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Biophys J, January 1999, p. 414-422, Vol. 76, No. 1
*Institut für Materialphysik, Universität Wien, 1090 Wien, Austria, and #Fakultät für Physik E13/17, Technische Universität München, 85747 Garching, Germany
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ABSTRACT |
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The Mössbauer effect of 57Fe-enriched samples was used to investigate the coupling of 80% sucrose/water, a protein-stabilizing solvent, to vibrational and diffusive modes of the heme iron of CO-myoglobin. For comparison we also determined the Mössbauer spectra of K457Fe (CN)6 (potassium ferrocyanide, PFC), where the iron is fully exposed in the same solvent. The temperature dependence of the Mössbauer parameters derived for the two samples proved to be remarkably similar, indicative of a strong coupling of the main heme displacements to the viscoelastic relaxation of the solvent. We show that CO escape out of the heme pocket couples to the same type of fluctuations, whereas intramolecular bond formation involves solvent-decoupled heme deformation modes that are less prominent in the Mössbauer spectrum. With respect to other solvents, however, sucrose shows a reduced viscosity effect on heme displacements and the kinetics of ligand binding due to preferential hydration of the protein. This result confirms thermodynamic predictions of the stabilizing action of sucrose by a dynamic method.
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INTRODUCTION |
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A unique apolar environment is one of the essential aspects in the catalytic enhancement of biochemical reactions. On the other hand, the binding site has to be accessible from the outside. The ligands enter and leave the protein structure, which requires a pathway possibly gated by structural fluctuations that couple the active site to the protein surface. The heme group of myoglobin and of most other heme proteins is buried in a cleft of the apo-structure.
In the case of myoglobin this serves to prevent the oxidation of the
ferrous iron, which is catalyzed by water. The shielding from the
solvent is, however, not perfect as the heme-propionate side chains
protrude into the solvent. It is important to assess whether these
contacts affect the intramolecular mobility of the heme and, in turn,
the kinetics of ligand binding. Structural interpretations predict that
the salt bridge formed by Arg45 and the heme-6-propionate side chain
controls the access to the heme pocket (Ringe et al., 1984
; Perutz,
1989
).
The Mössbauer effect, using 57Fe-enriched samples,
allows one to probe the dynamics of the heme iron. The so-called
recoilless nuclear resonant absorption of
-rays has so far led to
wide application in the research of protein dynamics, using
radioisotopes as Mössbauer
-ray sources, such as
57Co. The Mössbauer effect in proteins has the two
characteristic features of a rapid decrease of the Debye-Waller factor
above a characteristic temperature (~200 K) and the appearance of
quasielastic line-broadening in the energy range of a few neV (Parak
and Formanek, 1971
; Keller and Debrunner, 1980
; Parak et al., 1981
,
1982
; Nowik et al., 1983
). These results were interpreted in terms of
protein-specific structural jumps and diffusion between conformational
substates (Knapp et al. 1982
; Nadler and Schulten, 1984
). It is thus of interest to establish whether the characteristic temperature of 200 K
is a property of the protein alone or whether it reflects mainly the
heme-solvent coupling. To clarify this point we have performed a
Mössbauer study of myoglobin in a viscous solvent, 80%
sucrose/water, which has a glass temperature well above 200 K.
Sucrose belongs to the small set of compounds that were selected by
organisms, ranging from single cells to amphibians and higher plants,
to resist dehydration, osmotic shock, and freezing at subzero
temperatures (Yancey et al., 1982
; Carpenter and Crowe, 1988a
,b
; Crowe
et al., 1996
). The carbohydrate is also well known as a potent
stabilizer of proteins in their native state. These features have been
attributed to the ability of sucrose and other carbohydrates to replace
or complement the hydration shell of proteins (Carpenter and Crowe,
1989
). The thermodynamic analysis of Timasheff and collaborators
(Timasheff, 1993
; Lin and Timasheff, 1996
) suggests instead that
sucrose enhances the tension at the protein-solvent interface and is
thus excluded preferentially from the protein domain.
