Department of Chemistry, Massachusetts Institute of Technology,
Cambridge, Massachusetts 02139 USA
T-cell activation is essential for initiation and control
of immune system function. T cells are activated by interaction of
cell-surface antigen receptors with major histocompatibility complex
(MHC) proteins on the surface of other cells. Studies using soluble
oligomers of MHC-peptide complexes and other types of receptor
cross-linking agents have supported an activation mechanism that
involves T cell receptor clustering. Receptor clustering induced by
incubation of T cells with MHC-peptide oligomers leads to the
induction of T-cell activation processes, including downregulation of
engaged receptors and upregulation of the cell-surface proteins CD69
and CD25. Dose-response curves for these T-cell activation markers are
bell-shaped, with different maxima and midpoints, depending on the
valency of the soluble oligomer used. In this study, we have analyzed
the activation behavior using a mathematical model that describes the
binding of multivalent ligands to cell-surface receptors. We show that
a simple equilibrium binding model accurately describes the activation
data for CD4+ T cells treated with MHC-peptide oligomers
of varying valency. The model can be used to predict activation and
binding behavior for T cells and MHC oligomers with different properties.
 |
INTRODUCTION |
In recognition of and response to foreign
antigens, CD4+ T cells have an important role in
the immune system. CD4+ T-cell activation is
triggered upon specific interaction of T-cell surface receptors (TCR)
with foreign antigens bound to class II major histocompatibility
complex (MHC) proteins found on the surface of B cells, macrophages,
and other antigen-presenting cells (Germain, 1994
; Davis et al., 1998
).
MHC-TCR engagement triggers a cascade of signaling events, including
phosphorylation of receptor subunits, docking of receptor-associated
signaling and adapter proteins, activation of cytoplasmic signaling
cascades, and up-regulation of several gene products (Cantrell, 1996
;
Qian and Weiss, 1997
). The complete activation program also requires
participation of antigen-independent adhesion and costimulatory
molecules from both the T cell and antigen-presenting cell (Chambers,
2001
), which can lead to formation of cell-surface supramolecular
activating clusters or "immune synapses" (van der Merwe et al.,
2000
), and eventually cytokine secretion, clonal proliferation, and
induction of other T-cell effector functions required to help clear the foreign antigen from the host.
The precise molecular events that induce T-cell triggering upon TCR
ligation are not well understood, but substantial evidence points to
receptor clustering as an important component of the signaling in this
system (Germain, 1997
). Early studies showed that antibody-mediated
clustering of TCR (Janeway, 1995
), or clustering of chimeric TCR
cytoplasmic domains (Irving and Weiss, 1991
; Letourneur and Klausner,
1991
) could trigger T-cell activation processes. More recently, soluble
MHC-peptide oligomers have been used as reagents to investigate T-cell
activation processes (reviewed in Cochran et al., 2001a
). These
reagents include antibody-linked MHC dimers (Abastado et al., 1995
),
dimers created through chimeric fusions of MHC-peptide complexes to
antibody Fc domains (Casares et al., 1999
; Appel et al., 2000
; Hamad et
al., 1998
), streptavidin-linked oligomers of biotinylated MHC-peptide
complexes (Boniface et al., 1998
; Crawford et al., 1998
), and a series
of chemically-defined MHC dimers, trimers, and tetramers prepared using
flexible peptide-based cross-linkers (Cochran and Stern, 2000
). These
studies demonstrated that multivalent TCR engagement is necessary for
CD4+ T-cell triggering, with an MHC dimer as the minimal
activating unit (Cochran et al., 2000
; Boniface et al., 1998
). T-cell
activation induced by such soluble oligomeric reagents exhibits
nonsaturating, bell-shaped dose-response curves (Cochran et al.,
2000
), but these activation relationships have not been related to
binding constants or other molecular properties of the system.
Moreover, fluorescent MHC oligomers increasingly are used to track
antigen-specific T-cell populations in clinical samples (Ferlin et al.,
2000
; McMichael and O'Callaghan, 1998
), and understanding the
correlation between binding levels and molecular properties such as
MHC-TCR affinity or TCR clustering is urgently needed.
To gain insight into the binding behavior of MHC oligomers, and the
relationship between MHC-TCR binding and the resultant activation
response, we have applied a simple receptor cross-linking model
developed originally for characterization of equilibrium binding of
multivalent ligands to receptors on mast cells (Perelson, 1981
). Here,
we show that the model accurately describes the behavior of soluble MHC
oligomers in inducing activation processes in T cells for a variety of
oligomer valencies, MHC-TCR affinities, and cross-linking strategies.
The striking correlation of the model with the experimental data in
this system shows that several T-cell responses are directly related to
the number of multivalently engaged receptors. The behavior of the
model under different experimental conditions suggests possible
mechanisms for the cellular regulation of antigen sensitivity in T cells.
 |
MATERIALS AND METHODS |
Preparation of class II MHC-peptide oligomers
HLA-DR1
and
extracellular domains (Cochran and Stern,
2000
) were expressed in Escherichia coli cells as inclusion
bodies, solubilized in 8 M urea, purified by ion exchange, and refolded by dilution of the denaturant under redox-controlled conditions in the
presence of peptide, as previously described (Frayser et al., 1999
).
