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Biophys J, June 2002, p. 3214-3223, Vol. 82, No. 6
Laboratoire d'Immunologie, INSERM U 387, Hôpital Ste-Marguerite, BP 29, 13274 Marseille Cedex 09, France
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ABSTRACT |
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A laminar flow chamber was used to study single molecule
interactions between biotinylated surfaces and streptavidin-coated spheres subjected to a hydrodynamic drag lower than a piconewton. Spheres were tracked with 20 ms and 40 nm resolution. They displayed multiple arrests lasting between a few tens of milliseconds and several
minutes or more. Analysis of about 500,000 positions revealed that
streptavidin-biotin interaction was multiphasic: transient bound states
displayed a rupture frequency of 5.3 s
1 and a rate of
transition toward a more stable configuration of 1.3 s
1.
These parameters did not display any significant change when the force
exerted on bonds varied between 3.5 and 11 pN. However, the apparent
rate of streptavidin-biotin association exhibited about 10-fold
decrease when the wall shear rate was increased from 7 to 22 s
1, which supports the existence of an energy barrier
opposing the formation of the transient binding state. It is concluded
that a laminar flow chamber can yield new and useful information on the
formation of molecular bonds, and especially on the structure of the
external part of the energy landscape of ligand-receptor complexes.
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INTRODUCTION |
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A major property of biomolecules is to bind a
variety of ligands in order to fulfill a specific function such as
mediating cell adhesion, triggering receptor-mediated cell activation
or regulating intracellular networks. During the last decades, it became clear that simple parameters such as affinity or kinetic association and dissociation constants did not fully account for the
binding behavior of cell receptors (Bell, 1978
). Thus, the capture of
flowing leukocytes by activated endothelium probably requires molecular
associations endowed with especially high mechanical strength (Lawrence
and Springer, 1991
). The uptake of soluble ligands by surface-bound
molecules is probably dependent on molecular length and flexibility
(Pierres et al., 1998a
). The recognition by T lymphocytes of complexes
formed between major histocompatibility complex molecules and antigenic
peptides may be influenced by transient conformational changes of these
complexes (Anderson and McConnell, 1999
).
Recently, much new information was obtained on ligand-receptor
interaction by monitoring the rupture of single molecular bonds subjected to controlled disruptive forces generated by hydrodynamic flow (Tha et al., 1986
; Kaplanski et al., 1993
; Alon et al., 1995
), soft vesicles (Evans et al., 1991
, 1994
, 2001
; Merkel et al., 1999
),
atomic force microscopy (Florin et al., 1994
; Lee et al., 1994
;
Hinterdorfer et al., 1996
; Fritz et al., 1998
; Baumgartner et al.,
2000
), other microcantilever-based devices (Tees et al., 2001
), or
optical traps (Kuo and Sheetz, 1993
; Stout, 2001
).
The earlier papers reported experimental determination of bond
lifetime, measured on bonds subjected to supposedly constant disruptive
forces (Kaplanski et al., 1993
; Alon et al., 1995
), or unbinding force,
i.e., force exerted at the moment of rupture on bonds subjected to
increasing distractive stress. Most results could be accounted by a
simple formula suggested by George Bell (Bell, 1978
; Chen and Springer,
2001
):
|
(1) |
1) of a bond subjected
to a distractive force F,
kB is Boltzmann's constant and T the absolute temperature. Parameter x was
suggested to represent the interaction range, with a dimension of a length.
However, this simple framework rapidly appeared insufficient.
First, an experimental study of antigen/antibody interaction suggested
that ligand receptor association involved a transient intermediate step
with a lifetime of the order of a second (Pierres et al., 1995
), which
seemed a reasonable concept in view of previous reports (Beeson and
McConnell, 1994
). Second, it was rapidly found that experimental
unbinding forces determined on a given ligand-receptor couple were
highly dependent on the time dependence of applied distractive force.
