. (1997)
found that two exponential time functions were necessary to
fit their fluorescence transients, obtained using RH421 and BIPM. It
was also reported by Heyse et al. (1994)
that their fluorescence
signals, obtained using both RH421 and IAF, could be fitted much better
by two exponentials than by one. Pratap et al. (1991)
, on the other
hand, fitted their IAF data to a single exponential. If a
double-exponential relaxation is fitted to a single exponential, this
would result in an underestimation of the reciprocal relaxation time of
the faster phase.
; Forbush and Klodos, 1991
; Pratap et al., 1991
; Pratap and
Robinson, 1993
; Kane et al., 1997
), others have added ATP by releasing
it photochemically from a caged complex (Kaplan et al, 1978
; Forbush,
1984
; Fendler et al., 1985
, 1987
, 1993
; Borlinghaus et al., 1987
; Nagel
et al., 1987
; Klodos and Forbush, 1988
; Borlinghaus and Apell, 1988
;
Stürmer et al., 1989
, 1991
; Bühler et al., 1991
; Friedrich
et al., 1996
; Friedrich and Nagel, 1997
). A complication of the latter
method is, however, the binding of the caged complex (NPE-caged ATP) to
the ATP binding site, in competition with ATP itself (Forbush, 1984
;
Nagel et al., 1987
; Fendler et al., 1993
). Unphotolyzed NPE-caged ATP
can, therefore, act as a competitive inhibitor toward ATP binding. This
could easily lead to an underestimation of the rate constants of
Na+-dependent partial reactions of the enzyme, if it is not
taken into account in the analysis of the kinetic transients obtained. To estimate the magnitude of this effect, stopped-flow kinetic measurements on Na+,K+-ATPase, using the
fluorescent probe RH421, are therefore reported here for experiments in
which NPE-caged ATP has been included in the reaction medium.
) with data measured using enzyme obtained from rabbit kidney and,
thus, to examine the possibility of species differences; 2) to compare
the kinetics obtained using the probe IAF with those obtained using
noninhibitory concentrations of RH421 under the same experimental
conditions and using the same fitting procedure; 3) to examine further
the origin of the double-exponential kinetic behavior previously
observed with RH421 (Kane et al., 1997
); and 4) to determine the effect
of NPE-caged ATP on the experimentally observed kinetic behavior.
E1P
E2P). Based on
stopped-flow studies of the dephosphorylation reaction of the enzyme,
it was shown subsequently (Kane et al., 1998
) that the slower
exponential phase is not a reaction on the main catalytic pathway of
the enzyme (i.e., in the presence of saturating concentrations of
Na+, K+, and ATP), but its exact origin is
still unclear.
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MATERIALS AND METHODS
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Abstract
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Materials & Methods
Results
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References
).
,b
). The specific ATPase
activity was measured by the pyruvate kinase/lactate dehydrogenase
assay (Schwartz et al., 1971
), and the protein concentration was
determined by the Lowry method (Lowry et al., 1951
), using bovine serum
albumin as a standard. For the calculation of the molar protein
concentration, a molecular weight of an 
unit of the
Na+,K+-ATPase of 147,000 g mol
1
(Jørgensen and Andersen, 1988
) was assumed. The specific activity of
the unlabeled Na+,K+-ATPase preparations used
was in the range of 1900-2040 µmol Pi/h per mg protein
at 37°C. The protein concentration of the unlabeled preparations was
in the range of 2.3-3.1 mg/ml. The protein concentration and the
specific activity of the 5-IAF-labeled enzyme preparation were somewhat
lower, i.e., 1.1 mg/ml and 1240 µmol Pi/h per mg protein,
respectively.
). The pH of the solution was
adjusted to 7.4 with HCl. The labeled enzyme was separated from unbound dye by passing the reaction mixture through a 3-cm-long Sephadex G-25
column. The K+ ions necessary for labeling of the enzyme
were subsequently removed by dialysis in the buffer solution used for
the stopped-flow measurements.