Cysteine residues introduced into the
or
subunit C-termini
(
cys,
cys,
Lcys, and
Lcys) were
used for cross-linking. In some experiments, the cysteine was
introduced immediately after the membrane proximal immunoglobulin
domain (
cys,
cys); in
others, the 5-10-residue connecting-peptide region was included before the cysteine (
Lcys,
Lcys). Antigenic peptide Ha[306-318]
(PKYVKQNTLKLAT) derived from influenza hemagglutinin (Lamb et al.,
1982
), control peptide A2[103-117] (VGSDWRFLRGYKQYA) (Chicz et al.,
1992
), and cross-linkers X3X (f
EK'SGSK'G) and X14X
(f
EK'SGSGESGSEGSSEGK'G) (Cochran et al., 2001b
) and related
trivalent and tetravalent peptide-based cross-linkers (Cochran and
Stern, 2000
), where f
is fluoresceinyl-
-alanine and K' is
N(
)aminocaproylbenzylmaleimide lysine, were synthesized
using 9-fluorenylmethoxycarbonyl (FMOC) chemistry, purified by
reverse-phase high-performance liquid chromatography, and verified
using mass spectrometry. The refolded HLA-DR1-peptide complexes
carrying a cysteine on either the
or
subunit were oligomerized
by reaction of the introduced thiols with maleimidyl groups on the
peptide-based cross-linkers. Cross-linker was added in small aliquots
to freshly-reduced MHC protein at room temperature over a period of
five hours to a final molar ratio of MHC:cross-linker of 2:1 for
dimers, 3:1 for trimers, and 4:1 for tetramers (Cochran and Stern,
2000
). Purified MHC-peptide oligomers were isolated using two Superdex
200 HR 10/30 columns (Pharmacia, Peapack, NJ) in series, and further
characterized by SDS-PAGE (Cochran and Stern, 2000
). For binding
assays, fluorescent MHC-peptide monomers were prepared by reaction of
the HLA-DR1-introduced cysteine residue with fluorescein-malemide
(Pierce, Rockford, IL) followed by purification by gel filtration
chromatography (Cochran and Stern, 2000
).
T-cell activation and binding assays
The T-cell clone HA1.7 (Lamb et al., 1982
) used in many of the
experiments presented herein is specific for the Ha peptide bound to
HLA-DR1, and was maintained by biweekly stimulation with peptide-pulsed
irradiated antigen-presenting cells and rested seven days before
activation assays (Cochran et al., 2000
). Two HLA-DR1-restricted,
Ha-peptide specific, T-cell clones, Cl-1 (Sette et al., 1994
) and
HaCOH8 (gift of Corrine Moulon, Warner-Lambert, Paris), and a
short-term polyclonal T-cell line, HA03 (Cameron et al., 2001
), were
maintained similarly. T-cell activation assays were performed as
previously described (Cochran et al., 2000
). Briefly, MHC-peptide
oligomers were added to 7.5 × 104 T cells
in round-bottom 96-well plates and incubated at 37°C, 7%
CO2. After the desired incubation time, cells
were placed on ice and stained concurrently with fluorescent monoclonal
antibodies against T cell surface markers: R-phycoerythrin (PE)-labeled
anti-CD3 (UCHT-1) and allophycocyanin (APC)-labeled anti-CD69 (FN50) or APC-anti-CD25 (M-A251) (all from Pharmingen, San Diego, CA). Cells were
washed with phosphate-buffered saline (1 mM
KH2PO4, 10 mM Na2HPO4, 137 mM NaCl, 3 mM
KCl, pH 7.4) containing 1% fetal bovine serum and 0.1% sodium azide
and analyzed by flow cytometry. Fluorescence data were obtained with a
Becton-Dickinson FACS Calibur flow cytometer and analyzed using Cell
Quest software. The number of MHC-peptide complexes bound during the
course of the T-cell activation assay was measured simultaneously with
T-cell activation markers using the fluorescein molecules incorporated
into the cross-linkers and multicolor flow cytometry (Cochran et al.,
2000
). The number of CD3 molecules downregulated upon oligomer
treatment, and the number of MHC-peptide complexes bound per cell,
were converted from mean fluorescence using SPHERO Rainbow calibration
particles (Spherotech, Libertyville, IL) containing known amounts of PE and fluorescein equivalents.
Generation of calculated cross-linking and binding curves
For a given KX,
KD, and
Rtot, the implicit equation for
Req (see Eqs. 1 and 2 below) was
solved numerically for each valency of oligomer and each concentration
using the secant method (Kreyszig, 1993
). That value was then used to
calculate the number of oligomers bound per cell with each possible
valency. The calculations were performed using programs created in
FORTRAN 77 and MAPLE V.
xlink, Rmulti,
Rdimer, and
Lbound were calculated from binding
distributions as described in the Model section of this paper.
Fitting experimental activation and binding data
Fits of the model to the experimental sets were solved by a
three-parameter minimization of KX,
KD, and scale factor, using known
Rtot. Minimization reduced the total
2 by iterative testing of combinations of
parameter values one interval above and below the current values of
KD,
KX, and scale factor, and adopting the
combination with the lowest
2 as the new
values. The interval was reduced until convergence. A wide range of
initial guesses was tried for each data set to ensure uniqueness of the
fit parameters. The uncertainty for each parameter,

, was determined by
where N is the number of measurements used for the
fit, n is the number of parameters being fit by the program,
and the
2 values correspond to the values
calculated with the parameter p varying about the best fit
value by the interval
(Bevington, 1969
).