The suggested partial demixing of the solvent should be readily
observable in those dynamical parameters that are affected by the
microviscosity at the protein surface. In a previous study we have
characterized the kinetics of ligand binding to myoglobin in various
solvents, including 80% sucrose/water (Kleinert et al., 1998
). Below
we show that the kinetics of ligand binding to myoglobin and
Mössbauer spectroscopy of the heme binding site show parallel
effects in response to changes in the co-solvent composition and
solvent viscosity. The behavior of myoglobin and hemoglobin in viscous
solvents and glasses has been investigated previously using other
spectroscopic techniques (Beece et al., 1980
; Ansari et al., 1992
;
Hagen et al., 1995
, 1996
; Gottfried et al., 1996
).
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MATERIALS AND METHODS |
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Sample preparation
To investigate the dynamics of the 80% sucrose/water solvent by
Mössbauer spectroscopy,
K457Fe(CN)6 (potassium
ferrocyanide, abbreviated PFC) was added to the solvent. PFC and
sucrose were dissolved separately in an excess of water. The
sucrose/water mixture was stirred at 70°C until it was homogeneous
and clear. The PFC solution was added and water was evaporated from the
mixture to obtain a concentration of 3.3% PFC and 96.7% sucrose/water
solution (concentration of sucrose/water, 78.7:21.3, w/w). The sucrose
concentration was kept slightly below 80%, because the risk of
crystallization at ~0°C or below rises dramatically at 80%. The
absorption corrections due to different 57Fe concentrations
were investigated using three different samples: the first one
containing 57Fe-enriched potassium-ferrocyanide,
n57Fe = 21.40 × 1017
cm
2, a second one with natural PFC,
n57Fe = 5.96 × 1017
cm
2, and the third one with exactly the same iron
concentration as used for the myoglobin sample,
n57Fe = 3.24 × 1017
cm
2, where n57Fe is the number of
57Fe atoms per cm2 seen by the
-rays emitted
from the source. The respective data sets were separately analyzed and
averaged afterwards as no systematic differences were found.
To obtain a sample with MbCO in sucrose solution (MbCO/SUC), 20 mg of
57Fe-enriched horse myoglobin in 50 mM phosphate buffer at
pH 7 was reduced by sodium dithionite under N2 atmosphere.
CO-ligated myoglobin was obtained by exchanging the N2 gas
with CO. The MbCO solution was concentrated to ~100 ml. Then, 160 mg
of sucrose was dissolved in 300 ml of H2O at 80°C under
CO atmosphere and concentrated to 200 ml. The MbCO and sucrose
solutions were mixed in the sample holder. This solution was kept over
silica gel at 43°C and dried to a final concentration of 12.5%
CO-ligated horse myoglobin and 87.5% sucrose/water solution (w/w). The
sealed sample was cooled in an ice bath. Then the temperature was
slowly decreased to
18°C. Finally, the sample was stored in liquid nitrogen.
Data acquisition and analysis
Mössbauer spectra were measured with a 57CoRh
source emitting 14.4 keV of
-radiation. Some of the quanta were
absorbed resonantly by the 57Fe atoms in the sample. The
extent of resonant absorption in the sample was measured in
transmission geometry. Energy-resolved measurements were achieved by
moving the emitter relative to the absorber with variable velocity
,
using a Doppler drive. During the measurement, the velocity was varied
in the range of either ±3 or ±12 mm/s. The absorption spectra of the
PFC samples and the MbCO/SUC sample were measured in a cryostat with a
temperature stability of ±0.1 K. Several series were performed all
starting at 100 K and continuing to temperatures up to 265 K. The
temperature was raised by 1 K/min and kept constant at each for several
minutes before starting the measurement.
We measured the transmission D(
) of the sample, which
should, in the simplest case, exhibit a Lorentzian shape, the Fourier transform of an exponential decay process, characterized by a width
v and a central position on the velocity axis
v0 (Greenwood and Gibb, 1971
):
|
(1) |
-radiation relative to the sample.
I(v0) denotes the maximal number of
counts at
0. I(
max) is the
number of counts at maximal velocity. The Doppler velocity can be
converted to a conventional energy (frequency) scale by
E = h
= (v/c) × 14.4 keV. Thus, a velocity of
= 0.1 mm/s corresponds to an
energy of 4.8 neV. The minimal width of the Lorentzian is given by the
natural linewidth,
N = h/(2
N)
0.1 mm/s, where and
N = 141 ns denotes the lifetime of the excited state of
the 57Fe nucleus. As both absorber and emitter contribute
their natural linewidth, the effective instrumental width in
transmission geometry is 2
N = 0.2 mm/s. Chemical
inhomogeneities of the source and/or the sample and dynamical processes
on a time scale comparable to
N lead to a further
broadening of the resonance line
v.