665 nm by using an RG665 glass cutoff filter (Schott, Mainz, Germany)
in front of the photomultiplier. For experiments using 5-IAF-labeled
enzyme, the mercury line at 435 nm was used for excitation, and the
fluorescence was collected at wavelengths
530 nm by using an
OG530 glass cutoff filter (Schott) in front of the photomultiplier. The
kinetic data were collected via a high-speed 12-bit analog-to-digital
data acquisition board and were analyzed using software developed by
Hi-Tech Scientific. Each kinetic trace consisted of either 512 or 1024 data points. To improve the signal-to-noise ratio, in the case of
measurements using RH421, typically between 8 and 10 experimental
traces were averaged before the reciprocal relaxation time was
evaluated. Because of the much lower fluorescence intensity changes in
the case of measurements where 5-IAF fluorescence was detected, a total
of 57 individual traces were averaged. The error bars shown on the
figures correspond to the standard error of a fit of the averaged
experimental trace of a set of measurements to a sum (either one or
two) of exponential functions. The relaxation time is here defined as
the time necessary for the difference in fluorescence intensity from
its final steady-state value to decay to 1/e of its value at
any point in time. This is based on the standard definition for all
relaxation kinetic methods. It should be noted that the stopped-flow
method employed here is not strictly a relaxation method, but, because
all experiments were carried out under pseudo-first-order conditions,
exponential decay behavior is to be expected, and for simplicity the
term "relaxation time" is therefore used throughout. Nonlinear
least-squares fits of the reciprocal relaxation times to appropriate
kinetic models were performed using the commercially available program
ENZFITTER. To take into account the greater absolute errors of the
higher values of the reciprocal relaxation times, the individual points
were weighted according to the reciprocal of their value. The errors
quoted for the parameters determined (rate and equilibrium constants)
correspond to the standard errors derived from the fits. Computer
simulations of experimental stopped-flow transients were carried out
using the commercially available program Mathematica 2.2.
; Grell et al., 1991
, 1992
, 1994
; Doludda et al., 1994
).
99.5%, Fluka), EDTA (99%, Sigma), NaCl (Suprapur,
Merck), K2SO4 (analytical grade, Merck),
MgCl2·6H2O (analytical grade, Merck), HCl
(0.1 N Titrisol solution, Merck), ATP magnesium
salt·5.5H2O (~97%, Sigma), ATP disodium
salt·3H2O (special quality, Boehringer Mannheim), ethanol
(analytical grade, Merck), L-histidine (
99.5%, Fluka),
and choline chloride (99+%, 3× crystallized, Sigma or microselect,
Fluka). Sephadex G-25 was obtained from Serva (Heidelberg).
![]()
RESULTS
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Abstract
Introduction
Materials & Methods
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References
)
and the transient kinetics of Na+-dependent partial
reactions of the Na+,K+-ATPase (Kane et al.,
1997
). For the stopped-flow measurements reported here, therefore, a
noninhibitory RH421 concentration of 150 nM (before mixing) was used.
The kinetics of the ATP-induced fluorescence transients of both 5-IAF
and RH421 were measured using the same 5-IAF-labeled enzyme
preparation. Measurements, in which the 5-IAF fluorescence signal was
detected, were first performed in the absence of RH421. Subsequently,
RH421 was added, and the experiments were repeated, but with the
detection of the RH421 fluorescence signal. The detection of the RH421
fluorescence in the presence of 5-IAF is possible, because the
wavelength range of fluorescence emission of RH421 is significantly
red-shifted in comparison to that of 5-IAF. This method, therefore,
allows a direct comparison of the 5-IAF and RH421 signals for the same preparation, under conditions that are as close to identical as possible.
1 for
RH421 and 149 (± 7) s
1 for 5-IAF. It appears, therefore,
that at least for the faster phase, the two probes give very similar
reciprocal relaxation times.

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FIGURE 1
Stopped-flow fluorescence transients of 5-IAF-labeled
Na+,K+-ATPase membrane fragments from rabbit
kidney. Na+,K+-ATPase was rapidly mixed
with an equal volume of MgATP (0.5 mM, after mixing). Each solution was
in a buffer containing 130 mM NaCl, 30 mM imidazole, 5 mM
MgCl2, and 1 mM EDTA; pH 7.4, T = 24°C. The solid lines represent fits to a biexponential time
function. (A) RH421 (75 nM, after mixing) was added to
the Na+,K+-ATPase (11 µg/ml or 0.075 µM,
after mixing) suspension. The fluorescence of membrane-bound RH421 was
measured using an excitation wavelength of 577 nm at emission
wavelengths
665 nm (RG665 glass cutoff filter). The calculated
reciprocal relaxation times were 164 (± 9) s
1 (88% of
the total amplitude) and 32 (± 6) s
1 (12%).
(B) The fluoresence of 5-IAF covalently bound to the
protein (50 µg/ml or 0.34 µM, after mixing) was measured using an
excitation wavelength of 435 nm at emission wavelengths
530 nm
(OG530 glass cutoff filter). The calculated reciprocal relaxation times
were 149 (± 7) s
1 (81% of the total amplitude) and 14 (± 2) s
1 (19%).
In the case of the slow phase, the values of the reciprocal relaxation
time were 32 (± 6) s
1 for RH421 and 14 (± 2)
s
1 for 5-IAF. The rate of the slow phase detected by
5-IAF, therefore, appears to be somewhat slower than that detected by
RH421. It should be noted, however, that accurate determination of the
reciprocal relaxation time is much more difficult for the slow phase
than for the fast phase, because of its much smaller amplitude.