MODEL
Distribution of bound states for a multivalent ligand of a
cell-surface receptor
A simple equilibrium model that describes the interaction of
multivalent ligands with cell-surface receptors was used to simulate activation dose-response curves. Binding and cross-linking parameters were obtained by least-squares fitting of curves to experimental binding and activation data. This model was originally developed to
describe general receptor binding by multivalent ligands, and has been
applied to the release of histamine from basophils (Perelson, 1981
), a
response that requires receptor cross-linking (DeLisi and Siraganian,
1979
). Similar models have been used to fit data for IgE-Fc
receptor
clustering (Hlavacek et al., 1999
), dissociation of insulin and nerve
growth factor from their cross-linked receptors (DeLisi and Chabay,
1979
), viral attachment to cell-surface receptors (Wickham et al.,
1990
), and dimeric MHC-peptide complexes binding to
CD8+ T cells (Fahmy et al., 2001
).
The model describes the distribution of different bound states of a
multivalent ligand interacting with a monovalent receptor (Fig.
1). For example, a ligand dimer may be
bound monovalently (21) or divalently
(22), assuming that both ligand units can
bind simultaneously, or it may not be bound at all
(20, Fig. 1, top). Similar
states can be described for a ligand tetramer (Fig. 1, bottom). The model can be used to describe the relative
amounts of these states under different conditions. The monovalent
binding of a ligand to its receptor is characterized by the equilibrium dissociation constant KD (units of
molarity). The tendency for multivalent binding is assigned to the
cross-linking constant KX (units of
(#/cell)
1), with the assumption that binding of
each additional monomer within the oligomer is described by the same
constant. The actual independent modeling parameter is
, the
unitless product of the receptor density
(Rtot/A, units of
(area)
1, where A is the surface area
of the cell) and a 2-dimensional equilibrium-binding constant
(KX * A, units of area).
Because the receptor density is less convenient to measure
experimentally than the number of receptors per cell, we report the
cross-linking constant KX =
/Rtot. The model also assumes that
rapid binding equilibrium is attained, and that the free ligand
concentration is not significantly depleted by binding to cell surface
receptors. At the cell densities conventionally used in these
experiments (1-5 × 106 cells/mL), ligand
is not significantly depleted for ligand concentrations greater than
10
10 M, even at 100% receptor occupancy.

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FIGURE 1
Schematic description of oligomer binding for a dimer
(top) and a tetramer (bottom). The top
row shows a dimer binding sequentially to monomeric cell surface
receptors. The terminology for the binding state is shown above each
oligomer. The bottom panels show the same scheme for a tetramer binding
sequentially to monomeric cell surface receptors.
|
|
Calculation over a range of concentrations yields the distinctive
distribution of the various bound states, which is sensitive to changes
in KD,
KX, and the total receptor number
(Rtot). At equilibrium, the amount of
oligomer with valency (v) that is bound using i
ligands can be found by (Perelson, 1981
)
|
(1)
|
where
i,eq is the number of oligomers
of valency v bound i times per cell at
equilibrium, L0 is the bulk
concentration of oligomer, and Req is
the number of unbound receptors per cell at equilibrium. The value of
Req must be found from the numerical solution of
|
(2)
|
and Rbound is found by
|
(3)
|
Several related parameters describing the system can be
extracted from this type of calculation. For example, the number of
cross-links (
xlink) formed by oligomers bound
multivalently can be calculated as
|
(4)
|
This is the original measure that was used in previous studies
(Perelson, 1981
; Hlavacek et al., 1999
). A tetramer bound divalently is
considered to have one cross-link, whereas one bound trivalently has
two cross-links. In addition, the number of cross-linked receptors
(Rmulti), i.e., those associated with oligomers
bound multivalently, can be found by
|
(5)
|
The number of discrete receptor dimers per cell
(Rdimer) can be found using
|
(6)
|
A tetramer bound tetravalently forms two discrete receptor
dimers, whereas one bound trivalently forms only one. Finally, the
total number of oligomers bound per cell
(Lbound) can be calculated using
|
(7)
|
Theoretical distribution curves
The predicted distribution of bound states as a function of
concentration for fixed KX,
KD, and
Rtot values is shown for a dimeric
ligand in Fig. 2, A,
B, and C, and for a tetrameric ligand in Fig. 2,
D, E, and F. The plots in Fig. 2 were
calculated using the same Rtot (24,000 per cell) and KD (1.4 µM) values,
but with three different values for
KX. When the cross-linking tendency (KX) is low (2.0 × 10
5 per cell
1), as in
Fig. 2, A and D, the fraction of oligomers bound
multivalently (using two, three, or four ligands) is low. The number of
ligands bound monovalently rises rapidly to saturation with increasing ligand concentration. In the tetramer plot (Fig. 2 D), the
dashed line representing the sum of ligands bound multivalently
(Rmulti) is similar to the symmetric
plot of divalently bound tetramers (42),
because few or no trivalently (43) or
tetravalently (44) bound oligomers are
present. When the tendency to cross-link
(KX) is ten-fold higher, as in Fig. 2,
B and E, significant amounts of di-, tri-, and
tetramerically bound ligands accumulate at intermediate concentrations,
and decrease at higher concentrations. The decrease at high
concentrations can be understood by considering that mass action drives
the formation of monovalently bound oligomers at high concentrations of
ligand. In the tetramer plot (Fig. 2 E, solid
line), the curve describing the total number ligands bound multivalently (Rmulti) begins to show
some discernible asymmetry with a shallower slope at low ligand
concentration and a sharper slope at high concentration. In Fig. 2,
C and F, the cross-linking tendency
(KX) is again raised by 10-fold, and
the asymmetry of the multivalently bound curve in Fig. 2 F
is even more pronounced. The curves representing oligomers bound with
their maximum valency rise rapidly with concentration. These oligomers
remain maximally bound with increasing concentration, and are only
slowly replaced by oligomers bound with lower valency, and then by
monovelently bound oligomers. The curve describing monovalently bound
oligomer rises at an even higher concentration than for lower
KX, because it is even more difficult
for a monovalent interaction to compete with multivalent interactions
of bound oligomers.

