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Biophys J, March 2002, p. 1396-1404, Vol. 82, No. 3
and
*Department of Chemistry, Wabash College, Crawfordsville Indiana
47933 USA; and
Laboratory of Membrane Biochemistry and
Biophysics, NIAAA, National Institutes of Health, Rockville, Maryland
20852 USA
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ABSTRACT |
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Measurement of nuclear Overhauser enhancement spectroscopy cross-relaxation rates between ethanol and palmitoyloleoylphosphatidylcholine bilayers was combined with atomic-level molecular dynamics simulations. The molecular dynamics trajectories yielded autocorrelation functions of proton dipole-dipole interactions, and, consequently, relaxation times and cross-relaxation rates. These analyses allow the measured cross-relaxation rates to be interpreted in terms of relative interaction strengths with the various segments of the lipid molecule. We determined that cross-relaxation between ethanol and specific lipid resonances is primarily determined by the sites of interaction with some modulation due to lipid disorder and to local differences in intramolecular lipid dynamics. The rates scale linearly with the lifetime of temporary ethanol-lipid associations. Ethanol interacts with palmitoyloleoylphosphatidylcholine bilayers primarily via hydrophilic interactions, in particular the formation of hydrogen bonds to the lipid phosphate group. There is a weak contribution to binding from hydrophobic interaction with lipid chain segments near the glycerol. However, the strength of hydrophobic interactions is insufficient to compensate for the energetic loss of locating ethanol in an exclusively hydrophobic environment, resulting in a probability of locating ethanol in the bilayer center that is three orders of magnitude lower than locating ethanol at the lipid/water interface. The low cross-relaxation rates between terminal methyl protons of hydrocarbon chains and ethanol are as much the result of infrequent chain upturns as of brief excursions of ethanol into the region of lipid hydrocarbon chains near the glycerol. The combination of nuclear magnetic resonance measurements and molecular dynamics simulations offers a general pathway to study the interaction of small molecules with the lipid matrix at atomic resolution.
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INTRODUCTION |
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The binding of ethanol molecules to the lipid
matrix of biomembranes is an important, and still not well understood,
event in anesthesia. For example, Mitchell and Litman (2000)
recently reported that under physiologically relevant conditions, ~90% of the
effect of ethanol on the G-protein coupled membrane receptor rhodopsin
appears to be the result of changes in the acyl chain packing of the
lipid matrix. In contrast, other work has emphasized the direct
interaction of ethanol with membrane proteins (Mihic et al., 1997
).
Perhaps ethanol acts at multiple sites with variable emphasis on
indirect interaction via the lipid matrix or direct interaction with
the protein, depending on the specific protein system involved.
Ultimately, approaches that resolve ethanol interaction with the
constituents of biomembranes at atomic resolution are required to
provide answers about the location of ethanol, the degree of
immobilization of bound ethanol molecules, and the functional perturbation that ethanol causes in the lipid matrix and in proteins.
We have shown previously (Holte and Gawrisch, 1997
) that the location
of ethanol in the lipid matrix of biomembranes can be studied by
two-dimensional magic angle spinning (MAS) nuclear Overhauser
enhancement spectroscopy (NOESY). This method is sensitive to
interactions on the angstrom length scale and to motions on the pico-
to microsecond time scale, thus providing data with extremely high
temporal and spatial resolution. Since our first paper appeared, the
processes of spectral acquisition and data analysis have been greatly
refined (Huster and Gawrisch, 1999
; Huster et al., 1999
; Yau and
Gawrisch, 2000
), and the possibility of comparison with molecular
dynamics computer simulations has developed (Feller et al., 1999
).
Recently, our laboratories have collaborated to use NOESY
cross-relaxation rates in phospholipid bilayers as a tool for the validation of molecular dynamics (MD) simulations and to use simulation trajectories to understand the factors influencing these rates (Feller
et al., 1999
). In this paper we extend these methods to the important
problem of solute partitioning into bilayer membranes. Details of the
experimental and simulation methodologies are presented, followed by
experimental and computational results that provide a picture of
ethanol-membrane interactions in unprecedented detail. We conclude with
a summary of the biological implications of these results and a
discussion of possible extensions of these methods to other systems of
biochemical interest.