Because the amplitude of the overall fluorescence change observed on mixing with ATP is ~30 times greater when the RH421 fluorescence signal rather than that of 5-IAF is used, all subsequent stopped-flow measurements were performed using native Na+,K+-ATPase membrane fragments (i.e., in the absence of the covalent 5-IAF label), to which RH421 was added shortly before the measurements.
Inhibition by NPE-caged ATP
The effect of NPE-caged ATP on the kinetics of the ATP-induced
fluorescence transients of Na+,K+-ATPase
labeled with RH421 was investigated by equilibrating the enzyme with
NPE-caged ATP before mixing with ATP. Kinetic traces obtained in the
absence and presence of 125 µM NPE-caged ATP (after mixing) and at an
ATP concentration of 25 µM (after mixing) are shown in Fig.
2. These concentrations were chosen to be
comparable with the experimental conditions of previously published
data (Stürmer et al., 1989
, 1991
; Bühler et al., 1991
;
Heyse et al., 1994
). In the absence of NPE-caged ATP it was again found
that two exponential time functions were necessary to fit the
experimental curves. The reciprocal relaxation times determined were
137 (± 3) s
1 for the dominant fast phase and 17 (± 4) s
1 for the slow phase. In the presence of 125 µM
NPE-caged ATP it was found that the observed kinetic transient was
significantly slower. In this case the curve could be fitted adequately
by a single exponential time function, and the reciprocal relaxation time was determined to be 37 (± 1) s
1. Experiments
performed at a higher NPE-caged ATP concentration (250 µM after
mixing), but at the same ATP concentration, showed a further
retardation of the transient. In this case the reciprocal relaxation
time was 26 (± 1) s
1.
|
It is therefore evident that the presence of unphotolyzed NPE-caged ATP can cause a significant inhibition of the Na+-dependent partial reactions of the Na+,K+-ATPase induced by the addition of ATP.
Effect of ATP concentration
The reciprocal relaxation time for the fast phase of the
ATP-induced RH421 fluorescence change, 1/
1, was found to
depend on the concentration of Na2ATP (see Fig.
3). At a NaCl concentration of 130 mM, it
was found that 1/
1 increased with increasing
Na2ATP concentration until it leveled out at a maximum
value in the range of 180-220 s
1. The fact that the
reciprocal relaxation time reaches a maximum value suggests that the
process being observed is not simply the binding of ATP to the enzyme,
because this would be expected to show a linear dependence of the
reciprocal relaxation time on the ATP concentration. The simplest
explanation is, therefore, that the observed process is a reaction of
the enzyme occurring subsequent to ATP binding, whereby at low ATP
concentrations the reciprocal relaxation time is slowed by the
equilibration of the ATP binding step. Possible candidates for the
reaction are the phosphorylation of the enzyme or a conformational
change (and, possibly, ADP and Na+ ion release steps)
induced by phosphorylation. The reaction scheme shown in Fig.
4 is, therefore, proposed. According to
this scheme, it can be shown (Kane et al., 1997
) that, at saturating
Na+ concentrations, the ATP concentration dependence of the
reciprocal relaxation time for the fast phase is described by the
following equation:
|
(1) |
F/Fo, increased with increasing
ATP concentration, from a value of 1.05 at the lowest ATP concentration
used (1.0 µM), until it reached a maximum value of ~1.9-2.3 in the
ATP concentration range of 15-50 µM. At higher ATP concentrations
there was a decrease in the value of
F/Fo to ~1.2 at 500 µM ATP.
|
|
Fitting the reciprocal relaxation time data according to the model shown in Fig. 4 to Eq. 1 yields the following parameters:
|
|
Effect of Na+ ion concentration
The reciprocal relaxation time for the fast phase of the
ATP-induced RH421 fluorescence change, 1/
1, was also
found to be dependent on the Na+ ion concentration.
1/
1 increased with increasing Na+ from a
value indistinguishable from zero in the absence of Na+ to
a saturating value of ~200 s
1 at 130 mM Na+
(see Fig. 5). This behavior is consistent
with the idea, incorporated in the Albers-Post model, that
phosphorylation of Na+,K+-ATPase only occurs at
a significant rate when all of the Na+ ion binding sites of
the enzyme are occupied (i.e., as described by the reaction scheme
shown in Fig. 4). The slow phase also showed an increase in its
reciprocal relaxation time with increasing Na+ ion
concentration, reaching a saturation value of 30-45 s
1
at Na+ concentrations
10 mM.
|
The total relative fluorescence change (fast and slow phases),
F/Fo, increased with increasing
Na+ ion concentration, from a value of 0.51 at the lowest
Na+ ion concentration used (0.56 mM), until it reached a
maximum value of ~1.3 in the Na+ ion concentration range
of 10-80 mM. At higher Na+ ion concentrations
F/Fo decreased to ~1.0 at a
concentration of 130 mM.