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FIGURE 2
Binding distribution plots. The distribution of
variously bound oligomers as a function of oligomer concentration is
shown in terms of the number of MHC molecules bound.
(A-C) The behavior of a dimeric ligand
binding to monovalent cell surface receptors as the cross-linking
capacity KX increases in each panel as shown
above the plots. (D-F) The behavior of a
tetrameric ligand binding to monovalent cell surface receptors.
Oligomers bound monomerically ( ), dimerically ( ), trimerically
( ), and tetramerically ( ), are shown. The solid line on the
tetramer plots D-F represents the sum of
the multivalently bound oligomers, Rmulti.
|
|
The effect of varying parameters other than
KX also can be determined. If the
KD is reduced by a factor of ten, the
result is a linear shift of the curves to lower concentrations.
Increasing KD shifts the curves in the
opposite direction. Alternatively, if
Rtot is changed ten-fold, an identical
effect on the shape of the curves is observed as for the corresponding
change in KX; however, the height of
the curve will be scaled to correspond to the increased number of
receptors per cell.
 |
RESULTS |
Analysis of experimental dose-response curves for activation of a
T cell clone by a series of MHC oligomers
To investigate the molecular triggering mechanism of T-cell
activation, we have previously developed a series of chemically-defined MHC-peptide oligomers of the human class II protein HLA-DR1 (Cochran and Stern, 2000
) and used these to trigger activation processes in the
well-characterized, influenza-specific human T-cell clone HA1.7 (Lamb
et al., 1982
). This series of MHC dimers, trimers, and tetramers was
prepared using synthetic peptide-based cross-linking reagents that were
designed to be flexible and to allow simultaneous binding of multiple
MHC molecules to the T-cell surface. Activation processes induced by
these oligomers were measured as changes in cell surface expression of
activation markers detected by multicolor flow cytometry. The
dose-response of T-cell activation induced by MHC dimers, trimers, and
tetramers was measured for three activation markers: downregulation of
T-cell receptor subunits (CD3) (Valitutti et al., 1997
), upregulation
of a T-cell-associated lectin-like protein conventionally used as an
early T-cell activation marker (CD69) (Testi et al., 1994
), and
upregulation of the interleukin-2 receptor
subunit involved in the
autocrine proliferative response (CD25) (Waldmann, 1989
). The
dose-response for T-cell activation triggered by each of the oligomers
displayed a bell-shaped curve (Cochran et al., 2000
) similar to those
predicted by the simple equilibrium binding model. Increasing oligomer
size caused a shift in the activation maximum to lower concentration
and an increase in the maximum amplitude, behavior characteristic of
the model applied here (Perelson, 1981
).
The dose-response curves were fit using the model described above,
using an experimentally determined value (24,000) for
Rtot, the number of receptors per
untreated T cell. Figure 3 shows the fits
of the predicted Rmulti values to
experimental data for CD3 downregulation in the HA1.7 T cell clone
(Cochran et al., 2000
) measured at 12 and 27 h, respectively,
after addition of MHC oligomers to the T cell culture. Filled symbols
indicate the experimental data (diamonds, dimers;
triangles, trimers; squares, tetramers), and
smooth curves represent the predicted number of TCR multivalently bound
(Rmulti) using best-fit values for
KD,
KX, and a scale factor relating
Rmulti to the experimental measure of
internalized TCR. The curves obtained from a single experiment with
different oligomers were fit simultaneously. The predicted curves fit
well to the experimental data to within the expected uncertainty of the
measurements. Best-fit parameters for data collected at different times
after oligomer addition are similar:
KD = 1.4 ± 0.1 µM (12 hr) or
KD = 1.7 ± 0.4 µM (27 hr), and
KX = 1.92 ± 0.05 × 10
4 per cell
1 (12 hr)
or KX = 3.15 ± 0.01 × 10
4 per cell
1 (27 hr)
(Table 1). The scale factor relating the
predicted number of multivalently-engaged receptors to the experimental
number of downregulated receptors was 0.776 ± 0.001 at 12 hr and
0.996 ± 0.001 at 27 hr. The value of the scale factor approaches
one at long incubations, indicating that all engaged receptors
eventually become downregulated as part of the T-cell activation
program, as suggested by cellular studies (Valitutti et al., 1997
;
Germain, 1997
). The extracted values for
KD are within the range of affinities reported for other class II MHC-TCR systems determined by direct binding measurements using soluble receptors and ligands (Davis et al.,
1998
). The extracted values for KX,
and for the dimensionless value
= KX * Rtot, are comparable to those observed
in other systems (Hlavacek et al., 1999
; Wickham et al., 1990
; Fahmy et al., 2001
). For example, the KX
determined for IgE-Fc
receptor cross-linking by multivalent antigen
was 1.35 × 10
5 per
cell
1 (Hlavacek et al., 1999
), and for the
attachment of adenovirus to HeLa cells, a
KX of 5 × 10
3 per cell
1 was
calculated (Wickham et al., 1990
). These values correspond to
values of 13 and 30, respectively. The
values determined for
binding of class I MHC-IgG fusion proteins to
CD8+ T cells range from 1 to 73 for cells in
different activation states (Fahmy et al., 2001
). Our values of
= 4-8 are within the range observed in these systems.

