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Biophys J, August 2000, p. 1139-1145, Vol. 79, No. 2
Crystal Phase at Near-Atomic Resolution

and
*H. H. Wills Physics Laboratory, University of Bristol,
Bristol BS8 1TL, United Kingdom;
Centre de Recherches sur
les Macromolécules Végétales, Centre National de la
Recherche Scientifique, 38041 Grenoble Cedex 9, France; and
Wood Research Institute, Kyoto University, Uji,
Kyoto 611-0011, Japan
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ABSTRACT |
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The organization of the surface of cellulose is important
in cell structure, as well as in industrial processing and
modification. Using atomic force microscopy, we show that the
I
phase of native cellulose first proposed in 1984 and
subsequently characterized by a triclinic unit cell exists over large
areas of the surface of microcrystals from Valonia, one
of the most highly crystalline celluloses. There is startling agreement
between the observed structure and crystal models, and it is possible
to identify the specific crystal face being imaged. The near-atomic
resolution images also offer an insight into structural reconstructions
at the surface compared to the interior. We are able to assign features in the images to particular side groups attached to the glucose ring
and find indications of subtle modifications of the position of surface
hydroxyls due to changes in hydrogen bonding.
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INTRODUCTION |
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Understanding the details of cellulose structure is increasingly important as the drive to use renewable resources in technological applications increases. Techniques that have probed cellulose structure have so far been of limited applicability in describing the cellulose surface, which is vitally important in many natural and industrial processes, such as enzymic hydrolysis. Scanning probe microscopy techniques, particularly atomic force microscopy (AFM), are unique in their ability to obtain high-resolution images of the surface of biological specimens under liquids. In this paper, we use AFM to compare the surface of cellulose with its crystalline interior and to demonstrate the similarities and differences that exist between them.
Native crystalline cellulose comprises chains arranged in parallel with
a twofold screw symmetry along the chains due to the
-[1,4]
linkage of the D-glucose subunits. It is now widely
accepted that two phases coexist within native cellulose I, known as
I
and I
, first
discovered by the analysis of spectral line splitting in solid-state
13C cross-polarization/magic angle spinning NMR
spectroscopy (Atalla and VanderHart, 1984
; VanderHart and Atalla,
1984
). Crystallographic studies have indexed these phases with
one-chain triclinic and two-chain monoclinic unit cells, respectively
(Sugiyama et al., 1990
). The triclinic unit cell of Sugiyama et al.
(1991)
, first suggested by Sarko and Muggli as a two-chain cell (Sarko
and Muggli, 1974
), has a single-chain P1 structure, with adjacent
molecules shifted monotonically by one-quarter of the unit cell size in the c direction. In the two-chain monoclinic unit cell, the
corner chain is shifted c/4 relative to the center chain,
such that the overall configuration displays staggering of adjacent
chains. It is not clear why there are two different crystalline
allomorphs, previously shown to coexist within single microfibrils
(Sugiyama et al., 1991
), although stresses present during biosynthesis
have been implicated (Sugiyama et al., 1990
, 1991
; Horii et al., 1997
). The I
phase, dominant in algal and bacterial
cellulose, is metastable and may be transformed into
I
via a hydrothermal annealing treatment
(Yamamoto et al., 1989
). Cellulose from the green alga Valonia
ventricosa that was used in this study is estimated to be
approximately two-thirds I
phase in the bulk
(VanderHart and Atalla, 1984
). Previous studies have shown that the
I
phase exists in small areas over the surface
of approximately several tens of unit cells, but significant long-range
order was not observed (Baker et al., 1997
, 1998
).
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MATERIALS AND METHODS |
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Sample preparation
Valonia ventricosa was harvested from a seabed in the
Florida Keys. The microcrystals were prepared according to the method of Revol et al. (1982)
.
The cellulose fragments (initial concentration 1% w/w) were
disintegrated in a Nissei AM3 homogenizer. Sulfuric acid was then added
slowly to the suspension of the fragments to achieve a final acid
concentration of 65% (w/w). The use of sulfuric acid improves the
dispersion because of the slight surface charge given to the crystallites. The internal structure of the crystallites is known from
electron diffraction experiments to be unaltered by this treatment
(Sugiyama et al., 1992
). The mixture was then heated to 70°C under
strong stirring for 30 min. The resultant dispersion was washed with
distilled water by successive centrifugation steps, until a cloudy
supernatant was observed. A final ultrasonication step was used to
complete the dispersion, and a drop of chloroform was added before the
preparation was stored.
For atomic force microscopy, the dispersions were diluted again around 100-fold with ultrapure water, and a 5-µl drop of the suspension was deposited onto APTES-mica, which had been prepared by exposing the mica surface to an atmosphere of 3-aminopropyltriethoxysilane for several hours.