Thus, the unbinding force of the avidin-biotin couple decreased from
160 pN (Florin et al., 1994
) to about 50 pN (Merkel et al., 1995
) when
the rate of force increase (i.e., loading rate) was decreased from more
than 10,000 pN/s (as used in atomic force microscopy studies) to about
100 pN/s. This point was clarified by Evans and colleagues (Evans and
Ritchie, 1997
; Evans, 1998
) who extended Bell's framework by
developing Kramers' theory (Kramers, 1940
) of the rate of escape of a
Brownian particle from a potential well in viscous medium. They
hypothesized that the separation of a ligand from a receptor under
force followed a unidimensional path, with an energy-distance curve,
determined by the so-called energy landscape, displaying sequential
maxima, or barriers. They showed that the plot of unbinding force
versus the logarithm of the loading rate was composed of sequential
straight segments the slope of which might be written as
kBT/xi,
where xi represented the distance
between the location of the energy minimum and the ith
barrier on the energy landscape (Evans, 1998
, 2001
). Further, by
varying the loading rate on an enormous range of 6 orders of magnitude
(from 1 to 106 pN/s), these authors were able to
detect two barriers on the avidin/biotin energy landscape, with
sequential positions at 0.12 nm and 0.5 nm from the energy minimum
(Merkel et al., 1999
).
In addition to the interest of these experimental approaches to
understand the biological function of receptors and ligands, these
studies provided an unique opportunity to enhance our understanding of
protein structure/function relationship. Indeed, it may be hoped that
experimental curves will be compared to results from molecular dynamic
simulations, when higher computer power or improved algorithms allow
sufficient increase of the timescale of simulated experiments
(Grubmüller et al., 1996
; Izrailev et al., 1997
; Evans, 2001
;
Isralewitz et al., 2001
). Further, it is now possible to analyze the
effects of well-defined molecular mutations (Yuan et al., 2000
) or
environmental changes (Evans et al., 2001
) on energy landscapes.
The aim of the present work was to show that the laminar flow
chamber operated at low shear rate can provide additional information on the fine properties of ligand-receptor association. We used the
streptavidin-biotin interaction as a suitable model in view of the
availability of accurate structural data (Weber et al., 1989
;
Hendrickson et al., 1989
; Sano and Cantor, 1995
) as well as previous
studies of single bond behavior (Merkel et al., 1995
, 1999
; Florin et
al., 1994
; Lee et al., 1994
; Grubmüller et al., 1996
; Izrailev et
al., 1997
). We studied the motion of streptavidin-coated microbeads
along biotin-derivatized surfaces under flow with low shear rate (7-22
s
1). These spheres exhibited arrests of widely
varying duration (from 20 ms to several tens of seconds as detected
with our monitoring apparatus). The estimated tension generated by the
hydrodynamic drag on a tether retaining a particle varied between
3.5 and 11 pN. The initial detachment rate at low binding site
concentration was estimated at 5.3 s
1 with a
transition frequency of 1.3 s
1 toward a more
stable binding state. When the shear rate was increased 3-fold, the
binding rate exhibited 10-fold decrease whereas the detachment rate did
not display any significant change, suggesting the existence of a
barrier slowing the access to the transient binding step. It is
concluded that 1) the transient binding states we detected may be of
functional significance; and 2) it was difficult with previously
described methods to analyze binding states of millisecond duration in
presence of a disruptive force lower than 10 pN, since a force higher
than 20 pN was required to achieve bond rupture within a period of time
compatible with laboratory experiments. Preliminary results were
presented in a previous communication (Pierres et al., 1998b
).
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MATERIALS AND METHODS |
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Molecule and surfaces
Streptavidin-coated beads of 2.8 µm diameter (Dynabeads M280)
were supplied by Dynal France (Compiègne). The surface density of
streptavidin groups on spheres was about 3460 molecules · µm
2. Biotinylated surfaces were prepared with
two different procedures.