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MATERIALS AND METHODS |
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Sample preparation
The phospholipids
1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine (POPC),
1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine-d4 (POPC-d4), and
1-palmitoyl-d31-2-oleoyl-sn-glycero-3-phosphocholine (POPC-d31) were obtained from Avanti Polar Lipids
(Alabaster, AL). Lipids were received as a powder and dried to a
monohydrate in the presence of phosphorous pentoxide under a vacuum of
50 µm Hg for 24 h. Multilamellar vesicles were prepared by
adding a mixture of ethanol in D2O to ~50 mg of
the dry lipid. The appropriate amount of ethanol solution was added to
establish a molar ratio of lipid/ethanol/water of 1:1:10. The samples
were sealed and subjected to centrifugation and temperature cycling
between
20 and 50°C over 6 h to achieve homogeneity. Ten
milligrams of sample were then transferred to an MAS insert and sealed
inside a 4-mm rotor for magic angle spinning.
Nuclear magnetic resonance measurements
2H Nuclear magnetic resonance (NMR) powder
spectra were acquired on a Bruker DMX300 spectrometer at a resonance
frequency of 46.1 MHz using a stationary dual resonance probe with a
4-mm solenoidal sample coil. Temperature was maintained at 10°C. A
quadrupolar echo sequence (Davis et al., 1976
) was used with two
1.8-µs 90° pulses and an interpulse delay of 50 µs. For the lipid
resonances, 4096 scans with at a spectral width of 200 kHz and a delay
time of 0.5 s were acquired. Deuterated ethanol and water required fewer scans. 2H NMR powder pattern spectra were
dePaked (Sternin et al., 1983
; McCabe and Wassall, 1995
) to give
spectra that correspond to the 0° orientation of the bilayer normal
with respect to the external magnetic field. Smoothed order parameter
profiles of the palmitic chain of POPC were calculated according to
Lafleur et al. (1989)
and Holte et al. (1995)
.
NOESY NMR experiments with magic angle spinning were conducted on a
Bruker DMX500 widebore spectrometer at a resonance frequency of 500.13 MHz. Sample spinning at 10 kHz was accomplished in a Bruker double gas
bearing MAS probehead for 4-mm rotors. Compressed air was passed
through a copper coil immersed in a cooling bath to maintain sample
temperature at 10 ± 1°C. Temperature inside the spinning rotor
was calibrated by recording the proton spectra of
1-stearoyl-2-oleoyl-sn-glyero-3-phosphocholine as a function of temperature to detect the gel-to-liquid crystalline phase transition at 6.6°C (Boggs and Tummler, 1993
). Two-dimensional NOESY was carried
out in the phase-sensitive mode. The pulse sequence (90°
t1
90°
m
90°
acquire
[t2])n was
used with 512 t1 increments, mixing
times,
m, from 5 to 800 ms, 2048 t2, increments, and 16 scans per
t1-increment. A 3.7-µs 90° pulse
and 3.3-kHz spectral width were used. The magnetic field strength was
locked to the internal D2O resonance of the
sample, using the third channel of the MAS probe.
Intensity of diagonal- and cross-peaks was recorded as a function of
mixing time and data were analyzed with XWIN-NMR software (Bruker
Instruments, Billerica, MA). To more accurately measure volumes of
cross-peaks between lipid and ethanol resonances, we performed signal
deconvolution of the two-dimensional NOESY spectra using the curve
fitting routine in SigmaPlot 5 (SPSS Inc., Chicago, IL). The resonances
are reasonably well approximated by Gaussian peaks with peak position,
peak width in x- and y-dimensions, and peak
height as fitting parameters. Precision of the deconvolution procedure
depends mostly on experimental artifacts, such as residual t1-noise and deviation of line shapes
from a Gaussian form, but also on the ratio of superimposed peak
intensities. Typical experimental errors of fitted peak volumes are 10 to 20%. Cross-relaxation rates were calculated by a matrix algorithm
that corrects for mild to moderate influences from spin diffusion and
spin-lattice relaxation (Huster et al., 1999
). No significant
contributions from spin diffusion were detected for mixing times up to
400 ms.