Another important quantity is the velocity integrated transmission, the total area covered by the resonance line, which for a Lorentzian is given by:
|
(2) |
-quanta emitted from the source without recoil (Lamb-Mössbauer
factor of the source), fa is the fraction of
-quanta absorbed by the sample without recoil (Lamb-Mössbauer
factor of the absorber which is the sample), n57Fe is the number of 57Fe atoms
per cm2, and
is the absorption cross section of a
single 57Fe atom. Most conclusions derived from
Mössbauer experiments are based on the Lamb-Mössbauer
factor fa, which, in the Gaussian approximation,
can be written as:
|
(3) |
/
= 7.3 A
1 is the wave vector of the 14.4 keV
-radiation emitted by the Mössbauer source, and
x2
denotes the mean square displacement of
the iron atoms in the sample. fa equals unity if
the absorber nucleus does not move relative to the emitter. The
displacements thus refer exclusively to dynamical disorder; static
disorder is not detected. The
x2
values
were determined from:
|
(4) |
x2
, it
is assumed that the mean square displacements decrease linearly with
temperature below 180 K and extrapolate to the classical value of
x2
= 0 at T = 0. This way
the second term of Eq. 4 is eliminated. Assuming that the heme iron is
coupled to a system of harmonic oscillators with mass m,
frequencies
i and coupling coefficients
i, one obtains the expression (Housley and Hess, 1966
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(5) |
i2 in the
high-temperature limit, emphasizing the low-frequency modes.
The observed spectra are not symmetric with respect to
v = 0. This shift in the center of gravity, the isomer
shift v0 =
S, has two major
contributions, the chemical shift
Schem,
which depends on the particular chemical environment of the heme iron, and the so-called second-order Doppler shift
SSOD, which is proportional to

2
, the mean squared velocity of the heme iron
(Reinisch et al., 1985
):
|
(6) |
= 14.4 keV is the energy of
the
-radiation. In a harmonic coupling model one obtains for the
mean squared velocity (Housley and Hess, 1966
|
(7) |
S is then given by:
|
(8) |
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RESULTS |
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Figs. 1 and
2 show the Mössbauer spectra of the
iron salt PFC and of myoglobin in 80% sucrose/water, respectively. In
the former, despite the low-spin II+ state of the iron, the electric quadrupole splitting of the energy levels is small because of the
octahedral symmetry of the iron environment. The PFC data could thus be
fitted using a single Lorentzian line characterized by the width
v. In contrast, the iron atom in MbCO, which is also in
a low spin state, resides in a highly asymmetric environment resulting
in a significant quadrupole splitting of the absorption line. In this
case the data can be fitted by a superposition of two Lorentzians of
equal widths,
v, and equal minima, i.e., a Lorentzian
doublet. Fig. 3 displays the
temperature dependence of the linewidths.
v of the PFC
sample remains constant at low temperatures, reflecting the
instrumental resolution, but increases above 250 K. The MbCO/SUC
doublet has a slightly lower width at low temperatures (less
inhomogeneous broadening), and the corresponding increase in
v starts at the slightly lower temperature of 240 K. The
line broadening at the onset temperature reflects diffusive motions
that become resolved when the corresponding relaxation times have
reached the level of 10 ×
N, a few microseconds.
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Two kinds of diffusion are expected to occur: bound diffusion of the
heme group within the protein and diffusion of the whole protein
molecule (Keller and Debrunner, 1980
). The latter seems to be less
likely because the protein exhibits a lower onset temperature than the
smaller and thus faster PFC molecule. Expanding the velocity window of
the spectra shows that a single Lorentzian component is not perfectly
adequate to fit the data above 240 K. This effect is most pronounced
for the MbCO/SUC sample (Fig. 2, right). Fitting attempts, introducing
a second Lorentzian doublet, yield a much broader line of ~2 mm/s. It
is also conceivable that the high-velocity wings in the spectra
represent non-Lorentzian corrections to the first doublet rather than a
well distinguished second component (Parak et al., 1989
).