Molecularly smooth surfaces were obtained by sequentially incubating
freshly cleaved mica surfaces (Muskovite mica, Metafix, Montdidier, France) with 1 mM NiCl2, then
biotinyl-(Gly)12-(His)6NH2 (custom-synthesized by Neosystem, Strasbourg, France and supplied as
trifluoroacetate). The surface density of biotin sites was estimated
with two complementary methods. The uptake of Alexa-Fluor 488-conjugated streptavidin(S-11223, Molecular Probes) was measured with confocal microscopy (Pierres et al., 1994
). This method allowed reproducible determination of biotin site density down to about 1000 molecules/µm2. Another method was used to assay
low site density in order to reduce the uncertainty due to nonspecific
streptavidin binding: mica surfaces were treated with
fluorescein-(Gly)12-(His)6NH2 (custom synthesized by Neosystem) and fluorescence was measured with
confocal microscopy. The peptide surface density was respectively estimated at 5950, 4450, 1730, 230, 130, and 40 molecules/µm2 when the peptide concentration
used for mica treatment was 1, 0.1, 10
2,
10
3, 10
4, and
10
5 mg/ml, respectively. The coefficient of
variation was less than 30% for all concentrations used.
A key point in our experiments was to ensure that bead detachment was
due to a rupture of biotin-streptavidin interaction rather than
separation of adsorbed biotinylated peptides from mica surfaces. Since
the strength of peptide adsorption on mica was not known, additional
experiments were performed with a coupling procedure that was expected
to provide higher mechanical resistance and was found convenient in
previous experiments (Pierres et al., 1996
). Briefly, glass coverslips
were washed with concentrated sulfuric acid, then rinsed overnight and
incubated for 60 min at room temperature with 0.1 mg/ml
poly-L-lysine (Sigma, no. P1524, mol wt 388,100). They were
then washed three times in pH 7.2 phosphate buffer solution (PBS), then
treated 15 min with 2.5% glutaraldehyde in PBS, washed again in
deionized water, then PBS, and incubated for 2 h at room
temperature in PBS containing various concentrations of
biotin-(Gly)12-(Lys)6-NH2
(provided by Neosystem) and 0.2% bovine serum albumin (fraction V,
Sigma, no. A7030). Unreacted aldehyde groups were blocked by incubating
coverslips overnight with 0.2 M glycine before binding assays.
Flow chamber
Chambers were assembled as previously described (Pierres et al.,
1998c
) by applying mica sheets against a custom-made Plexiglas block
with a cavity of 0.1 × 6 × 20 mm3
bearing a toric gasket (Satim, Evenos, France). The chamber was set on
the stage of an inverted microscope (IX, Olympus) bearing a
long-distance 40X dry objective (n.a. 0.55) and a CCD camera (SPT-M
108CE, Sony, Japan) connected to a videotimer (VTG33, Mussetta, Marseille) and a videotape recorder for delayed analysis. Typically, 2 ml of bead suspension (3,000,000/ml in PBS supplemented with 0.2%
bovine serum albumin) were driven through the chamber with a 5 ml
syringe mounted on a syringe holder (Razel, supplied by Bioblock,
Illkirch, France). In some cases, the specificity of binding events was
checked by blocking adhesion with 1 mM biotin (pure D
biotin, UP10685E, supplied by Interchim, no. 040).
Particle tracking
Videotapes were analyzed with a PCVision + digitizer (Imaging Technology, Bedford, MA, supplied by Imasys, Suresnes, France) mounted on a desk computer equipped with a 80486 processor. Pixel size was 0.23 µm. Custom-made software written in assembly language allowed separation of the interlaced fields forming each image, thus yielding 20-ms time resolution. On each field, the sphere center of gravity was determined with about 40 nm accuracy. Also, the area was calculated to detect artifactual events such as sphere collisions or doublet formation. In a typical experiment, about 100 particle trajectories were recorded, amounting to about 20,000 events, defined as sets of four parameters: x and y coordinates of the projection of the sphere center on the chamber floor, time, and particle area.
Data analysis
Shear rate determination
Due to the deformability of the chamber floor, standard equations from fluid mechanics do not allow accurate derivation of the wall shear rate G from the flow rate and chamber dimensions (Goldman et al., 1967
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(2) |
1.