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FIGURE 3
Comparison of experimental CD3 downregulation data and
model predictions. The predicted sum of multivalently bound oligomers
at each concentration was fit to experimental CD3 downregulation data
for treatment with a dimer ( ), trimer ( ), and tetramer ( )
(Cochran et al., 2000 ). (A) The response of HA1.7 T
cells at 12 h of incubation with the oligomers. (B)
The response at 27 h of incubation with the oligomers. Best fit
parameters shown in Table 1.
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TABLE 1
Binding and cross-linking parameters for several
experimental markers of T-cell activation for the clone
HA1.7*
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|
Activation of HA1.7 T cells measured using other markers could also be
described by the model. Upregulation of the early activation marker
CD69 also was described by the model, although the data are noisier
(Fig. 4 A). This fit yielded
a KD of 1.4 ± 0.6 µM, and a
KX of 2.3 ± 0.6 × 10
4 per cell
1 (Table
1), values similar to those obtained for CD3. If the CD3 downregulation
and CD69 upregulation data are correlated, a linear relationship is
seen with a slope of roughly 0.035 between the two (Fig.
4 B). This corresponds well with the ratio of the fit scale
factors (0.027). Upregulation of CD25, the low-affinity IL-2 receptor,
was not described well by the model using a linear scale factor (not
shown). However, the plot of CD25 (IL-2R) upregulation versus CD3
downregulation did not exhibit a linear relationship as observed for
CD69 with CD3, but rather a distinct curve (Fig. 4 C). A
best-fit quadratic function was found for the relationship of CD3 and
CD25, and that function was applied to the model predictions to better
represent the behavior of the data. After this application, the CD25
upregulation data were fit well by the model (Fig. 4 D),
giving best-fit values for KD
(1.8 ± 0.3 µM) and KX
(3.00 ± 0.01 per cell
1) (Table 1). Again,
these values were similar to those observed for the other markers.

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FIGURE 4
(A, B) CD69 and
(C, D) CD25 upregulation data and model
predictions for a T cell clone. (A) The predicted sum of
multivalently bound oligomers at each concentration was fit to
experimental HA1.7 CD69 upregulation data for treatment with a dimer
( ), trimer ( ), and tetramer ( ) (Cochran et al., 2000 ).
(B) The relationship between CD69 and CD3 responses with
a best fit line. The linear relationship suggests that a single scale
factor could be used to relate CD69 response to
Rmulti. (C) The relationship
between CD3 and CD25 responses with a best-fit quadratic curve. The
curved relationship suggests that CD25 response is not directly related
to Rmulti, and a quadratic filter was used
to relate the model predictions to the data. (D) The
experimental HA1.7 CD25 response to the dimer ( ), trimer ( ), and
tetramer ( ) treatments fit using a quadratic filter based on the
relationship in (C). Parameters for the fits are shown in Table 1.
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|
Thus, a good correlation was observed between the predicted number of
cross-linked receptors (Rmulti) and
the scaled experimental data (R2 = 0.99) as shown in Figs. 3 and 4. We also fit each of the data sets
using the number of cross-links (
xlink), or
the number of distinct dimers formed
(Rdimer), instead of the number of
cross-linked receptors. Although these fits were slightly less good
(not shown), the experimental data are not sufficiently precise to be
able to distinguish definitively between the different measures.
Analysis of other T-cell clones and MHC cross-linking
strategies
Additional tests of this model were performed using two other
influenza-specific T-cell clones, Cl-1 and HACoH8, and also a
short-term polyclonal influenza-specific T-cell line raised from the
peripheral blood of a DR1+ homozygous individual,
HA03 (Fig. 5). The dose-response of CD3 downregulation for the MHC oligomer series was measured for Cl-1 and
HACoH8 after 24 hr (Fig. 5, A and B) and for HA03
after 12 hr (Fig. 5 C). For Cl-1, the CD3 downregulation
dose-response curves were best-fit using
KD = 5.00 ± 0.01 × 10
5 M and KX = 3.10 ± 0.01 × 10
4 per
cell
1 (Table 2).
These values are significantly different from those observed for HA1.7,
particularly for KD. The other T-cell
clone, HACoH8, exhibited KD = 1.80 ± 0.07 × 10
6 M, and
KX = 42.2 ± 1.4 × 10
4 per cell
1 (Table
2). In this case, the KX value is
substantially different from those observed for the other clones.
Finally, the polyclonal line HA03 exhibited best-fit values of
KD = 1.60 ± 0.04 × 10
5 M and KX = 0.96 ± 0.04 × 10
4 per
cell
1 (Table 2). These data show that
KD and
KX values can vary among different
T-cell lines, and that the model can describe these differences.