The mean square displacements of the 57Fe nucleus versus
the temperature, derived from Eqs. 3 and 4, are depicted in Fig.
4. The figure compares data obtained
with deoxy-myoglobin crystals (Parak et al., 1982
), MbCO/SUC, and PFC.
The displacements show a common linear increase at low temperatures but
start to diverge above 150 K. For the myoglobin crystals the most
pronounced increase takes place at ~200 K. Similar features were
observed with aqueous (frozen) myoglobin solutions (Keller and
Debrunner, 1980
). Comparing these data with our results on MbCO/SUC, we
notice a clear up-shift in the main transition to ~240 K. A minor
deviation from the harmonic behavior occurs at 210 K. The iron in PFC
exhibits larger displacements than MbCO/SUC at low temperatures, but
the onset temperatures of anharmonic behavior, 230-240 K, are similar.
The up-shift in the transition temperatures may reflect the higher
viscosity of the sucrose solution relative to crystal water. The
two-component analysis of the spectra, mentioned above, reduces the
absolute values of the displacements by ~20% and may up-shift the
transition temperature by ~5°.
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Fig. 5 illustrates how the center of
gravity v0 of spectra in two solvents changes
with the temperature. The figure compares data obtained with myoglobin
in 75% glycerol/water (Franke, 1992
) with data obtained with myoglobin
and PFC in 80% sucrose/water. For optimal superposition and to account
for the difference in chemical shift between PFC and myoglobin, a
constant of 0.285 mm/s was added to the central shift of PFC. These
systems do not exhibit any low-lying electronic states whose population
would change with temperature (Trautwein et al., 1970
). The chemical shift displayed by these systems is thus assumed to be temperature independent. The differences in the temperature behavior, displayed in
Fig. 5, are thus assigned to variations in the vibronic coupling of the
heme to its environment. It follows that the composition of the solvent
affects the vibrational spectrum of the heme in myoglobin. Furthermore,
the solvent-exposed PFC molecule displays nearly the same temperature
dependence in the central shift as myoglobin. In fact, the differences
in
S(T) observed between PFC and myoglobin in
the same solvent are smaller than those found with myoglobin in 75%
glycerol/water and 80% sucrose/water.
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Information about the relevant modes is obtained using the harmonic
analysis of Eqs. 7 and 8. We first fit the 75% glycerol/water data,
which cover the widest temperature range using a single effective mode.
This procedure yields an effective frequency near 440 ± 20 cm
1. However, as Fig. 5 (dashed line) shows, there are
systematic deviations between fit and experimental data below 100 K,
where the isomer shift is not constant as predicted by the model. This result points to a further coupling of the heme to additional low-frequency modes. We thus use a two-mode model to analyze the data
following Eqs. 6-8:
|
(9) |
1 = 30 ± 20 cm
1 and at
2 = 500 ± 50 cm
1 reproduces the data of myoglobin in 75%
glycerol/water within the entire temperature range as shown in Fig. 5.
We next fit the MbCO/SUC data using the same set of parameters as
starting values. This produces reasonable agreement between data and
the model prediction. Moreover, the resulting parameters are the same
within experimental error except for
2, which increases
up to 630 ± 50 cm
1. The same model can also account
for the temperature dependence of the isomer shift of PFC, yielding
2 = 580 ± 50 cm
1. However, in this
case a single component fits the data equally well with the effective
frequency of 250 ± 20 cm
1. The respective
parameters are given in Table 1.
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Fig. 6 shows that the quadrupole splitting parameter increases steadily with the temperature up to 250 K where a strong enhancement is observed. The increase of this quantity could be interpreted as indicating a larger asymmetry of the heme environment.