Particle selection
Accurate determination of binding frequencies requires to consider only fully sedimented particles: indeed, when the shear rate is increased, the time available for sedimentation decreases and passage of incompletely sedimented spheres might result in artifactual decrease of experimental binding frequencies. This difficulty was overcome by considering only trajectory segments where the dimensional ratio U/aG (where U is particle velocity, a is the radius, and G is the wall shear rate) is less than 0.85, corresponding to a sphere-to-surface distance lower than about 150 nm (Goldman et al., 1967Arrest definition
Due to the fluctuations of particle velocity originating from Brownian motion (Fig. 1), there is no absolute way of detecting receptor-mediated particle arrest with 100% specificity and sensitivity. The most efficient procedure was to use empirical criteria for arrest definition and check the validity of our choice with suitable controls. Thus, a moving particle was considered as arrested at some point when the displacement during the following period of time
was lower than a threshold distance
. An arrested
particle was considered as resuming its motion when the displacement
during the following period of time
was higher than some threshold
+
. Introduction of parameter
was not essential, but it
somewhat improved the efficiency of automatic analysis. A
representative arrest is shown on Fig. 2.
The relationship between apparent and true arrest duration, i.e.,
da and
dt, can be easily calculated assuming
constant velocity for the particle before and after arrest (which is
only an approximation). We obtain:
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(3) |
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(4) |
1). The mean ratio U/aG for
particles moving with stable velocity along the surface was 0.60 in a
pool of 13 separate experiments. Parameters
and
were set at 1 pixel (0.23 µm) each. Parameter
was respectively 0.12, 0.08, and
0.04 s when G was 7, 14, and 21 s
1. The shortest detectable arrest durations
were thus 0.081, 0.060, and 0.027 s, and the relationship between true
and apparent arrest durations were respectively
dt = da + 0.003 s,
dt = da + 0.021 s and
dt = da + 0.001 s.
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Binding frequency
The binding frequency was obtained by pooling all trajectories in a given experiment and calculating the following ratio:
|
(5) |
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1.
Detachment curves
Arrest durations were used to plot the logarithm of the percentage of particles remaining bound versus time. If arrests were due to single bonds with monophasic behavior, these plots would be straight lines the slope of which would be the negative of the off rate koff. As shown below, experimental curves exhibited marked upward concavity on the time interval [0s, 1s]. Further, the initial slope (corresponding to the first tens of milliseconds) was close to zero. This was an expected artifact, due to the existence of a minimum duration of detectable arrests. Thus, two parameters could be readily extracted from a given curve: 1) the maximum slope or initial detachment rate; a practical way of obtaining this parameter was to calculate the average slope on time interval [0.04, 0.16 s]; 2) the fraction of particles remaining bound 1 s after attachment. Experimental determination was easy since detachment rates at 1 s were fairly low.Modeling arrest duration
Since results were strongly suggestive of the occurrence of a
transient binding step, three parameters were defined:
k
is the rupture frequency of the
transient binding step; k12 is the
frequency of transition from the transient binding step (numbered 1)
toward a more stable state (numbered 2) with a lifetime much larger
than 1 s.
Thus, the evolution of a single ligand-receptor interaction might be
modeled as follows:
|
(6) |
|
(7) |
is thus the product of
the number of streptavidin groups in the contact area times the
probability of bond formation for a given streptavidin. This parameter
is thus expected to be fairly proportional to the biotin site density.
Further, a well known property of Poisson law is that the mean number
of bond formed during an encounter is equal to
, and the probability
that there is at least one bond is [1
exp(
)]. Thus, the
mean number of bonds involved in an attachment event is
/[1
exp(
)].
Defining Pi, j(t) as the
probability that at time t a particle is tethered by
i bonds in weak binding state (1) and j
bonds in strong binding state (2), the general equation (for
i and j larger than 1) is:
|
(8) |
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P0,0(t)] versus
k
t were constructed
numerically for different values of dimensionless parameters
k12/k
and
. This was achieved by setting an upper limit to the number of bonds: i + j
10,
which appeared warranted since experimental data suggested that
particle arrests involved a few bonds; indeed, the estimated mean
number of bonds was less than 2 for all tested biotin densities.