Molecular dynamics simulations
The simulation protocol has been successfully applied to the
simulation of numerous saturated and unsaturated phosphatidylcholine bilayers in the recent past (Feller et al., 1997a
, 1999
; Armen et al.,
1998
; Schneider and Feller, 2001
) and is described here for
completeness. The periodic simulation cell contained 72 lipids (36 per
monolayer), 72 ethanol, and 720 water molecules, corresponding to the
mole ratios of samples prepared for NMR investigations (see above). A
partially flexible simulation cell was used with the z
dimension (i.e., the bilayer normal) adjusted to maintain the
Pzz = 1 atm, and the x and
y dimensions fixed to maintain a surface area of 65 Å2/molecule, as estimated from x-ray diffraction
experiments on similar lipids (Koenig et al., 1997
) after considering
corrections from changes in sn-1 chain order due to
differences in the level of hydration and the presence of ethanol.
Initial coordinates for the POPC molecules were taken from a previously
published POPC simulation (Armen et al., 1998
).
The program CHARMM (chemistry at Harvard molecular mechanics)
(Brooks et al., 1983
) was used with the PARM22b4b all-atom
parameter set (Schlenkrich et al., 1996
; Feller and MacKerell, 2000
)
and its extension to unsaturated lipids (Feller et al., 1997b
). The CHARMM potential contains internal energy terms for bond lengths, bond
angles, torsional angles, and improper torsional angles. The
interactions between nonbonded atoms are described by Coulombic interactions between partial point charges on the atomic centers and a
Lennard-Jones 6-to-12 potential. The Lennard-Jones potential was
switched smoothly to zero over the region from 10 to 12 Å. Electrostatic interactions were included via the particle mesh Ewald
summation (Essmann and Berkowitz, 1999
). All bonds involving hydrogen
were fixed at their equilibrium distances using the SHAKE algorithm
(Ryckaert et al., 1977
). A time step of 2 fs was used with a
modified leap-frog Verlet integration scheme. A neighbor list, used for
calculating the Lennard-Jones potential and the real space portion of
the Ewald sum, was kept to 14 Å and updated every 20 fs. A variant of
the extended system formalism, the Langevin Piston algorithm (Feller et
al., 1995
), was used to control the normal pressure. The temperature
was maintained at 10°C by means of the Hoover thermostat (Hoover,
1985
). Coordinates sets were saved every 1 ps for subsequent analysis.
Simulations were carried out using four or eight processors on a
Beowulf-type parallel computer with each nanosecond of simulation
taking ~5 days of wall time. The total simulation length was 11 ns.
For data analysis, the first nanosecond of motions was discarded as
equilibration time.
Calculation of NOESY cross-relaxation rates
The NOESY experiment probes the transfer of magnetization,
occurring over a time interval referred to as the mixing time, from a
set of magnetically equivalent protons (producing resonance i) to a second set (producing resonance j). The
calculation of NOESY cross-relaxation rates from protein models and
simulations has been described in the literature (Brüschweiler
and Wright, 1994
; Brüschweiler et al., 1992
) and is briefly
reviewed here. The connection between the experimental NOESY
cross-relaxation rates and the molecular dynamics simulations is
established through the magnetic dipolar interaction correlation
function
|
(1) |
]1/2(3
cos2
1), and
is the angle between
the internuclear vector,
ij, and the z
axis (normal to the membrane). The summations over i and
j include all magnetically equivalent protons of each
resonance. From the MD simulation, the correlation function defined by
Eq. 1 is calculated directly from the trajectory. It should be noted
that the number of individual pair correlation functions is large,
however, only those pairs with small internuclear separations
contribute to the summation. Therefore, the finite size of the
simulation cell does not affect the results. The cross-relaxation rates
are calculated from the spectral density functions
Jij(
), which are the Fourier
transform of the correlation functions. Cross-relaxation rates depend
on Jij(2
0)
and Jij(0) according to
|
(2) |
0 is the proton Larmor
frequency, and
= (2
/5)
4
2(µ0/4
)2,
in which
is the gyromagnetic ratio for protons. The correlation function defined by Eq. 1 was calculated from the methylene protons of
each ethanol to each of the unique 1H
lipid resonances observed experimentally. The raw correlation functions
were fit to a sum of four exponentials as described previously
(Feller et al., 1999

1/ti,
allowing the Fourier transform to be performed analytically and the
contribution from each exponential to the overall cross-relaxation rate
to be quantified.