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DISCUSSION |
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A major goal of our investigation was to elucidate the dynamics of
the heme-solvent coupling in the case of myoglobin and its potential
relevance to function. The most pronounced changes depending on the
temperature and the solvent concern the width of and the total area
covered by the Mössbauer resonance line. Furthermore, it is
striking that the heme iron buried in myoglobin (MbCO/SUC) and the
solvent-exposed iron of PFC display similar behavior in the temperature
dependence of their resonance lines. Quite analogous results were
reported for iron salts dissolved in glycerol/water (Parak et al.,
1989
; Nienhaus et al., 1991
; Franke, 1992
). The respective onset
temperature in this solvent was ~220 K. Similar to our results with
PFC in sucrose/water, the extra loss of area in the Mössbauer
probes in glycerol/water is accompanied by a broadening of the central
Lorentzian line and additional broad wings in the spectrum that have to
be accounted for by a second Lorentzian component. Alternatively a
single non-Lorentzian component, a Cole-Davidson function, could fit
the data just as well. Furthermore, the resulting average relaxation
times were compatible to those derived for the viscoelastic (
)
relaxation of the glycerol by other methods (Nienhaus et al., 1991
).
This result allows one to assign the line broadening to the structural relaxation of the solvent.
For myoglobin in 75% glycerol/water the onset of anharmonic mean
square displacements occurs at ~215 K (Fig. 8 a and
Franke, 1992
). The broadening of the central line becomes prominent at slightly higher temperatures between 220 K and 230 K. The viscoelastic relaxation time of 75% glycerol/water in this temperature interval decreases from 2 µs to 200 ns (Kleinert et al., 1998
), which is in
the range of the 57Fe-nuclear lifetime. This result, as in
the case of the iron salt discussed above, is consistent with the
notion that the broadening of the resonance line reflects the
viscoelastic relaxation of the glycerol/water mixture. The coupling of
the heme displacements to the solvent may involve the propionic acid
side chains of the heme, which are exposed to the solvent. With
myoglobin in the more viscous solvent, 80% sucrose/water, we observe
the same spectral features except that the onset temperature is
up-shifted to ~240 K. Significant line broadening is observed above
250 K (Fig. 3). For 80% sucrose/water at 250 K we derive a structural
relaxation of 100 ms (Kleinert et al., 1998
), which is several orders
in magnitude larger than the nuclear lifetime. Thus, in contrast to
glycerol/water, the structural relaxation of the bulk solvent does not
contribute to line broadening. In the case of PFC in sucrose/water,
however, the onset of line broadening occurs at slightly higher
temperatures, 260-265 K (Fig. 3), where the bulk viscoelastic
relaxation time has decreased to ~6 µs. In this range, line
broadening should become noticeable. The difference in the onset
temperatures therefore suggests that the microviscosity of the solvent
in the vicinity of the protein is lower than in the bulk as probed by
PFC. Such a reduction in viscosity due to preferential hydration of the
protein surface at high co-solvent concentrations has been invoked to
account for deviations from Stokes law in the kinetics of ligand
binding to myoglobin in this solvent (Kleinert et al., 1998
).
The simultaneous broadening and loss of area of the resonance line
point to an additional fast relaxation process resulting in a broad
component whose width is larger than the accessible velocity window. To
fit the data in the expanded velocity window we had to introduce a
second Lorentzian doublet. In more general terms, this effect may be
considered as the result of nonexponential relaxation together with the
experimental limitation to discriminate small spectral contributions
from the background. In the study of the iron salt in glycerol the
spectra were analyzed using a Cole-Davidson function that exhibits
high-frequency wings (Nienhaus et al., 1991
). This model could account
only in part for the loss in area. The missing area was assigned to a
fast diffusive process. Fast restructuring of the protein-water
hydrogen bond network on a picosecond time scale has been observed in
neutron-scattering experiments of hydrated myoglobin (Doster et al.,
1989
; Settles and Doster, 1996
). The anharmonic displacements of the
nonexchangeable protein hydrogen atoms show the same onset temperature
as the iron in myoglobin crystals, ~200 K, suggesting a common
mechanism (Demmel et al., 1997
).