Statistics
The results obtained in the present paper required to process several thousands of trajectories, yielding 957,732 positions and 1338 arrests. Since it was often necessary to pool the results of several experiments to obtain significant detachment curves, it was important to assess the statistical significance of derived parameters.
Binding frequency was derived from the proportion of time steps
followed by an arrest. The theoretical standard deviation was
calculated as (pq/n)1/2, using well
known properties of Poisson distribution. Parameter n is the
number of time steps, p is the proportion of steps followed by an arrest and q is 1
p (Snedecor and
Cochran, 1980
).
The standard error on the slope k of a detachment curve
between time t0 and
t1 was obtained by assuming Poisson
distribution for the numbers A and B of particles
detached respectively at time t between
t0 and
t1 and t higher than
t1, respectively. Since k
is close to ln[B/(A + B)]/(t1
t0), the standard error may be readily
calculated as [A/B(A + B)]1/2/(t0
t1).
Force on a bond
The force on a bond maintaining a sphere arrested in presence of
a laminar shear flow was calculated with standard mechanical reasoning,
assuming no friction at the sphere-to-surface contact and writing that
the total force and torque due to the wall, the bond and hydrodynamic
forces is zero. Assuming that the bond length L is much
smaller than the sphere radius (a) and using published results for the fluid action (Goldman et al., 1967
), the tension on the
bond may be approximated as 14.3 G
a5/2L
1/2
µ, where G is the shear rate and µ is the medium
viscosity. Assuming 5 nm for the bond length, we obtain
T = 0.47G, where the bond tension
T is expressed in piconewtons and G in
s
1.
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RESULTS |
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Streptavidin-biotin interaction generates multiple arrests of flowing spheres
In a first series of experiments, spheres were driven with low
wall shear rate (G
7 s
1)
along surfaces pretreated with various concentrations of biotinylated histidine-tagged oligopeptide. As shown in Fig.
3, while controls displayed rare arrests
with a frequency of order of 0.1 s
1, coating
surfaces with biotinylated peptides resulted in 5- to 10-fold increase
of binding frequency.
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When the chamber floor was treated with sequential dilutions of the
initial solution, the arrest frequency gradually decreased. No
significant difference was found between controls and surfaces treated
with 10
5 mg/ml peptide, while the
10
3 mg/ml solution (233 biotin
sites/µm2) yielded fivefold higher arrest
frequency than controls.
Finally, when an excess of soluble biotin (1mM) was added to block streptavidin groups on the sphere surface, the binding frequency fell to control level (Table 1). These results show that streptavidin-biotin interaction triggered detectable arrests of flowing spheres.
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Many interactions between streptavidin- and biotin-coated surfaces are transient
When a preliminary analysis of the present experimental model was
performed (Pierres et al., 1998b
) to study the distribution of arrest
durations with limited time resolution (the test time step
used for
defining arrests was 0.32 s), the initial rate of particle
detachment was much lower than reported in a previous study made on the
weak interactions between CD2 and CD48 adhesion molecules (Pierres et
al., 1996
), which seemed a reasonable finding in view of the high
affinity of streptavidin-biotin interaction. However, when the minimum
duration of detectable arrests was reduced to about 0.081 s, the
analysis of arrest duration revealed the occurrence of many transient
interactions. Typical detachment curves are displayed of Fig.
4: when the biotin surface density was
high, detachment curves displayed an initial detachment rate of 2.5 s
1 with rapid attachment strengthening,
since essentially no detachment occurred more than 0.25 s after
arrest. When biotin density was decreased, the initial detachment
rate fell to about 4 s
1 and substantial
detachment occurred until 0.5 s after attachment.
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Finally, arrests measured on controls displayed still higher maximal
detachment rate (8. 8 ± 1.7 s
1) and only
13% of these arrests lasted more than 1 s, as compared to about
40% of arrests obtained with high biotin density.