Atomic force microscopy
A Digital Instruments (Santa Barbara, CA) NanoScope III
controller with a MultiMode AFM head was used to image the cellulose crystals, using the supplied liquid cell filled with water. Images were
acquired in contact mode, using commercial, unmodified silicon nitride
cantilevers with a nominal spring constant of 0.06 Nm
1. Topographic and error-signal images were
recorded simultaneously. Error-signal images enhance the high spatial
frequency components in the image and can offer improved contrast for
high-resolution imaging (Putman et al., 1992
; Baker et al., 1997
). Scan
rates were typically 10-20 Hz, with the scan angle varied to obtain optimum contrast. The images are presented with the fast-scan direction
of the cantilever oriented horizontally. The double-headed arrows shown
in some images indicate the directions of the molecules along the
crystal long axis. No filtering was used during scanning.
Image processing
The images presented are raw, unprocessed data, except for flattening and plane fitting to remove background slope (where appropriate). The only significantly processed image is the enlargement of part of Fig. 4 A, shown in Fig. 4 C, which has been rotated to align the cellulose chains vertically. Fourier filtering was also used to enhance the periodic features, which are clearly discernible in the original unprocessed image, to allow an easier comparison with the images derived from the computer modeling.
For comparison with the simulated image in Fig. 4 D, the AFM image shown in Fig. 4 C was calibrated using the known spacing along the chains between the covalently linked glucose units, such that the cellobiose repeat (1.04 nm) is identical in the two images. This calibration was performed isotropically, without attempting to correct for other scanner inaccuracies and distortions, which can be more prevalent in high-resolution imaging.
Computer modeling
The cellulose crystal models were built in
Cerius2 (Molecular Simulations Inc.) from the
atomic coordinates of Sugiyama et al. (1991)
, which had been further
characterized by molecular dynamics simulations (Heiner et al., 1995
),
with hydrogen atoms added at positions that maximize hydrogen bonding
within the crystal (Baker, 1998
). Crystal surfaces were then cleaved
from these bulk structures, and the Connolly surface (Connolly, 1983
)
generation algorithm in the Cerius2 program was
used to produce a surface mimicking an AFM topographic image (Kuutti et
al., 1994
; Baker et al., 1998
). This hard sphere analysis is not a
dynamic simulation of the compliant surface under the influence of a
real imaging tip, but it nevertheless allows the spatial positions of
the groups on the surface to be compared easily with the real image, in
both real and reciprocal space. The size of the probe rolling over the
surface in the figures presented here was 0.2 nm, comparable to the
size of a water molecule
larger probe sizes simply smoothed the
surface and revealed less detail but did not obscure the key structural
features of the surface. The size of the probe is considerably smaller
than the 20-50-nm average radius of a typical AFM tip, but the high
resolution of the images obtained is very likely due to the presence of
much smaller microasperities at the end of the tip. The generated
surfaces were exported to custom-written software to convert the
surface coordinates into a simulated AFM topographic image with
false-color height mapping.
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RESULTS AND DISCUSSION |
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Fig. 1 shows simultaneously acquired
topographic and error-signal (Putman et al., 1992
) AFM images from the
surface of a Valonia cellulose microcrystal. There are
conspicuous steps at the edge of the crystal, an observation made for
many different crystals. These steps correspond to the spacing of the
planes of cellulose molecules in the crystal; the d-spacing
of the triclinic (100) and (010) planes is 0.62 and 0.53 nm,
respectively. It is not clear whether these steps are present naturally
or have been created by stripping away chains during the isolation and
purification of the microcrystals. Cross sections through microcrystals
imaged by transmission electron microscopy show a variety of shapes
(Revol, 1982
), and it is likely that the native fibrils do not always have perfectly sharp corners, contrary to the impression sometimes given by simple models.
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The error-signal image in Fig. 1 B reveals even more detail
at the surface, because the high spatial frequencies in the image are
intensified along the horizontal fast-scan direction of the probe
(Baker et al., 1997
, 1998
). The steps are still identifiable, although
there is no indication that these are actually due to regular height
changes. More importantly, the parallel molecular chains are now easily
resolved, with detailed substructure visible along their length. The
rectangular box indicates an area of particular clarity, removed from
the steps at the edge, where a band over 10 molecules wide shows
exceptional detail. The period of the features along the chains is 1.09 nm, closely matching the cellobiose interval. This interval is due to
the twofold screw symmetry, where the alternate glucose subunits spaced
at 0.52 nm are oriented to show either the C2-C3 or the O5-C5 face of
the glucose ring. When the O5-C5 face is uppermost, the C6 hydroxyl
group on the C5 carbon of the ring, which is oriented outward into the
solvent, is a prominent topographic feature presented to the scanning
tip of the microscope. This fact enables us in principle to distinguish between the monoclinic and triclinic motifs: the "bands" oriented diagonally at ~60° to the molecular axis are characteristic of the
triclinic structure.