When interpreting the
ij it is important to
emphasize that these cross-relaxation rates are determined both by
structural considerations (the probability of close contact between
protons) and dynamic factors (the relaxation of the proton-proton
internuclear vector). The MD simulation results, by providing a direct
picture of the underlying correlation function,
Cij(t), can be used to quantify these contributions. The probability of close contact is
measured by the magnitude of
Cij(0), which is
proportional to
1/r
and thus
extremely sensitive to the number of very close contacts. In terms of
the fit parameters, this quantity is given by the sum of the intensity
factors, ai, and will be denoted
as. The dependence of
ij on relaxation time is seen most easily by
considering a simple single exponential decay of the correlation
function:
|
(3) |
0) and
Jij(0) to
ij
(see Eq. 2), correlation times,
, longer than ~400 ps
lead to negative cross-relaxation rates for a proton Larmor frequency
of 500 MHz.
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RESULTS AND DISCUSSION |
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Characterization of the state of POPC, ethanol, and water by 2H NMR
As visible from the deuterium spectra and chain order parameter
profiles (Figs. 1 and
2), POPC is in the lamellar state. The effects of dehydration and ethanol addition on chain order have opposite sign and similar magnitude. Dehydration from excess water to
10 waters per lipid increased chain order parameters, whereas addition
of one ethanol per lipid lowered them (Fig. 2). Both ethanol and water
interact with the lipid, leading to anisotropic solvent motions and
quadrupolar interactions of the 2H nuclei with
the electric field gradients within these molecules that only partially
average out. The order parameters of the ethanol C---D2 bonds, ethanol
C---D3 bonds, and water O---D bonds, are 0.064, 0.004, and 0.005, respectively. Such values are characteristic for
temporary association of solvent molecules with the lipid/water interface (Barry and Gawrisch, 1994
; Gawrisch et al., 1992
). The MD
simulation gave similarly low values for the order parameters of 0.039, 0.010, and 0.008 with standard deviations of ~0.020.
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1H MAS NOESY NMR
The resolution of resonance lines allows detection of 13 proton
signals, 10 from POPC, two from ethanol, and one from water (Fig.
3). Improvements in the design of MAS
rotor inserts and MAS probeheads resulted in two-dimensional NOESY
spectra (Fig. 4) with lower
t1-noise compared with our previous
investigation (Holte and Gawrisch, 1997
). Resonance signals of ethanol
are partially superimposed on lipid resonances. To reduce the influence
from signal superposition on cross-peak intensities, we also studied POPC-d4 with two deuterated methylene groups in the choline
headgroup, and POPC-d31 with a perdeuterated sn-1
palmitic acid chain. The chain-deuterated lipid only reduced signal
superposition, whereas the headgroup deuterated POPC allowed
unperturbed observation of ethanol-CH2
cross-relaxation with lipid resonances. Intensities of partially
superimposed cross-peaks were determined by deconvolution as described
under Materials and Methods.