The total ionic strength in these experiments was maintained at 160 mM
by the addition of choline chloride. This avoided any jump in the ionic
strength on mixing. The reason for limiting the ionic strength to 160 mM was that both stopped-flow (Kane et al., 1997
) and electrical
bilayer measurements (Nagel et al., 1987
) on
Na+,K+-ATPase from pig kidney showed an
inhibition of the enzyme activity at higher salt concentrations.
In the first instance it was attempted to fit the data shown in Fig. 5
to the model shown in Fig. 4, assuming that all of the Na+
binding sites are identical and there is no interaction between them.
Models incorporating one, two, or three identical sites were tested,
but in all cases significant systematic positive and negative
deviations of the fitted curve from the experimental points were
apparent. It is possible that increasing the number of
Na+-binding sites to values significantly greater than
three might produce an improved fit to the data. Because other
investigations have indicated, however, that there are only three
Na+-binding sites (Cornelius and Skou, 1988
), the
theoretical model has not been extended to higher stoichiometries. An
identical site model was therefore considered to be an inappropriate
description of the data.
The sigmoidal form of the Na+ ion concentration dependence
of 1/
1 (see Fig. 5) would appear to be indicative of
positive cooperativity in the binding of the Na+ ions to
Na+,K+-ATPase, i.e., the binding of the first
or the second Na+ ion to the enzyme increases the apparent
affinity of subsequently binding Na+ ions for the enzyme.
It was therefore decided to try and fit the experimental data to models
in which the first or the first and second Na+ ions bind
weakly and, because of a modification of the enzyme conformation by the
weakly binding Na+ ions, the subsequently binding
Na+ ions bind more strongly. In the case of a model in
which there is one weakly binding site and two strongly binding sites,
the appropriate equation is
|
(2) |
|
|
(3) |
|
It was found that both models incorporating positive cooperativity gave much improved descriptions of the experimentally observed behavior over identical site models. Judging by the sum of the squares of the residuals, the best fit was obtained using a model (Eq. 3) involving two weakly binding sites and one strongly binding site. The fit to this model is shown in Fig. 5.
The values of the parameters calculated from the fits to the positive
cooperativity models are as follows. For the model incorporating one
weakly binding site (apparent association constant
K1) and two strongly binding sites (apparent
microscopic association constant K2), the best
fit values were K1 = 1.8 (± 1.3) × 101 M
1, K2 = 5.5 (± 1.9) × 102 M
1, and k3 = 208 (± 7) s
1. The values of K1
and K2 correspond to apparent microscopic
dissociation constants of 56 (± 42) mM and 1.8 (± 0.6) mM,
respectively. For the model incorporating two weakly binding sites
(apparent microscopic association constant K1)
and one strongly binding site (association constant
K2), the best fit values were
K1 = 1.3 (± 0.5) × 102
M
1, K2 = 5.4 (± 2.7) × 102 M
1, and k3 = 204 (± 5) s
1. In this case the values of
K1 and K2 correspond to
apparent microscopic dissociation constants of 8 (± 3) mM and 1.8 (± 0.9) mM, respectively. The latter model is in reasonable agreement with
equilibrium binding studies carried out with the same enzyme (Schulz
and Apell, 1995
). At the high ATP concentration used in the
experiments, the exact value of the ATP apparent binding constant, KA, used for the fits is unimportant, because
under these conditions the ratio
KA[ATP]/(1 + KA[ATP]) in Eqs. 2 and 3 reduces to unity.
Slow phase kinetics
The biexponential nature of the RH421 stopped-flow kinetic traces
obtained on mixing enzyme in the presence of Na+ with ATP
was first identified by Kane et al. (1997)
. There the dominant faster
phase was attributed to phosphorylation of the enzyme and a subsequent
conformational change (E1ATP(Na+)3
E2P(Na+)3 + ADP). The origin of
the smaller amplitude slower phase was not considered in detail. It has
then been shown (Kane et al., 1998
) that the slower phase cannot be due
to a reaction lying on the main catalytic pathway of the enzyme,
because it does not cause any rate limitation of the
K+-stimulated dephosphorylation reaction. Kane et al.
(1998)
suggested that the slower phase could possibly be associated
with an enzymatic pathway that only occurs in the absence of
K+ ions, in particular a relaxation of the
dephosphorylation/rephosphorylation equilibrium of the enzyme in the
absence of bound ions. Here we would like to consider this possibility
in more detail by carrying out computer simulations of appropriate
reaction models and by presenting the results of further experimental
investigations.