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FIGURE 5
CD3 response in other T cells. These plots show the CD3
downregulation response to dimer ( ), trimer ( ), and tetramer
( ) for the T cell clones (A) Cl-1 and
(B) HACoH8 and for the (C) polyclonal
cell line HA03. The smooth curves show the model fits for these data
sets. Model parameters for these fits are shown in Table 2.
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Another set of class II MHC oligomers has been used to investigate the
effect of receptor proximity and orientation on T-cell activation
(Cochran et al., 2001b
). In this series, MHC dimers were linked using a
direct disulfide bond between cysteines introduced at the end of the
or
subunit, or using peptide-based synthetic cross-linkers of
varying length. Dimers linked through either the
or
subunits,
using either a disulfide bond (S-S) or a long cross-linker (X14X),
were tested for their ability to induce CD3 downregulation in the HA1.7
T-cell clone (Fig. 6). Dose-response curves for these dimers exhibited characteristic bell-shaped curves, with the S-S dimers (closed symbols) activating more
potently than the X14X dimers (open symbols), with more
activation induced at lower concentrations and a higher maximum
response. The activation data were described well by the binding model
(lines). Because the cross-linking site is remote from the
peptide-binding region, the cross-links are not expected to interfere
with the TCR interaction, and a single
KD value was globally fit to the
curves. The KX was allowed to vary
between the curves. The KD extracted
from these curves (1.61 ± 0.31 µM) was consistent with other
KD values obtained for the HA1.7
T-cell clone. However, the best-fit KX
varied significantly within the series, with values (per
cell)
1 of 18.6 ± 0.8 × 10
4 (
S-S), 10.2 ± 0.2 × 10
4 (
S-S), 3.15 ± 0.02 × 10
4 (
X14X), and 3.79 ± 0.03 × 10
4 (
X14X) (Table
3). The
KX was greater for the S-S dimers, in which the MHC monomer units are positioned close together, and lower
for the X14X dimers, which are more loosely tethered by the long,
flexible linker. Thus, the KX
parameter appears to reflect more facile receptor cross-linking for the
more compact dimers, as expected by their geometrical constraints.

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FIGURE 6
CD3 response to MHC dimers with different length
cross-links. This plot shows the CD3 downregulation in response to
directly disulfide-bonded S-S dimers linked through the
cys ( ) or the cys ( ) cysteine, and
X14X dimers connected by a long flexible linker between the
cys ( ) or cys ( ) cysteine. The
smooth lines show the model fit to the data. Best-fit parameters are
shown in Table 3.
|
|
Analysis of binding and competition data
In addition to the number of multivalently-bound receptors
Rmulti, the model can be used to
predict the number of bound ligands, Lbound. This parameter is a sum over
all of the variously bound states, and would be expected to correspond
to the experimental ligand binding behavior. Figure
7, A
C, shows the
predicted binding behavior for a series of oligomers of total valency 1 to 8, using values for KD (1.4 µM)
and KX (0.2-20 × 10
4 cell
1) similar to
those observed experimentally (and identical to those of Fig. 2). For
the lowest KX value (2 × 10
5 cell
1), the curves
are closely spaced and similarly shaped, with slightly more shallow
slope and closer spacing for the oligomers with increased valency (Fig.
7 A). At saturating concentration, distribution plots
indicate that each oligomer is bound predominately monovalently (not
shown). With a ten-fold increase in
KX, striking differences in shape are
observed, with a strong asymmetry and greater spacing at lower oligomer
concentrations as compared to the behavior at lower
KX (Fig. 7 B). At high
concentration, the multivalent curves cross below the curve for
monomeric binding. A high-valency oligomer will compete very
effectively for binding sites relative to a monomeric ligand, and will
occupy a given number of receptors using a smaller total number of
bound oligomers (Lbound) as compared to a monomer. With another ten-fold increase in
KX (Fig. 7 C), this
behavior is even more pronounced. Higher valency leads to a rapid rise
in the number of oligomers bound at lower concentration, as seen by the
wide spacing of the curves at low concentration. At higher
concentration, the strength of the multivalent binding is a significant
impediment to binding of additional oligomers, and increasing oligomer
size results in fewer total oligomers bound as compared to smaller
oligomers. Thus, the predicted binding behavior is very sensitive to
the parameter KX. Changes in the parameter KD do not affect the shape
of the curves, but simply shift them to different concentrations, with
lower KD resulting in a linear shift
to lower concentrations (not shown). This is the same behavior as
observed for the binding distribution plots (Fig. 2). As before,
changes in Rtot resulted in changes
identical to the corresponding change in
KX, but with changes in the saturation value.

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FIGURE 7
Simulation of binding and competition.
(A-C) Direct binding of multivalent
ligands to a cell surface in terms of number of oligomers bound,
Lbound. Each curve shows the behavior of a
given valency of oligomer binding to the cell.
KX increases as shown from panels
(A) to (C).
(D-F) Competition of a labeled tetramer
(35 nM) by different valency unlabeled oligomers of the same ligand.
KX increases as shown from
(D) to (F).
Rtot = 24,000 per cell in all panels
|
|
Experimental oligomer binding data were described well by the model.
Binding of the MHC oligomers can be measured concurrently with T-cell
activation markers using fluorescent labels incorporated into the
oligomer cross-linking reagents and multicolor flow cytometry (Cochran
and Stern, 2000
), although internalization of bound oligomer occurs
during the extended incubations used for the activation assays (Cameron
et al., 2001
). The MHC oligomer series used earlier in the activation
experiments was tested for direct binding to the HA1.7 clone (Fig.