The short duration of bead arrests cannot be due to mechanical detachment of adsorbed biotinylated peptides from mica surfaces
A possible interpretation of our results might be that rapid detachment of streptavidin-coated microspheres be due to a rupture of the association between mica and the hexa-histidine moiety of biotinylated peptides. In order to rule out this explanation, stronger coupling of biotin to surfaces was performed by covalent coupling of biotinylated peptides to large (388,000 molecular weight) polylysine molecules deposited on glass surfaces. As shown on Table 2, streptavidin-coated beads exhibited transient arrests on these surfaces, and binding frequency was decreased by 86% or more by an excess of soluble biotin (1 mM).
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Experimental distributions of arrest durations are consistent with
the hypothesis that spheres are bound to biotinylated surfaces by a few
molecular interactions with an initial rupture frequency of 5.3 s
1 and spontaneous transition toward a more stable
binding state with 1.3 s
1 frequency
In view of the known properties of single molecular bonds and the
low hydrodynamic drag on flowing spheres (i.e., about 0.5 pN on a
sphere and 4 pN on a single bond maintaining the sphere at rest), it
seemed reasonable to assume that sphere arrests were due to a few
molecular interactions. The maximal detachment rate was determined for
sequential peptide dilutions. Results were, respectively: 2.51 ± 0.59 s
1, 2.70 ± 0.46 s
1, 3.98 ± 1.02 s
1, 4.64 ± 0.74 s
1, and 3.77 ± 0.85 s
1 when biotin surface density was respectively
5950, 4450, 1730, 230, and 130 molecules/µm2.
Since the differences between the last three values were not statistically different, we hypothesized that observed arrests were
essentially due to single molecular interactions when the surface
density of biotin sites was 1730 molecules/m2 or less.
Then, it was attempted to account quantitatively for detachment curves
with models involving a minimal number of parameters. We started
studying arrest duration on low biotin density surfaces assuming the
bond number was 1 at time 0. While it was not feasible to account for
experimental data with a standard model (Kaplanski et al., 1993
)
allowing continuous bond formation and detachment with adjustable rate
constants k+ and
k
(not shown), a very easy fit was
obtained with a two-constant biphasic single-bond model assuming a
transient intermediate state with detachment rate
k- and transition frequency
k12 toward a stable bound state. Estimated kinetic parameters were k
= 5.26 s
1 and
k12 = 1.32 s
1,
yielding satisfactory agreement with experimental data (Fig. 4).
The extension to high biotin densities was achieved by allowing for
multiple bonds. We assumed that bond formation during particle to
surface contact might be considered as a rare event following
Poisson's law. Denoting Poisson parameter as
, binding frequency
should thus be equal to the product of the (unknown) frequency of
sphere/surface encounters and [1
exp(
)]. Further, the
mean bond number after an arrest should be equal to
/[1
exp(
)]. As shown in Fig. 5
A, the experimental relationship between attachment
frequency and initial detachment rate was satisfactorily accounted for
by retaining for k
and
k12 the values previously obtained by
fitting the curve displayed in Fig. 4 and using for [1
exp(
)] the attachment frequency (in s
1)
times 1.004, as obtained by fitting the theoretical curve and the
experimental point corresponding to the highest binding frequency.
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A second prediction of the model would be that Poisson parameter
be
proportional to the binding site density when this is low enough. This
prediction was tested by deriving
from the initial detachment rate
for different values of the site density. As shown in Fig. 5
B, experimental data were consistent with our model over the
entire range of tested biotin surface densities.
Increasing the wall shear rate dramatically decreases the frequency of biotin-mediated attachments without any substantial change of other kinetic parameters
It was interesting to explore the influence of hydrodynamic forces
on the formation and dissociation of streptavidin-biotin bonds. As
shown in Fig. 6, when the wall shear rate
was increased threefold, the frequency of sphere attachment to surfaces
coated with high densities of biotin molecules displayed fourfold
decrease whereas the frequency of nonspecific (control) attachments
increased by 50%. The frequency of specific attachments, defined as
the difference between binding frequencies measured on biotin-coated and control surfaces, displayed still more dramatic variations since it
decreased from 0.74 ± 0.13 s
1 to
0.08 ± 0.004 s
1 when the wall shear rate
was increased from 7.2 to 21.8 s
1. As shown in
Table 3, detachment rates did not display
any significant dependence on the wall shear rate in the studied range.