Let us first consider the following reaction model:
|
(4) |
1. The rate of the backward reaction, i.e.,
dephosphorylation of the E2P state via ADP, is assumed to
be negligible, because the concentration of ADP present in solution is
only the small amount produced by ATP hydrolysis over the time scale of
an experiment. For an enzyme concentration of 0.075 µM and assuming
the enzyme is hydrolyzing ATP at a rate of ~5 s
1 (Hobbs
et al., 1980kb represents the rate constant for spontaneous
dephosphorylation of enzyme in the E2P state. Quenched-flow
measurements on enzyme derived from eel electric organ (Hobbs et al.,
1980
) yielded a value for kb of 4 s
1 at 21°C and pH 7.5. Similar measurements carried out
by Campos and Beaugé (1992)
yielded a value of 2 s
1
for pig kidney enzyme at 20°C and pH 7.4. Stopped-flow measurements using enzyme from pig kidney (Kane et al., 1998
) yielded a value of 7 s
1 for kb at 24°C and pH 7.4. From measurements of RH421 fluorescence transients after the
photochemical release of inorganic phosphate from a caged compound,
Apell et al. (1996)
found a value of 3 s
1 for enzyme from
rabbit kidney at 21°C and pH 7.1. For the purposes of the simulations
of the experiments described here at 24°C and pH 7.4, a value for
kb of 5 s
1 has been chosen.
k
b represents the rate constant for
rephosphorylation of the enzyme, i.e., the reformation of enzyme in the
E2P state from the E2 state. It should be noted
that, in principle, there are two possible pathways by which this could
occur: 1) a direct back reaction in which the enzyme is phosphorylated
by inorganic phosphate, and 2) an indirect back reaction involving a
conformational change of the enzyme to the E1 state,
followed by phosphorylation by ATP. Pathway 1) can be considered to be
very unlikely, however, because the concentration of inorganic
phosphate present is negligible. The concentration of inorganic
phosphate produced after 0.1 s can be estimated, as in the case of
ADP above, to be only ~0.04 µM. This is far below the reported
apparent Km of the E2 conformation of rabbit kidney enzyme for inorganic phosphate of 23 µM (Apell et
al., 1996
), as well as the dissociation constants of 32 µM (Campos
and Beaugé, 1994
) and 29 µM (Fedosova et al., unpublished results) reported for pig kidney enzyme. Therefore, it would seem that
only pathway 2), i.e., rephosphorylation by ATP via the E1 state, need be taken into consideration. This pathway consists of two
basic steps: first, the conformational change of enzyme from the
E2 to the E1 state, and second, the
phosphorylation of the enzyme by ATP and its conversion to the
E2P state, which has been found here to have a rate
constant of ~200 s
1.
To obtain kinetic information on the rate of the E2 to
E1 transition, stopped-flow mixing experiments have
previously been performed in which the enzyme was preequilibrated with
a small amount (1-5 mM) of KCl, so as to stabilize the
E2(K+)2 form of the enzyme, and
then mixed with an excess of NaCl (50-130 mM). This induces the
transition E2(K+)2
E1(Na+)3. The results obtained
(Steinberg and Karlish, 1989
; Pratap et al., 1996
; Kane et al., 1997
)
showed that this reaction occurs with a rate constant of
30
s
1. In the case of the experiments reported here,
however, no K+ ions were present. Therefore, to judge the
feasibility of pathway 2), in which rephosphorylation is assumed to
occur by ATP via the E1 state, it is necessary to determine
the kinetics of the reaction E2
E1(Na+)3. This has been performed
by rapidly mixing enzyme, labeled with RH421, in the absence of
Na+ ions with 130 mM NaCl solution. To investigate the
effect of ATP on this reaction, various concentrations of
Na2ATP were added to the NaCl solution.
It was found that on mixing with NaCl a decrease in fluorescence
occurred. At low concentrations of Na2ATP (
25 µM, after mixing), two kinetic phases could be resolved, a slow fluorescence decrease and a more rapid fluorescence decrease with a reciprocal relaxation time in the range 10-32 s
1. The amplitude of
the rapid kinetic phase, however, decreased significantly with
increasing Na2ATP concentration, until at concentrations of
50 µM after mixing, only a single kinetic phase could be resolved. The origin of the rapid phase observed at low Na2ATP
concentrations is not clear at this stage. Because the
double-exponential behavior of the RH421 and IAF fluorescence
transients of phosphorylation experiments (see Fig. 1) is observed even
at high ATP concentrations, we shall concentrate here on the phase that
is present over the whole Na2ATP concentration range.
Similar to the behavior found for experiments in which the enzyme was
preequilibrated with KCl (Karlish and Yates, 1978
; Steinberg and
Karlish, 1989
; Pratap et al., 1996
; Kane et al., 1997
), the value of
the reciprocal relaxation time for the observed fluorescence transient
increases with increasing Na2ATP concentration, reaching a
saturating value of 39 s
1 (see Fig.