The isomer shift
S provides additional information about
the vibrational coupling of the heme to protein and solvent modes. As
the second-order Doppler shift is biased toward high-frequency vibrations, which are much less anharmonic than modes in the range of a
few wave numbers, it its plausible that a harmonic model works quite
well in the entire range of temperatures. An effective two-mode model
with frequencies centered at 30 cm
1 and 500-600
cm
1 fits the data reasonably well and is also consistent
with known spectral features. Vibrations of surface side chains of
proteins librate with frequencies near 30 cm
1, which
leads to a prominent band in the low-frequency neutron and Raman
scattering spectra (Diehl et al., 1997
). A line shape analysis of the
Soret 

* transition of MbCO also suggest a coupling of the heme
to low-frequency modes below 50 cm
1 (
rajer et al.,
1986
). It was shown that the harmonic part of the iron mean square
displacements can be explained according to Eq. 5 using a single
dominant mode at 25 cm
1 (Wise et al., 1987
). Furthermore,
water exhibits a broad band centered at 50 cm
1 possibly
due to intermolecular flexing modes that may interact with
low-frequency protein vibrations. The situation is less transparent at
high frequencies; resonance Raman experiments have identified the Fe-CO
stretching vibration at 512 cm
1 (Tsubaki et al., 1982
),
which is close to the derived 500 cm
1 mode (Table 1). One
should also expect the Fe-His at ~220 cm
1 to contribute
to the second-order Doppler shift. However, adding this mode to the
model did not improve the fits significantly. The most interesting
aspect is the striking dependence of the high-frequency component on
the solvent composition. The main difference in the fit parameters
between 75% glycerol/water and the more viscous 80% sucrose/water is
the upshift of
2 from 500 to 630 cm
1
(Table 1). The viscosity increase between 75% glycerol/water and 80%
sucrose/water can be attributed, apart from a steric contribution, to
stronger hydrogen bonds (Demmel et al., 1997
). The increase in
2 thus indicates that the variation in the solvent force
constants affects the heme libration. It is difficult to imagine that
the Fe-CO stretching vibration should be so sensitive to the solvent composition. This would imply the presence of a bulky sucrose molecule
inside the heme pocket. More likely appears a direct coupling between
heme and solvent via the propionate side chains. In this frequency
range water displays a broad band centered at 560 cm
1 due
to hindered rotation which is strong in Raman and neutron scattering
spectra (Sokolov et al., 1995
; Settles et al., 1996
).
Fig. 6 displays the temperature dependence of the quadrupole splitting
parameter. In general, one expects the quadrupole splitting to decrease
with the temperature as a result of motional averaging of the
electrical field gradients. The opposite behavior is observed here. Two
types of explanations, may be invoked: static and dynamic. A
conformational drift with temperature affecting the local symmetry at
the heme could play a role; the infrared spectrum of CO-ligated myoglobin shows three CO stretching bands corresponding to the conformational states A0, A1, and
A3 (Johnson et al., 1996
) that differ in the
CO-HisE7 interaction. The dominant conformation at physiological pH is
A1, but a conformational drift was observed above
Tg of the solvent (75% glycerol/water),
increasing the population of the tight state A3. The
increase in the quadrupole splitting of the MbCO-Mössbauer
absorption lines may thus indicate a larger field gradient in state
A3. Wise et al. (1987)
have proposed a dynamical origin;
the effect of vibronic coupling on the electric field gradient and the
motion of the ligand can lead to a temperature-dependent quadrupole
splitting. The drastic increase in the splitting parameter at a well
defined onset temperature argues in favor of a dynamical origin.
The above results suggest a tight coupling of heme displacements,
structural relaxation of the solvent, and solvent vibrational modes.
How do these correlations affect the kinetics of ligand binding to
myoglobin? In flash photolysis experiments on CO-myoglobin, one
observes two kinetic components, a fast intramolecular recombination process and bimolecular binding from the solvent. The simplest model
involves two kinetic barriers, an outer barrier, controlling the ligand
transfer from the solvent to the heme pocket, and an inner barrier,
related to bond formation with the heme iron. In a recent flash
photolysis study of MbCO we have investigated the solvent dependence of
these barriers (Kleinert et al., 1998
). The intramolecular barrier was
found to be solvent independent. The outer barrier, however, was
changing with the solvent viscosity consistent with Kramers law of
activated escape at high friction. Fig. 7
compares kinetic data to the Mössbauer results: a) the mean
square displacements of the heme iron in two solvents and b) the escape
fraction of the ligand after photolysis. The ligand escape fraction to
the solvent NS is determined by a competition between the outer and the inner barrier. At ambient temperatures and at
low viscosity the inner barrier dominates, which leads to
NS
1. The opposite is true at high viscosity or low
temperatures, where the outer barrier dominates the temperature
dependence of NS. The figure illustrates that
the heme anharmonic displacements and the ligand displacements out of
the protein display identical temperature shifts in response to
modification of the co-solvent. This suggests that both types of
motions are connected to the same solvent structural fluctuations. The
two solvents differ mainly in their viscosity at a given temperature.