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DISCUSSION |
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The purpose of this work was to show that the laminar flow chamber
operated under low shear rate may be a useful complement to atomic
force microscopy (Florin et al., 1994
; Lee et al., 1994
; Hinterdorfer
et al., 1996
; Fritz et al., 1998
), or biomembrane force probe
methodology (Evans et al., 1994
, 2001
; Merkel et al., 1999
) to dissect
molecular interactions at the single bond level in order to obtain
information on energy landscapes. Four specific features of our method
can be emphasized. 1) Since spheres scan a fairly extended area, it is
possible to explore surfaces coated with low receptor density. 2)
Ligand-receptor contacts are very brief; indeed, the relative velocity
between sphere and chamber surfaces is about half the sphere velocity
(Goldman et al., 1967
), i.e., about 3 µm/s for the lowest wall shear
rate we used. The contact time for a molecular couple of 3 nm total
length borne by interacting surfaces would thus be of order of 1 ms. It
is thus possible to analyze transient association states before
transition toward the minimum energy level makes the bond resistant to
hydrodynamic forces. 3) The force acting on receptors at the moment of
rupture ranged between 3.5 and 11 pN. Assuming that this force was low enough to prevent any deformation of interacting surfaces, the loading
rate is expected to be higher than about 3500 pN/s (i.e., 3.5 pN/1 ms).
Since the loading time is much lower than the arrest duration, bond
rupture is thus expected to occur under constant load. This regime is
quite different from atomic force microscopy, and theoretical analysis
is much simpler. Indeed, the dependence of unbinding force on loading
rate is by no means straightforward (Evans and Ritchie, 1997
). 4) It is
possible to detect bonds with a lifetime of a few tens of milliseconds.
Thus, the laminar flow chamber operated under low shear rate is ideally
suited to explore weak bonds, or the outer part of the energy landscape
of strong ligand-receptor pairs.
The power of this approach is exemplified by our analysis of
streptavidin-biotin interaction. Two pieces of information were obtained. 1) Results disclosed the existence of an intermediate binding
state with an off rate k
of 5.26 s
1 and a transition frequency toward a stable
state k12 = 1.32 s
1. The natural lifetime of this intermediate
state was thus 1/(k
+ k12) = 0.15 s. Note that the
reality of transient streptavidin-biotin interaction is rigorously
demonstrated by the findings that more than 50% of microsphere
attachments to biotinylated surfaces lasted less than 1 s, and
more than 85% of these attachments were blocked by an excess of
soluble biotin (Fig. 4 and Table 1). 2) The dramatic decrease of the
binding frequency when the velocity was increased was indicative of a
barrier external to the aforementioned transient state. This is in line
with a recent report from Chen and Springer (2001)
who concluded that
the formation of selectin receptor-ligand bond under flow was limited
by shear rate whereas dissociation was dependent on applied force.
However, the comparison between both sets of results may not be
warranted, since cells and model particles may behave quite
differently. Our results are also in line with the report that the
binding of fibrinogen to a silica surface required a minimal contact
time ranging between 50 and 200 ms (Hemmerlé et al., 1999
). Our
results would be consistent with the occurrence of a very shallow
energy minimum outside the detected binding state, leading to a
transient state with a lifetime too short to be detected. According to
Bell's Eq. 1, a 9.25-fold decrease of the binding frequency (i.e.,
from 0.74 to 0.08 s
1) when the applied force is
increased from 3.4 to 10.3 pN (corresponding to a rise of the wall
shear rate from 7.2 to 22 s
1) would be
accounted for by a distance of 1.3 nm between the intermediate state
and neighboring energy barrier (Fig. 7).