6). The total relative fluorescence
change, 
F/Fo, also increased
with increasing Na2ATP concentration, from a value of
~0.11 in the absence of Na2ATP to a saturating value of
~0.15. From the ATP concentration dependence of the reciprocal
relaxation time, it is possible to estimate the binding constant for
the low-affinity ATP-binding site. If one assumes that the ATP-binding step is in equilibrium on the time scale of the conformational change,
then it can be shown that the reciprocal relaxation time, 1/
, is
related to the concentration of ATP by
|
(5) |
)min is the reciprocal relaxation time for the
formation of enzyme in the E1(Na+)3
conformation from the E2 conformation in the absence of
ATP, and (1/
)max is the reciprocal relaxation time at a
saturating concentration of ATP. This equation is based on a model in
which there are two pathways from E2 to
E1(Na+)3: one in the absence of
bound ATP and one that is ATP stimulated. Fitting the data shown in
Fig. 6 to Eq. 5 yields a value for KA' of 1.41 (± 0.14) · 104 M
1. This corresponds to an
apparent dissociation constant of 71 (± 7) µM. The values of
(1/
)min and (1/
)max determined from the
fit were 0.8 (± 0.2) s
1 and 39 (± 1) s
1,
respectively.
|
These data indicate that in the absence of K+ ions and at
saturating ATP concentrations, the reaction E2
E1(Na+)3 occurs with a rate
constant of
39 s
1. Because this is much slower
than the phosphorylation of the enzyme by ATP and its conversion to the
E2P state, which have been shown above to occur with a rate
constant of ~200 s
1, the reaction E2
E1(Na+)3 can be considered
rate-determining for the rephosphorylation reaction via pathway 2),
i.e., by ATP via the E1 state. k
b in model (4) can, therefore, be approximated to be 30 s
1.
Using the values given above, i.e., ka = 200 s
1, kb = 5 s
1 and
k
b = 30 s
1, it can be shown via
computer simulation that reaction scheme (4) is able to reproduce the
experimentally observed biexponential behavior of the RH421 kinetic
traces, as long as it is assumed that the fluorescence of dye
associated with enzyme in its various states increases in the order
E1ATP(Na+)3 < E2P < E2. The assumption of a higher fluorescence level of dye
associated with the E2P state in comparison to the
E1ATP(Na+)3 state is in agreement
with previous experimental observations (Bühler et al., 1991
;
Stürmer et al., 1991
; Pratap and Robinson, 1993
; Klodos, 1994
;
Kane et al., 1997
). However, there is as yet no experimental
justification for the assumption of a higher fluoresecence level of the
E2 state compared to the E2P state. In the
presence of K+ ions it has been found that
dephosphorylation of the enzyme leads to a significant decrease in
fluorescence (Stürmer et al., 1991
; Bühler and Apell, 1995
;
Kane et al., 1998
). This has been interpreted as being due to the
formation of enzyme in the E2(K+)2
state. In the absence of K+ and Na+ ions it has
also been found that the fluorescence of RH421 associated with
unphosphorylated enzyme is lower than that of dye associated with
phosphoenzyme formed by the addition of inorganic phosphate (Fedosova
et al., 1995
; Apell et al., 1996
). Whether these findings concerning
the direction of the fluorescence change on phosphorylation are
relevant to the experiments reported here, where phosphorylation was
initiated by the addition of ATP in the presence of Na+
ions, is questionable, however, because it has been shown recently by
Fedosova et al. (1997)
that the E2P enzyme forms produced
on phosphorylation by ATP and inorganic phosphate are not identical, and the presence or absence of Na+ and K+ ions
is known to cause changes in enzyme conformation, at least in the case
of unphosphorylated enzyme (Karlish, 1980
; Grell et al., 1992
; Smirnova
and Faller, 1993
; Doludda et al., 1994
; Smirnova et al., 1995
; Bugnon
et al., 1997
; Kane et al., 1997
). In the absence of K+ ions
and the presence of Na+ ions, therefore, the direction of
any fluorescence change induced by the dephosphorylation of
phosphoenzyme produced by ATP phosphorylation is difficult to predict.
Although the origin of the fluorescence changes of RH421 associated
with Na+,K+-ATPase are unclear at this stage,
Stürmer et al. (1991)
and Klodos (1994)
have suggested that they
may arise from ion binding to and release from the enzyme rather than
from phosphorylation alone. If this is true, then it might be expected
that dyes associated with the E2P and E2 states
of the enzyme may have very similar fluorescence levels (Apell et al.,
1996
). In this case reaction scheme (4) would no longer be an adequate
description of the experimentally observed behavior.
To accommodate the idea that the fluorescence changes in RH421 arise from changes in the occupancy of the ion-binding sites we therefore propose the following alternative reaction scheme:
|
(6) |
1 represent here the rates of dissociation
and binding, respectively, of the Na+ ions from or to the
E2P form of the enzyme. It should be noted that the binding
of each Na+ ion to the E2P form of the enzyme
is a second-order reaction, so that the absolute value of
v
1 is dependent on the Na+
concentration. Both steps are assumed to be very fast, so that on the
time scale of the phosphorylation reaction, the species E2P(Na+)3 and E2P are
always in equilibrium with each other. Stopped-flow measurements on
Na+,K+-ATPase from pig kidney (Kane et al.,
1998
1, and electrical measurements of Wagg et al. (1997)
1000 s
1, which
they also attributed to the release of Na+ ions from the
phosphorylated enzyme. We have therefore chosen a value of
v1 of 1000 s
1. It is generally
accepted (Glynn, 1985
1 for v1, it can be shown
that, at a NaCl concentration of 130 mM, v
1
can be estimated to have a value in the range of 1,000-10,000
s
1.