8). The experimental binding curves
exhibit some of the characteristics of the predicted binding curves,
including variable spacing depending on ligand concentration and
convergence at high concentration (Fig. 8). These data were fit to the
modeled total number of oligomers predicted to bind per cell at
equilibrium (Lbound). The best fit to
this data (Fig. 8) gives a KD of
1.6 ± 0.3 µM and a KX of
0.950 ± 0.001 × 10
4 per
cell
1 (Table 1). These values are similar to
the KD and
KX values obtained independently from
the T-cell activation data (Table 1). The scale factor from the direct
binding fit was 0.806 ± 0.002, which is somewhat below unity
perhaps because of partial quenching of the fluorescein labels in
acidic compartments after endocytosis (Cameron et al., 2001
).

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FIGURE 8
Direct binding data and fit. These curves show the
experimental results for direct binding of labeled monomer ( ), dimer
( ), trimer ( ), and tetramer ( ) (Cochran et al., 2000 ), and the
model fit to these data (lines). Parameters shown in
Table 1.
|
|
The model can be used also to simulate competition experiments,
in which a constant concentration of labeled "probe" oligomer is
incubated in the presence of a variable concentration of unlabeled "competitor" oligomer or monomer. Figure 7,
D-F, shows a series of predicted competition
curves for oligomers of various valency, in each case using a constant
concentration of probe tetramer (35 nM). These conditions are similar
to those that have been used to evaluate relative oligomer binding
(Cochran et al., 2000
; Reichstetter et al., 2000
). As before, three
different values of KX in the range of
the experimental values are shown in Fig. 7,
D-F, with each panel varying by a factor of ten
from the adjacent panel. In contrast to the predicted binding curves,
the shape of the competition curves are quite similar for oligomers of
different valency, with only a small decrease in curve spacing with
increasing valency. Moreover, changes in
KX result only in small shifts on the
concentration axis rather than substantial changes in curve shape or
spacing. A similar effect can be seen for changes of KD. Thus, although the predicted
curves fit well to experimental data (not shown), independent
information about binding and cross-linking parameters cannot be
extracted from this type of competition binding experiment.
 |
DISCUSSION |
We have applied a simple two-parameter binding model to the
activation of antigen-specific T cells by oligomeric class II MHC
proteins. We find that the model accurately describes important features of the T-cell responses to soluble MHC oligomers, including the bell-shaped, nonsaturating concentration dependence and the variation of response maxima with oligomer size. Similar dissociation constants (KD) and cross-linking
constants (KX) were extracted from
different assays, including direct oligomer binding data and
measurement of the T-cell activation markers CD3 downregulation, CD69
upregulation, and CD25 upregulation, indicating that these parameters
reflect intrinsic properties of the system. The strong correlation
observed throughout the dose response between the levels of cellular
activation and the predicted number of multivalently bound receptors
suggests that these activation markers simply report the number of
suitably engaged receptors. Elaborate multi-step cytoplasmic signaling
pathways have been elucidated for T cell signaling pathways that lead
to upregulation of gene expression, including receptor phosphorylation,
assembly of multi-component signaling complexes on receptor cytoplasmic
domains, activation of various tyrosine and serine/threonine kinase
cascades, changes in intracellular Ca2+
concentration, and activation and nuclear translocation of
transcription factors (Cantrell, 1996
). The CD3 downregulation
(receptor internalization) pathway is less completely understood, but
appears to involve many of the same early processes (Itoh and Germain,
1997
). Despite the apparent complexity of these signaling cascades,
they do not appear to substantially modify the original binding signal,
and the final cellular readout essentially reports the number of
multivalently engaged receptors. For one marker (CD25), the
relationship between binding and response was best described by a
quadratic rather than linear relationship. Other activation responses
may show other dependences and may incorporate information from other
signaling pathways. Nonetheless, the simple correspondence between the
number of engaged receptors and the degree of cellular activation
observed many hours after stimulation is striking.
Implicit in the model is the notion that multivalent engagement of
receptors leads to signaling, but that monovalent engagement does not.
Although this is supported by recent experimental work, particularly in
CD4+ T cells (Boniface et al., 1998
; Cochran et
al., 2000
), the biochemical basis of signal initiation is not yet
clear. Receptor clustering is known to lead to phosphorylation of
receptor cytoplasmic domains, but, currently, it is not clear how
clustering results in kinase activation or in exposure of cytoplasmic
domains, although several models have been proposed (Aivazian and
Stern, 2000
; Chan et al., 1994
; Shaw and Dustin, 1997
). The modeling
performed here cannot definitively distinguish between a generic
clustering mechanism where Rmulti is
the parameter that scales with T-cell activation, or a specific
dimerization mechanism where Rdimer
describes the triggering.