Fig. 2 A shows a stick
representation of the molecular structure of cellulose
I
at the triclinic (100) surface, with the
inset describing the glucose ring nomenclature. The small circle
highlights the O6 oxygen atom that is part of the exocyclic hydroxymethyl group on the C5 carbon. The diagonal alignment is unmistakable, with the c/4 displacement of the chains
bringing every fourth chain back into horizontal registry with the
starting position. We have compared the AFM images with all four faces from the two proposed crystal models, using simulated AFM images constructed from the crystal-model surfaces. Fig. 2 B shows
the same triclinic (100) crystal face as a topographic image. A
qualitative comparison of the inset fast Fourier transform with the one
shown with the image in Fig. 1 B immediately indicates the
overall similarity with the real AFM images and confirms that the
triclinic phase has been imaged.
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Two error-signal images from different crystals are shown in Fig.
3. Fourier transforms of the data are
shown to the right of each image
both of these show clearly defined
peaks extending out for five diffraction orders to 0.17 nm. No
filtering or other image processing has been used to enhance these
images. This unprecedented resolution and the sharpness of the peaks
are seen particularly in the real space image in Fig 3 A,
where there is excellent alignment of the chains over almost the entire
20 × 20 nm image, an area comparable with the width of the
microcrystals. The triclinic order is evidently preserved over many
hundreds of unit cells, a significant observation because diffraction
techniques are unable to give such localized information about the size
of I
and I
domains.
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Fig. 4 highlights the compelling
agreement between the real and model images. The bands indicating the
triclinic phase and the twofold screw symmetry are easily seen in both
the height image (Fig. 4 A) and error-signal image (Fig. 4
B). In Fig. 4 C the boxed area shown in Fig. 4
A has been enlarged and rotated to align the chains
vertically. The image was Fourier filtered before enlargement, and only
the clearly defined spectral peaks identified in the Fourier transform
were preserved
high-frequency noise was therefore eliminated, and
distracting, low-frequency topographic changes were removed to leave a
planar surface. In Fig. 4 D, the simulated topographic image
of the surface shown in Fig. 2 has been enlarged to the same
magnification and low-pass filtered to restrict the spatial frequency
range to be similar to the processing applied to the image in Fig. 4
C. The correspondence between these images is startling. The
1.04-nm cellobiose repeat is immediately obvious and is indicated in
Fig. 4 C by the length of the arrowed line. A circle on the
real image (blue) marks a high peak due to O6 of the
hydroxymethyl group, with two O2 groups encircled above and below,
displaced slightly to the left. The circles drawn on the simulated
image (green) show that O6 is positioned rather closer to O2
than it is in the real image. The exact position of these points
depends on the torsional angles of the hydroxyl groups and the
positions of the hydrogen atoms
the model in Fig. 4 D uses
hydrogen atoms positioned to achieve maximum hydrogen bonding within
the bulk crystal, where the hydroxymethyl is in the tg
conformation. (The conformation of the O6 hydroxymethyl group is
defined by two characters. The first refers to the O5-C5-C6-O6 torsion
angle, and the second to the C4-C5-C6-O6 angle. Possible conformations
are gg, gt, and tg, where g
is gauche and t is trans.) Detailed
molecular dynamics simulations elsewhere have studied the influence of
water on the cellulose surface structure (Heiner et al., 1998
;
Kroon-Batenburg and Kroon, 1990
; Heiner and Teleman, 1997
). In water,
the tg conformation favored in the bulk is less populated
than the preferred gauche states. Solid-state
13C NMR also suggests that the cellulose surface
will be more mobile than in the crystal and that a gt
conformation may be more predominant at the surface (Newman and
Hemmingson, 1994
). The gray inset in Fig. 4 D shows the
effect of rotating the hydroxymethyl group around the C5-C6 bond into a
gt position, and it is noticeable that the position of the
surface groups more closely represents the organization in Fig. 4
C, which may be seen by comparing the positions of the
circles drawn on the images. Similarly, the gg position (not
shown) also makes a better comparison with the AFM data. Other
modifications with the remaining hydroxyl groups and backbone torsions
may also be considered, although the most significant effect is seen
with O6, because of the additional distance from the ring afforded by
the CH2 linker. We suggest that, in the
particular example shown here and under these imaging conditions, it is
likely that the hydroxymethyl group is in a different position on the hydrated surface compared with the region inside the crystal. There are
other possible effects that may contribute to our observation, but the
data presented here are exciting, because for the first time they
demonstrate visually these types of surface reconstruction for
cellulose and that AFM is capable of resolving these intricacies.