If the bulk viscosity of the solvent is the essential control variable,
one should expect identical viscosities at the respective onset
temperatures. The viscosities that are indicated in Fig. 7 a
differ, however, by several orders in magnitude. This result suggests
again that myoglobin in 80% sucrose/water is preferentially hydrated
to a larger extent than in 75% glycerol/water. The two vertical lines in Fig. 7 b denote the position of the glass temperatures of
the two solvents. The onset temperature in 75% glycerol/water is
located 40° above the glass temperature Tg,
whereas in 80% sucrose/water onset temperature and glass temperature
nearly coincide. A discrepancy of 40° is reasonable according to the
estimates of the bulk viscosity and the corresponding structural
relaxation times given above. The coincidence of the two temperatures
would imply a relevant time scale of 100 s, the characteristic
time of structural relaxation at Tg. This
process is far too slow to account for the observed ligand escape
fraction and the onset of anharmonic displacements seen by
Mössbauer spectroscopy in sucrose/water. The discrepancy can be
resolved if the microviscosity at protein-solvent interface is much
lower than in the bulk. Partial demixing of water and co-solvent in the
protein solvation shell would drastically reduce the relevant
relaxation times. Thermodynamic experiments determine a lower
preferential hydration for glycerol than for sucrose (Timasheff, 1993
,
1995
; Lin and Timasheff, 1996
). This result together with the lower
co-solvent concentration may explain why the microviscosity for 75%
glycerol/water in the solvation shell is close to the bulk value. For
80% sucrose/water our dynamic approach detects an excess number of
water molecules in the solvation shell of myoglobin as suggested by the
thermodynamic analysis. This result supports the view that the
stabilizing action of sucrose is achieved by preferential exclusion
from the protein domain. This does not, however, exclude the direct
interaction of sucrose molecules with the protein surface, which was
proposed by Carpenter and Crowe (1988a)
. On the contrary, the viscosity
of the sucrose/water solvation shell is much larger than in water,
which requires the presence of sucrose molecules. At the transition
temperature of 230 K, we expect it to be close to the viscosity of
glycerol/water at 210 K, which yields 104 Poise (Fig. 7
a). Increasing the temperature to 293 K lowers the viscosity
of the sucrose/water solvation shell to ~2 Poise. This value has to
be compared with the bulk viscosity, which is 200 Poise at room
temperature (Kleinert et al., 1998
).
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The kinetics of intramolecular bond formation of CO-myoglobin involves
a translation of the iron relative to the heme plane. The observed
solvent independence of this process (Kleinert et al., 1998
) shows that
the main iron displacements do not couple directly to the reactive
coordinate. This result is corroborated by molecular dynamics
simulations of myoglobin (Kuczera et al., 1990
) where it was found that
the out-of-plane motions contribute less than 10% to the total iron
displacements. The dominant contribution comes from a shift parallel to
the heme plane that the authors attribute to a sliding motion of the
heme as a whole in the protein cleft. Analogous results were found in a
normal mode analysis of myoglobin (Melchers et al., 1996
).
One of the unsolved puzzles in this field is related to the observation
that the kinetics of intramolecular ligand binding is always
polychromatic (Austin et al., 1975
). A distribution of activation
enthalpies, reflecting the conformational heterogeneity of the protein
structure, was invoked as a plausible explanation (Frauenfelder et al.,
1988
, 1991
), but the molecular origin of the distribution is still
obscure. We now discuss whether the local diffusion of the heme in its
protein cleft may contribute to the observed nonexponential kinetic
shape of intramolecular ligand binding. Assume that the position and
orientation of the heme that is sliding modulates the inner barrier.
The sliding motion of the heme distorts the geometry on the proximal
site of the heme via the covalent attachment of the iron to the
imidazole side chain of HisF8. This correlation is likely to induce a
cross-coupling of sliding and out-of-plane modes of the iron-porphyrin.