If one chooses the following values, ka = 200 s
1, kb = 5 s
1,
k
b = 30 s
1,
v1 = 1000 s
1, and
v
1 = 1000 s
1, which have been
shown to be experimentally justified above, and one assumes the
fluorescence levels given above (i.e., zero for enzyme species with
Na+ bound and 100% for species free of Na+
ions), computer simulations based on reaction scheme (6) are able to
reproduce the biexponential behavior of the RH421 kinetic traces (see
Fig. 7). The biexponential character of
the simulated curve (solid line) can easily be seen from the
deviations of the simulation from one in which the final
dephosphorylation/rephosphorylation step has been omitted from the
model (dotted line). In the latter case a pure single
exponential relaxation is obtained. It should be noted that the exact
choice of the values of v1 and
v
1 is not critical. The two values must merely
be much greater than 200 s
1 and be of a similar order of
magnitude, so that the Na+ ion binding and release are
always in equilibrium on the time scale of the phosphorylation
reaction, and that there are sufficient amounts of enzyme in the
E2P(Na+)3 and E2P
states before relaxation of the dephosphorylation/rephosphorylation equilibrium.
|
Although reaction scheme (6) is able to explain the observed kinetic
behavior, it should be kept in mind that it is a somewhat simplified
scheme, because E2P species with one and two bound Na+ ions are also likely to be present, and the
Na+ ions would presumably be released sequentially from the
enzyme. In fact, there is some experimental evidence to suggest that
model (6) may not provide a complete description of the experimental behavior. If one determines from the experiments shown in Fig. 4 the
percentage of the total amplitude accounted for by the slow phase as a
function of the Na+ concentration, then it is found that
there is a drop in the relative amplitude of the slow phase with
increasing Na+ concentration. At a Na+
concentration of
10 mM, the slow phase accounts for ~20% of the
overall signal, whereas at a concentration of 130 mM the value is only
~8%. This behavior would not be expected according to reaction
scheme (6), which would predict an increase in the percentage of the
slow phase with increasing Na+ concentration until it
reached a saturating value. Such a behavior would, however, be expected
on the basis of reaction scheme (4), because high concentrations of
Na+ ions would be expected to stabilize the enzyme in the
E2P(Na+)3 state and hence lead to a
decrease in the proportion of enzyme undergoing dephosphorylation.
Alternatively, the assumption of reaction scheme (6) that the total
fluorescence change arises from the release of all three
Na+ ions from the enzyme may not be justified. It is
possible that the release of one or two Na+ ions from the
enzyme may be sufficient to induce the fluorescence change detected
using RH421. Nevertheless, regardless of which of the two reaction
schemes is closer to the truth, the simulations and the experiments
described here indicate that, under the experimental conditions used,
relaxation of the dephosphorylation/rephosphorylation equilibrium via
ATP and the E1 state as described by models (4) and (6) can
be expected to occur and can be considered as the most likely cause for
the biexponential kinetic behavior observed using RH421.
| |
DISCUSSION |
|---|
|
|
|---|
The kinetics of Na+-dependent partial reactions of the
Na+,K+-ATPase from rabbit kidney have been
investigated via the stopped-flow technique by mixing fluorescently
labeled enzyme in the presence of Na+ and Mg2+
ions with ATP. Two fluorescent labels were used: IAF, which is covalently attached to the enzyme, and RH421, which is noncovalently associated with the enzyme-containing membrane fragments. The two
labels delivered very similar kinetic responses (see Fig. 1). In both
cases two exponential time functions were necessary to fit the data.
The fast phase is the major component, contributing between 80% and
90% of the overall fluorescence change. When experiments were carried
out with the same IAF-labeled enzyme preparation under identical
experimental conditions (saturating [Na+] and [ATP], pH
7.4 and 24°C), no significant difference was found in the reciprocal
relaxation times of the two probes: 164 (± 9) s
1 (for
RH421) and 149 (± 7) s
1 (for IAF). When experiments were
carried out using RH421 on rabbit kidney enzyme not labeled with IAF,
it was found that the value was in the range of 200-210
s
1. The differences in the reciprocal relaxation times
obtained for IAF-labeled enzyme and enzyme not labeled with IAF can be explained by the differences in the specific activities of the two
preparations.