An individual's T-cell repertoire includes many different T-cell
clones of varying MHC-TCR affinity and signaling capacity (Janeway et
al, 2001
). Moreover, a T cell in different developmental and activation
states has different sensitivities to antigenic stimulation. Parameters
derived from least-squares fitting of the model to experimental
activation data can be used to understand and predict these functional
differences among T cells. We applied the model to several different
T-cell clones and to a polyclonal cell line representative of a
subpopulation present in blood. The KD
and KX parameters extracted from
activation data differed for the different T cells, with the
differences consistent with behavior observed in cellular assays. For
example, the HACoH8 clone has a KX
value 13-fold higher than for HA1.7, indicating an increased tendency
to form receptor cross-links. This clone can be stained by class II MHC
oligomers even at 4°C, whereas most clones, including HA1.7 and Cl-1,
require incubation at increased temperature to stain with those
reagents (Cameron et al., 2001
). The temperature dependence has been
attributed to membrane or cytoskeletal rearrangements that are
necessary for monomeric TCR to co-localize sufficiently to allow
multivalent binding of MHC oligomers, and which are inhibited at low
temperature (Cameron et al., 2001
). The increased cross-linking
tendency of HACoH8 would increase its ability to multivalently engage
MHC oligomers, allowing oligomer staining under conditions where other
clones are not stained.
With the increasing use of MHC tetramers in detection and analysis of
specific T cells in clinical samples (McMichael and O'Callaghan,
1998
), it is important to understand the parameters that govern the
multivalent MHC-TCR interaction. Our analysis suggests that this
relationship can be complex, with substantial nonlinear contributions
from the receptor number (Rtot) and
cross-linking propensity (KX). In an
early description of the use class II MHC oligomers, a linear
correlation was observed between oligomer staining intensity and
binding affinity KD, for several
T-cell hybridomas after correction for the total receptor number
(Crawford et al., 1998
). Our analysis suggests that this relationship
will only hold for a restricted range of
Rtot, and only for cells with similar
KX values. Finally, it is important to
note that IC50 values determined from competition
analysis cannot be related to MHC-TCR
KD values unless the relevant
KX values are known.
The sensitivity of the model to changes in
KX suggests a novel mechanism by which
T cells could regulate their activation state. A naïve T cell,
which has never previously seen antigen, is much more difficult to
activate than the corresponding memory T cell, which is the long-lived
product of a prior encounter to antigen (Janeway et al., 2001
). Certain
treatments with high antigen dose or with partial antigenic stimuli are
known to "anergize" T cells, i.e., to drive them to nonantigen
responsive state (Schwartz, 1997
). In both cases, the responsive and
nonresponsive T cells express the same receptor, and so have the same
MHC-TCR affinity. It has generally been thought that these changes in
activation sensitivity are due to changes in the intracellular
signaling pathways. However, it is possible that T cells could regulate their activity by changing their ability to cluster TCR in the plane of
the membrane, without any change in cytoplasmic signaling processes. In
our model, this would correspond to a change in KX. Such changes could be effected by
alteration of receptor-cytoskeletal interactions (Viola et al., 1999
),
by receptor localization to membrane raft microdomains (Xavier and
Seed, 1999
), or by alteration of the receptor oligomeric state
(Fernandez-Miguel et al., 1999
). Recently, differences in the binding
avidity of naïve as compared to activated T cells have been
observed, and attributed to differences in TCR oligomeric state (Fahmy
et al., 2001
); these could as well be due to differences in the dynamic
cross-linking propensity rather than the static oligomeric state. The
pronounced effects on ligand sensitivity that we have observed for
relatively small changes in KX (Figs.
2 and 5) suggest that substantial changes in activation potential can
be realized without any change in the intracellular signaling pathways.
In principle, this possible mechanism is similar to one hypothesized to
regulate cellular sensitivity to soluble monomeric antigen through
changes in receptor organization (Bray et al., 1998
).
There are some shortcomings of this approach in modeling the activation
of T cells. We assume that all cross-linking events are equivalent, but
it is possible that sequential cross-linking interactions are governed
by different KX values. The model
assumes a constant receptor number
Rtot, although activated receptors become downregulated as part of the activation response (Liu et al.,
2000
), thus altering Rtot during the
course of the experiment. We used the initial
Rtot in calculating
KX values, because the T-cell response
to soluble MHC oligomers is rapid (Boniface et al., 1998
, and J. R. Cochran and L. J. Stern, unpublished results). Using
the initial Rtot, similar
KX values were obtained at different times in the response with only a change in scale factor. However, for
derivation of an actual thermodynamic association constant, a more
sophisticated analysis might be warranted. Finally, because this is an
equilibrium model, it does not account for kinetic features of the
interaction that may play a role in triggering; for example, the
off-rate of the MHC-TCR complex has been proposed to be more important
in regulating activation behavior than the affinity (Matsui et al.,
1994
).
Despite the simplifications made by the model, it correctly predicts
T-cell binding and activation behavior within observed experimental
error. This model should prove useful in guiding experimental detection
of T cells using MHC oligomers, and it provides a quantifiable measure
of cellular parameters that appear to regulate antigen sensitivity in T cells.
We thank Corinne Moulon for the HACoH8 clone, A. Sette for Cl-1, J. Lamb for HA1.7, and Bader Yassine-Diab and Tom Cameron for providing
the HA03 polyclonal line.
This work was supported by National Institutes of Health grant
NO1-AI48833 (L.J.S.) and a National Institutes of Health Biotechnology Training grant NIH-T32-GM08334 (J.D.S., J.R.C.).
Address reprint requests to Lawrence J. Stern, Dept. of Chemistry,
Massachusetts Institute of Technology, 77 Massachusetts Ave.,
Cambridge, MA 02139. Tel.: 617-253-2849; Fax: 617-258-7847; E-mail:
stern{at}mit.edu.