|
|
Fig. 5 gives the per-proton cross-relaxation rates between ethanol and lipid resonances. Measured cross-relaxation rates are highest for interaction of ethanol with interface lipid protons, particularly with those in the glycerol region. There is an intriguing difference in cross-relaxation rates between ethanol-methyl and ethanol-methylene groups. Whereas methyl groups have stronger cross-relaxation with chain signals, methylene groups interact more strongly with headgroup resonances, suggesting that the ethanol molecule is oriented with its methyl group toward the hydrophobic bilayer core. Additional evidence for this orientation comes from the MD simulation. We found that the orientation of ethanol is such that the average distance of the methyl group to the bilayer center is 0.65 Å less than the distance to the hydroxyl oxygen.
|
Cross-relaxation rates from MD simulations
Fig. 6 shows examples of correlation
functions calculated from the MD trajectory. Correlation functions were
fit to a sum of four superimposed exponentials as described in
Materials and Methods. Fit parameters are reported in Table
1. Based on previous analysis of the
time scales of lipid dynamics (Pastor and Feller, 1996
), the four
relaxation rates can be attributed to various motions in the lipid
matrix. Librational motions of ethanol and lipid chemical bonds cause
the very fast initial decay of correlation functions with correlation
times of a few picoseconds. The decay with correlation times in the
range of 100 ps is the result of gauche-trans isomerization,
correlation times from 500 to 1000 ps are caused by molecular rotation
and wobble, and finally, correlation times in the multinanosecond range
are related to the diffusive motions of the smaller ethanol molecules
within the lipid matrix.
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Table 1 also provides the experimental and simulation results for the cross-relaxation rates between ethanol methylene protons and each resolved peak in the POPC spectrum. Both experiment and simulation give the same trend of rates of magnetization transfer between ethanol and lipid hydrocarbon-, glycerol-, and headgroup resonances (compare Fig. 5 and 7), i.e., the strongest magnetization transfer occurs to lipid resonances at or near the lipid/water interface, including upper segments of lipid hydrocarbon chains, glycerol, and lipid headgroups. Cross-relaxation rates decrease both going into the choline segments and moving further down the lipid chains to the center of the hydrophobic core. Considering the high sensitivity of cross-relaxation rates to experimental conditions such as temperature and water content, comparison of measured and calculated rates resulted in very good agreement.
|
Dynamic factors influencing the magnitude of NOESY cross-relaxation rates
We have calculated the contributions to the cross-relaxation rates
from the spectral density functions
Jij(0) and
Jij(2
0). Results are summarized in Fig. 7. The spectral contributions
Jij(0) from motions with the
correlation time,
4, and the amplitude, a4, (diffusive motions of ethanol
molecules within the lipid/water interface) are dominating the
cross-relaxation rates with their large negative values. The fast
motions with correlation times of less than 400 ps contribute to
Jij(2
0) and
result in a small positive correction to the overall negative
cross-relaxation rates. At 10°C the correction is of the order of 5 to 20% (the bars in Fig. 7 represent the total cross-relaxation rates
ij, the solid line is the
Jij(0)-contribution only).
Nonetheless, the ethanol/lipid cross-relaxation rates are such that
they are sensitive to the competing contributions of
Jij(0) and
Jif(2
0). Not
only does Jij(0) decline with
increasing temperature because
4 becomes smaller, but the contribution from
Jif(2
0) (with
opposite sign) simultaneously increases. We propose that this explains
the tremendous sensitivity of measured cross-relaxation rates to
temperature and water content of samples.
Fig. 7 also shows the importance of taking into account differences in
relaxation rates between the correlation functions for each lipid
segment. The scaled intensity of the correlation function at time 0, C(0) (dashed line in Fig. 7), poorly predicts differences
between cross-relaxation rates, demonstrating that dynamic factors play
an important role in the relative cross-relaxation rates. Differences
in the longest correlation time,
4, have the most significant influence on these rates. This correlation time represents an effective lifetime of temporary associations between lipid and ethanol. The lifetime of these associations with functional groups at the hydrophobic/hydrophillic interface is increased compared
with those that occur in the aqueous layer (Table 1).