Based on the dependence of the observed reciprocal relaxation times on
ATP concentration and Na+ concentration and taking into
account previously published values of the rate constants of the
various partial reactions of Na+,K+-ATPase, the
two kinetic phases can be interpreted as follows. Before the addition
of ATP, the enzyme can be considered to exist in an equilibrium between
two conformations (E1 and E2). In the presence
of Na+ ions (zero added K+), one of the
conformations (E1) is favored over the other. After the
addition of ATP, enzyme in the E1 conformation is rapidly phosphorylated, undergoes a rapid conformational change, and releases, depending on the Na+ concentration in solution, some or all
of its Na+ ions
(E1(Na+)3 + ATP
E2P(Na+)3
E2P + 3Na+). This accounts for the dominant fast phase of the
fluorescence transients. Subsequently, the enzyme can undergo a
dephosphorylation, which in the absence of K+ ions is very
slow (~5 s
1), a conformational change back to the
E1 form (at a rate of ~30 s
1), and
rephosphorylation via ATP (E2P
E2
E1 + 3Na+
E1(Na+)3 + ATP
E2P(Na+)3
E2P + 3Na+). The slow phase is attributed to the relaxation of
the dephosphorylation/rephosphorylation equilibrium. The
experimental results can, therefore, all be explained in terms of the
Albers-Post model of two major enzyme conformations.
The very similar reciprocal relaxation times observed with RH421 and
IAF on IAF-labeled enzyme suggests that the two probes are following
the kinetics of the same enzyme conformational change. Previously it
had been suggested by Pratap and Robinson (1993)
that the three probes,
BIPM, RH421, and IAF, each report on a different step in a sequence of
enzyme conformational changes. Their conclusion was based on
stopped-flow kinetic data using the three probes with
Na+,K+-ATPase from dog kidney. Under saturating
conditions of Na+ and ATP they found that the reciprocal
relaxation times measured using BIPM were approximately double those
found for RH421 and IAF. In a more recent publication (Kane et al.,
1997
) it was shown that RH421 and BIPM gave almost identical kinetic
responses. There it was suggested that the slower kinetics Pratap and
Robinson (1993)
observed with RH421 could perhaps be attributed to the relatively high concentration of probe they used of 2 µM, because it
was found (Kane et al., 1997
) that concentrations of RH421 in the
micromolar range can inhibit Na+-related partial reactions
of the enzyme. Here we wish to consider the possible reason for the
slower kinetics Pratap and co-workers (Pratap et al., 1991
; Pratap and
Robinson, 1993
) observed using IAF compared to BIPM. In light of the
results presented here, it would seem that an important contributing
factor is the biexponential nature of the kinetic curves. Pratap and
co-workers fitted their kinetic curves at saturating Na+
and ATP concentrations, using all three probes, to a single exponential function. The relaxations presented here and elsewhere (Kane et al.,
1997
), however, clearly require two exponential time functions to
obtain an adequate fit. Evidence for biexponential kinetic behavior can
also be seen in the time course of the IAF fluorescence decay observed
by Pratap et al. (1991)
at 155 mM NaCl, which appears to show
significant deviation from a single exponential, particularly at long
times. If a biexponential relaxation is fitted to a single exponential,
this results in an underestimation of the reciprocal relaxation time.
Based on the results presented here and in a previous publication (Kane
et al., 1997
) using the probes RH421, BIPM and IAF there appears to be
no justification for the assumption made by Pratap and Robinson (1993)
of a series of enzyme conformational changes. If one takes into account
the inhibitory action of RH421 (at micromolar concentrations) and the
biexponential behavior of the traces, then the three probes give very
similar kinetic responses. A single enzyme conformational change,
therefore, appears to be determining the rate of the major kinetic
phase of all three probes.
Now let us consider the question of species differences. Experiments
very similar to those presented here on enzyme derived from rabbit
kidney have previously been reported (Kane et al., 1997
) for enzyme
derived from pig kidney. This allows a direct comparison of the
parameters derived and an analysis of whether any significant kinetic
or mechanistic differences exist between the two sources.
As stated above, in the case of rabbit kidney
Na+,K+-ATPase, the reciprocal relaxation time
for the dominant fast phase of the RH421 fluorescent signal at
saturating ATP and Na+ concentrations was found to be in
the range of 200-210 s
1. Analogous experiments carried
out using pig kidney (Kane et al., 1997
) yielded a value of ~180
s
1. The apparent high-affinity dissociation constant for
ATP was found here for rabbit kidney enzyme to be 8.0 (± 0.7) µM.
The corresponding value for pig kidney enzyme was 7.0 (± 0.6) µM. From the Na+ concentration dependence of the reciprocal
relaxation time, it was found here for rabbit kidney enzyme that
half-saturation occurs at a Na+ concentration of 6-8 mM
with positive cooperativity involved in the occupation of the
Na+ binding sites. The results obtained for pig kidney
enzyme also indicated positiv