It is unlikely that these states be related to the 0.12 and 0.5 nm
barriers reported by Merkel et al. (1999)
in their study of the
streptavidin-biotin interaction: indeed, with a loading rate of 1 pN/s,
the mean rupture strength of the streptavidin-biotin bond was about 20 pN, yielding a bond lifetime of 20 s (see Fig. 3 of Merkel et al.,
1999
). This does not match the 0.15-s lifetime we obtained for state 1 (our Fig. 7) when subjected to a distractive force of about 3.5 pN. However, our findings are consistent with computer simulations from
Izrailev et al. (1997)
; see Fig. 4 of Merkel et al., (1999)
suggesting
the existence of energy barriers external to the 0. 5-nm maximum in the
streptavidin-biotin energy landscape. Clearly, complete determination
of the energy/distance plot for the streptavidin-biotin complex
requires further experimental studies.
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It must be emphasized that the "long distance" part of energy landscapes of surface-bound ligand-receptor complexes may be more dependent on cell surface features unrelated to the intrinsic properties of these ligands and receptors. It would thus be warranted to study more thoroughly the dependence of our data on the method used to couple binding sites on surfaces.
Another point of interest is the information we obtained on nonspecific interactions. Indeed, nonspecific associations are involved in any actual experimental model, and although they are usually minimized to study more useful parameters, it might be warranted to subject them to deeper analysis.
An obvious question is to assess the interest of dissecting
ligand-receptor interaction. Transient binding states may influence the
initial steps of receptor function. Thus, the ability of a selectin to
capture flowing cells is limited by kinetic as well as mechanical
properties (Chen and Springer, 2001
). Transient binding states may be
still more important under conditions of lower mechanical stress than
in blood vessels. Thus, the uptake of an antibody-coated bacterium
subjected to Brownian motion when encountering a phagocyte requires
that the cell receptor bind its ligand within a fraction of a second.
Three points must be considered to assess the validity of our conclusions. First, there is a remote possibility that sphere detachment might involve the rupture of peptide-mica interaction rather than avidin-biotin. However, this is unlikely for three reasons. 1) Since peptide attachment was stable for hours, this should not be so weak as to be unable to resist a force of a few piconewtons for less than a second. 2) The marked bond strengthening we observed within a fraction of a second following attachment was more likely to affect a newly formed association that an attachment formed several hours before. 3) Transient binding events were readily detected when biotin sites were covalently coupled to large polylysine molecules that were expected to bind to glass surface through multiple electrostatic bonds.
Second, our theoretical model assuming initial formation of multiple
bonds and excluding delayed bond formation is especially suited to
artificial spheres where no lateral diffusion of surface molecules is
expected. This property and the very short length of binding molecules
is consistent with the low bond number found even with the highest
biotin concentration. Indeed, assuming a ligand + receptor length
L of order of 3 nm, the contact area 2
aL is
about 0.026 µm2, which would allow the
formation of many bonds if binding sites were connected to surfaces
through long and flexible linkers.
Third, although it is difficult to estimate the size of ligand-receptor couples with high accuracy, the resulting uncertainty on the force applied to bonds formed between spheres and surfaces is expected to remain low. Indeed, this force is proportional to the square root of (a/L).
We conclude that the laminar flow chamber operated under low shear rate may provide new and useful information on the fine properties of ligand-receptor bonds.
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ACKNOWLEDGMENTS |
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This work was supported in part by a ministerial grant (Bioinformatics Programme).
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FOOTNOTES |
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.
Address reprint requests to Pr. Pierre Bongrand, Laboratoire d'Immunologie, INSERM U. 387, Hôpital Ste-Marguerite, BP 29, 13274 Marseille Cedex 09, France. Tel.: 33-491-26-03-31; Fax: 33-491-75-73-28; E-mail: bongrand{at}marseille.inserm.fr.
Submitted September 10, 2001, and accepted for publication March 6, 2002.
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REFERENCES |
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Biophys J, June 2002, p. 3214-3223, Vol. 82, No. 6
© 2002 by the Biophysical Society 0006-3495/02/06/3214/10 $2.00
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