Location of ethanol molecules in the lipid bilayer
The significant difference in ethanol-lipid cross-relaxation rates (Fig. 5), and in the magnitude of the choline and glycerol correlation functions (Fig. 6), suggests that the density of ethanol in the vicinity of the glyercol segment is higher than near the choline. To address the relationship between local ethanol density and NOESY cross-relaxation rates, the concentration of ethanol through the lipid bilayer, derived from the MD simulation, has been plotted in Fig. 8. Ethanol prefers the aqueous phase and the lipid water interface but can also penetrate into the lipid bilayer to the region of upper chain segments. Notice that the location of highest ethanol density is between the carbonyl and phosphate groups, i.e., coincident with the glycerol segment that is found, from both experiment and simulation, to have the highest rates of cross-relaxation. Due to its partial hydrophobicity, penetration into the hydrophobic regions of the bilayer is significantly deeper compared with water. The relatively low energetic cost of ethanol penetration into the interface region is quantified by the potential of mean force calculations presented in Fig. 9. Ethanol-free energy near the lipid phosphate groups is the same as in water but increases exponentially with decreasing distance from the bilayer center. Locating ethanol or water in the center of the hydrophobic core (z = 0) is energetically very unfavorable with the probability of finding an ethanol molecule in the bilayer center ~1000 times lower than finding ethanol in the water phase.
|
|
In Figs. 5, 6, and 8, we have demonstrated that the highest NOESY
cross-relaxation rates correspond to those segments of the lipid
molecule that reside in the region of highest ethanol density. The
origin of this high ethanol density near z = 17.5 Å is the strong
interaction between ethanol and the lipid phosphate and carbonyl
groups. This is shown clearly in Fig.
10 where the lipid-ethanol interaction
energies from the MD simulation have been decomposed into contributions
from submolecular fragments of the lipid molecule. The strongest
ethanol interactions are observed with the phosphate and carbonyl
groups, thus placing the ethanol methyl and methylene protons in close
proximity to lipid protons of the glycerol and upper chain segments of
the molecule and causing the high rates of cross-relaxation. A typical
lipid/ethanol conformation is displayed in Fig.
11, showing a hydrogen bond between the
polar ethanol hydrogen and a phosphate oxygen. The strong interactions
between ethanol and lipid groups further modulate the observed
cross-relaxation rates by increasing the lifetime of ethanol-lipid
contacts. This is seen in Table 1 where the correlation functions for
the glycerol segments have the longest mean relaxation times of any
segments. Additionally, the dipolar correlation function depends not on rij, i.e., the simple distance between
protons, but is instead a function of r
|
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It should be emphasized that, due to the inherent disorder of lipids within the bilayer, ethanol-lipid contacts do not necessarily occur at the average location of the lipid segments. For example, there is a small but measurable cross-relaxation between the ethanol methyl group and the terminal methyl group of hydrocarbon chains. According to Fig. 8, the probability of ethanol penetration into the membranes hydrophobic core is extremely low. This raises the question of where ethanol and hydrocarbon chain methyl groups meet. We divided the simulated membrane into slabs of 5 Å thickness and estimated the spatial origin of magnetization transfer between these methyl protons (Fig. 12). The black bars represent the distribution of chain methyl groups, whereas the gray bars are the distribution of contacts between chain and ethanol methyl groups, defined as approach to a distance of 6 Å or less. Probability of contact between ethanol and lipid methyl groups is highest in the hydrocarbon chain region near the lipid/water interface and in the interface region. Therefore the contacts between methyl groups of ethanol and lipid hydrocarbon chains are both a reflection of lipid hydrocarbon chain upturns and excursions of ethanol molecules into the upper hydrophobic chain region of membranes.