The respective fluctuations may be small but still large enough to
modulate the inner barrier by several kJ/mol.
If the crossing of the inner barrier by the ligand occurs on a time
scale that is faster than the viscoelastic sliding, an apparent static
distribution of barrier heights will result. The above analysis
indicates that the structural relaxation of the solvent is the main
factor that determines the rate of heme sliding. It follows that the
observed barrier distribution should change significantly when the rate
of viscoelastic relaxation starts to exceed the intramolecular binding
rate. In the case of CO-horse myoglobin in 75% glycerol/water, the
crossover takes place between 210 K and 220 K on a time scale of
~1-2 µs (Post et al., 1993
; Kleinert et al., 1998
). It is
important to stress that a single temperature-independent enthalpy
spectrum is able to reproduce the polychromatic kinetics of the final
binding step, B
A, in the temperature range between 60 K and 200 K. Above 210 K, the kinetic curves change very little with temperature in
contrast to what is derived from the enthalpy spectrum (Figs. 7 a and 9 in Post et al., 1993
). The activation enthalpy
distribution apparently becomes temperature dependent when ligand
rebinding and heme sliding start to overlap on the same time scale.
In a theoretical analysis, Sastry and Agmon (1997)
introduce a
conformational change to explain this feature, which they call collapse. The transition supposedly reduces the difference between the
equilibrium conformations of bound and deoxy hemes. Myoglobin embedded
in a trehalose glass does not show this transition, suggesting structural arrest due to the large solvent viscosity (Agmon and Sastry,
1997
). The model of an effective temperature-dependent potential fits
the data quite well. It does not, however, explain why the
solvent-coupled structural change takes place 40° above the glass temperature.
| |
CONCLUSION |
|---|
|
|
|---|
As an important result of this study we consider the observation
that the solvent-exposed iron of potassium ferrocyanide (PFC) and the
heme iron buried in the globin cleft of myoglobin display a remarkably
similar temperature dependence in their Mössbauer spectra. As the
PFC dynamics reflects essentially the viscoelastic relaxation of the
solvent, it is difficult to avoid the analogous conclusion in the case
of the heme protein. It has been previously recognized that the
displacements of the heme iron of myoglobin crystals, and of the
nonexchangeable hydrogens of D2O-hydrated myoglobin,
measured by neutron scattering, display a parallel temperature
dependence (Doster et al., 1989
). The dominant fluctuational amplitudes
of the latter were assigned to motions of polar side chains on the
protein surface (Diehl et al., 1997
). The parallel temperature
dependence then suggests that the heme motions resemble those of a
polar side chain. The role of the heme as a monitor of intramolecular
protein dynamics may have been overemphasized in the past. The slight
anharmonic increase in the displacements observed with Mössbauer
spectroscopy (Parak et al., 1987
) on dehydrated myoglobin gives an idea
of the protein-intrinsic contribution to the iron displacements, which
is in the range of 10-20% of the total amplitude.
| |
ACKNOWLEDGMENTS |
|---|
We are grateful to Prof. Dr. H. Ipser from the Institut für Anorganische Chemie, Universität Wien, for the production of 57Fe-enriched potassium-ferrocyanide. We also thank Prof. W. Petry and H. Leyser for discussion and carefully reading the manuscript.
The project was supported in part by a grant from the Bundesministerium für Forschung und Technologie (03-DO4TUM).
| |
FOOTNOTES |
|---|
Received for publication 16 October 1996 and in final form 17 August 1998.
Address reprint requests to Dr. Wolfgang Doster, Physik Department E13, TU Munchen, James-Franck-Strasse, 85748 Garching, Germany. Tel.: 49-89-2891-2456; Fax: 49-89-2891-2473; E-mail: wdoster{at}physik.tu-muenchen.de.
| |
REFERENCES |
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K. T. Schomacker, and P. M. Champion.
1986.
Spectral broadening in biomolecules.
Phys. Rev. Lett.
57:1267-1270.
Biophys J, January 1999, p. 414-422, Vol. 76, No. 1
© 1999 by the Biophysical Society 0006-3495/99/01/414/09 $2.00
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