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The degree of topographic modulation between and along the chains also
shows impressive agreement. The tight lateral packing of the chains is
exemplified in Fig. 4, C and D, by the fact that the probe does not penetrate deeply between the chains. Along the
chains, topographic variation is much greater. Careful analysis of the
seven best images taken from two different crystals shows that the
dimensions on all of the images correspond most closely with the
triclinic (100) face (Baker, 1998
). The interchain spacing is always
closer to the d010 spacing of 0.53 nm,
corresponding to an angle on the surface of 63° for the (100) face,
compared to d100 on the (010) face
where the chains spaced at 0.62 nm produce a larger angle of 67°. The
(100) face is expected to be seen more frequently in AFM images due to
the well-described "uniplanar orientation" phenomenon for these
Valonia microcrystals, where the majority of the
microcrystals have the (100) face oriented parallel to the mica support
substrate (Sugiyama et al., 1984
). Although the results reported here
are encouraging in that respect, they are not statistically
significant, and more crystals would need to be analyzed to confirm
this result.
If native cellulose has two crystalline allomorphs, should we not also
see the I
(monoclinic) phase at the surface?
Other authors have reported the monoclinic structure, although their images, obtained in air, are far less clear, and the expected real-space motif was not discerned (Kuutti et al., 1994
). Acquiring high-quality images where structure can be clearly identified takes
considerable time, and at present there are insufficient data to
statistically apportion images of the crystals to the two phases.
Interestingly, there is an increasing body of evidence from other
techniques that the size and location of the triclinic and monoclinic
nanodomains are species dependent. A recent electron microdiffraction
study suggested that the monoclinic phase might exist at the interface
between triclinic regions (Imai and Sugiyama, 1998
). If this is the
case, the surface may only be composed of the
I
phase, so that there is actually very little
I
present on the surface. Furthermore, after
enzymic degradation or acetylation of Valonia, there is an
increase in the proportion of the I
phase
(Hayashi et al., 1998a
,b
; Sassi, 1995
), which may suggest that the
I
phase is more abundant at the surface. These
questions certainly require further investigation.
In general, AFM images of the surface of the Valonia
microcrystals that we have examined do not show such extreme order over the entire surface (Baker et al., 1997
). Within single images taken at
lower magnification, regions of the surface with greater disorder are
often seen. Results from NMR also indicate that the surface may, in
general, be less ordered than the interior and that there is greater
mobility at the surface, although the assignment of spectral peaks to
surface and interior configurations is a complicated issue, and new
interpretations are still being put forward (Wickholm et al., 1998
;
Newman, 1998
). It is clear from the images presented that on some areas
of the surface, the molecular chains are highly organized, as also
suggested by the low surface reactivity of Valonia and
bacterial cellulose (Verlhac et al., 1990
). Indeed, the overall level
of order on the truly native surface may be even greater still, as the
sample preparation procedures may have disrupted some parts of the surface.
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CONCLUSIONS |
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The most striking result that we have presented here is that the triclinic structure has been revealed directly in real space over very large areas of the crystal surface, where the degree of order is very high. The close correspondence between topographic models and real data is impressive, and, moreover, the structural comparison between the bulk crystal and its surface demonstrates remarkable changes in the position of the exocyclic hydroxyls, presumably due to changes in hydrogen bonding when the surface is solvated. The precise role of the tip and the imaging conditions on this observation requires further investigation, but nevertheless we have clearly demonstrated near-atomic resolution on this important biological specimen. Understanding the relationship between biosynthesis and structure remains one of the most important goals in cellulose research, where scanned probe techniques will surely continue to play an exciting role.
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ACKNOWLEDGMENTS |
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We thank Dr. H. Chanzy and Dr. T. J. McMaster for their critical appraisals of the manuscript and for helpful discussions.
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FOOTNOTES |
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Received for publication 20 January 2000 and in final form 17 April 2000.
Address reprint requests to Dr. Andrew A. Baker, H. H. Wills Physics Laboratory, University of Bristol, Bristol BS8 1TL, UK. Tel.: 44-117-928-8743; Fax: 44-117-925-5624; E-mail: andy.baker{at}bristol.ac.uk.
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REFERENCES |
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component in Cladophora cellulose with Trichoderma viride cellulase.
Carbohydr. Res.
305:109-116
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studied by molecular dynamics simulation.
Carbohydr. Res.
273:207-223
and I
in algal microfibrils.
Macromolecules.
31:6275-6279
Biophys J, August 2000, p. 1139-1145, Vol. 79, No. 2
© 2000 by the Biophysical Society 0006-3495/00/08/1139/07 $2.00
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