|
Concluding remarks
The quantitative analysis of two-dimensional NOESY spectra from lipid membranes has greatly increased the number of NMR parameters of membranes. For example, the total number of order- and relaxation parameters that were measured for the ethanol-POPC samples exceeds 100. In contrast to NOESY cross-relaxation rates in proteins, cross-relaxation in the lipid matrix does not report a fixed geometry of biomolecules, but reflects the distribution function of lipid- and solvent segments along the bilayer normal, the probability of short-lived associations, and the presence of motions within membranes covering correlation times in the range from pico- to microseconds. The good agreement between simulation and experiment serves to validate the model and computational protocol. Furthermore, the NMR parameters reflect intricate details on membrane structure, dynamics, and solvent interactions that can be interpreted quantitatively when the experiments are combined with MD simulations. Thus, the present study lays a foundation for further studies of membrane solute interactions via NOESY spectroscopy and MD simulation.
The combination of spectroscopic and simulation results unambiguously
places ethanol at the membrane/water interface, specifically in the
chemically heterogeneous region between the phosphate and carbonyl
groups. Ethanol interacts with the lipid matrix primarily via
hydrophilic interactions like hydrogen bonds and gains only modestly
from hydrophobic interactions with upper chain segments. Although an
interface location of ethanol was predicted previously on the basis of
Fourier transform infrared (Chiou et al., 1990
; Klemm, 1990
), NMR
(Holte and Gawrisch, 1997
; Barry and Gawrisch, 1994
, 1995
; Klemm and
Williams, 1996
), and fluorescence studies (Slater et al., 1993
), the
current experiments excel in temporal and spatial resolution of ethanol
membrane interaction. Ethanol molecules prefer the lipid/water
interface but can penetrate into the region of upper chain segments.
This location is primarily facilitated by hydrogen bonding between
ethanol and the lipid phosphate groups, but also by hydrogen bonding to
carbonyls and by weak hydrophobic van der Waals attraction between the
short ethyl group and upper chain segments. The hydrophobic
contributions to this interaction are unable to compete with the strong
desire of ethanol to form hydrogen bonds, thus preventing high
concentrations of ethanol within the hydrophobic core.
We speculate that interaction of ethanol with the interface region of proteins is governed by similar needs to satisfy hydrophilic interactions, aided by small gains from inserting the ethyl groups into a hydrophobic environment. We expect that ethanol interacts with the same functional groups on protein surfaces as in the lipid/water interface region. Interestingly, phosphorylation of proteins is a common mechanism to control activity. Perhaps, ethanol binding to phosphorylation sites of proteins is one of the mechanisms by which ethanol influences protein function.
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ACKNOWLEDGMENTS |
|---|
S. E. Feller and C. A. Brown were supported by grant MCB-0091508 from the National Science Foundation.
| |
FOOTNOTES |
|---|
.
Address reprint requests to Klaus Gawrisch, Laboratory of Membrane Biochemistry and Biophysics, NIAAA, National Institutes of Health, 12420 Parklawn Drive, Room 150, Rockville, MD 20852. Tel.: 301-594-3750; Fax: 301-594-0035; E-mail: gawrisch{at}helix.nih.gov.
Submitted June 29, 2001, and accepted for publication December 5, 2001.
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REFERENCES |
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Biophys J, March 2002, p. 1396-1404, Vol. 82, No. 3
© 2002 by the Biophysical Society 0006-3495/02/03/1396/09 $2.00
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A. Vogel, H. A. Scheidt, and D. Huster The Distribution of Lipid Attached Spin Probes in Bilayers: Application to Membrane Protein Topology Biophys. J., September 1, 2003; 85(3): 1691 - 1701. [Abstract] [Full Text] [PDF] |
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W. Zhang, E. Crocker, S. McLaughlin, and S. O. Smith Binding of Peptides with Basic and Aromatic Residues to Bilayer Membranes: PHENYLALANINE IN THE MYRISTOYLATED ALANINE-RICH C KINASE SUBSTRATE EFFECTOR DOMAIN PENETRATES INTO THE HYDROPHOBIC CORE OF THE BILAYER J. Biol. Chem., June 6, 2003; 278(24): 21459 - 21466. [Abstract] [Full Text] [PDF] |
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