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Biophys J, August 2002, p. 920-931, Vol. 83, No. 2
Département de Biologie Moléculaire et Structurale, Laboratoire BMC (UMR CNRS 5090), CEA-Grenoble, Grenoble, France
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ABSTRACT |
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Cyclic nucleotide-gated channels are tetramers composed
of homologous
and
subunits. C-terminal truncation mutants of
the
and
subunits of the retinal rod channel were expressed in Xenopus oocytes, and analyzed for cGMP- and cAMP-induced
currents (single-channel records and macroscopic currents). When the
subunit truncated downstream of the cGMP-binding site (
D608stop) is co-injected with truncated
subunits, the heteromeric channels present a drastic increase of cAMP sensitivity. A partial effect is
observed with heteromeric
R656stop-containing channels, while
K665stop-containing channels behave like
wt/
wt. The three truncated
subunits have wild-type activity when expressed alone. Heteromeric channels composed of
wt or truncated
subunits and
chimeric
subunits containing the pore domain of the
subunit
have the same cAMP sensitivity as
-only channels. The results
disclose the key role of two domains distinct from the nucleotide
binding site in the gating of heteromeric channels by cAMP: the pore of the
subunit, which has an activating effect, and a conserved domain
situated downstream of the cGMP-binding site in the
subunit (I609-K665), which inhibits this effect.
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INTRODUCTION |
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The cyclic GMP-activated rod channels, situated
in the plasma membrane of retinal rod outer segments, are responsible
for the entry of cations (mainly sodium, but also calcium) in the cell
in the dark. Upon light-induced activation of the phototransduction cascade the concentration of cGMP is reduced, which results in closure
of the channels and hyperpolarization of the cell. The retinal rod
channel belongs to the family of cyclic nucleotide-gated (CNG)
channels, involved in sensory transduction, which are activated by
direct binding of the cyclic nucleotide to a site situated in the
cytoplasmic C-terminal region. The three types of CNG channels (rod,
olfactory neuron, and cone channels) are tetramers (for a review see
Zagotta and Siegelbaum, 1996
) composed of at least two (rod, cone) or
three (olfactory neuron) types of homologous subunits (Chen et al.,
1993
; Körschen et al., 1995
; Biel et al., 1996
; Sundin et al.,
2000
; Kohl et al., 2000
; Gerstner et al., 2000
; Liman and Buck, 1994
;
Bradley et al., 1994
; Sautter et al., 1998
; Bönigk et al., 1999
).
Only the
subunits can form functional channels when expressed
alone;
subunits have no channel activity on their own, but when
co-expressed with
subunits, modify several characteristics of the
channels, among which is the sensitivity to cAMP. The sensitivity to
cAMP of heteromeric rod channels expressed in oocytes is higher than
that of
-only channels (Fodor and Zagotta, 1996
; Gordon et al.,
1996
; Shammat and Gordon, 1999
; Pagès et al., 2000
), and similar
to that of native channels (Tanaka et al., 1989
; Gavazzo et al., 1996
;
Picco et al., 1996
). The rod heteromeric channel is also much more
sensitive to L-cis-diltiazem (Chen et al., 1993
;
Körschen et al., 1995
) than the homomeric channel. This property
can be used to check that the two subunits indeed associate, or to
estimate the homogeneity of the channel population obtained when
co-injecting
and
mRNAs.
The structure of the nucleotide binding site of the rod
subunit was
predicted by homology with the cAMP binding site of the catabolite gene
activator protein (CAP) of Escherichia coli (Kumar and
Weber, 1992
), which is also homologous to that of the regulatory
subunits of the cAMP- and cGMP-activated protein kinases (Kaupp et al.,
1989
; Shabb and Corbin, 1992
): it consists of an
-helix (A),
followed by eight
-rolls, and two additional
-helices (B and C).
In CAP, binding of cAMP modifies the orientation of the DNA binding
domain situated downstream of the cAMP binding site (Passner et al.,
2000
), while in the regulatory subunits of cAMP/cGMP dependent kinases,
the effector domain is situated upstream of the nucleotide binding
site, revealing some variability in cyclic nucleotide-induced
activation. Binding of the nucleotide to the nucleotide binding site in
CNG channels induces an allosteric transition that allows the channel
to open, and cations to pass through the pore formed by the assembled
pore-domains of the four subunits. The pore is homologous to that of
voltage-gated K+ channels except at the level of
the selectivity filter, where it is shorter. Structure predictions of
the pore domain of the rod channel, based on the structure of the KcsA
K+ channel (Doyle et al., 1998
; Perozo et al.,
1999
) have allowed great progress in the approach of the gating
mechanism. The pore of the
subunit was shown to undergo a
conformation change associated with channel opening (Becchetti et al.,
1999
; Becchetti and Roncaglia, 2000
; Liu and Siegelbaum, 2000
).
Recently, it was proposed that rotation of the domain situated between
the last transmembrane helix (S6, downstream of the pore domain) and
the nucleotide-binding site ("C-linker") initiates rotation of S6
and pore opening (Johnson and Zagotta, 2001
; Flynn and Zagotta, 2001
).
A segment of ~50 residues, situated immediately downstream of the
C-helix of the binding site in the rod channel
subunits (I611-K665), is highly conserved among rod, olfactory neuron, and cone
channels (Fig. 1). This domain was
classified as "PD004548" in the ProDom release 2000.1 (Corpet et
al., 2000
) when this work started. In the ProDom release 2001.2, PD004548 also includes part of the last helix (
C) of the nucleotide
binding site. A conserved domain (PD012882) is present in a similar
position downstream of the nucleotide binding site of all known
(bovine, human, rat) rod
subunits (1202-1282 in the bovine rod
subunit); this domain is not conserved in other
subunits, but the
second olfactory
subunit (Sautter et al., 1998
: CNG4.3;
Bönigk et al., 1999
: CNG
1b), which associates with the other
olfactory OCNC1 and OCNC2 subunits to form the olfactory neuron
channel, is identical to the rod
subunit. This suggests that the
domains downstream of the cGMP-binding site may be important for
channel assembly or function. According to PHD (Profile network
prediction HeiDelberg) structure prediction (Rost and Sander, 1993
)
(Fig. 1), PD004548 (
subunit) downstream of the cGMP-binding site
consists for the most part of an
-helix (K619-F663), which is
predicted by the program COILS (Lupas, 1996
) as having a high
probability of forming a coiled-coil domain (not shown). The PD012882
domain in the
subunit also presents a predicted
-helical
structure composed of two helices (P1219-M1232 and R1241-K1270); the
second
-helix is also susceptible to form a coiled-coil domain,
although with a lesser probability than the
-helix in PD004548.
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The pore domains of all CNG channel
subunits are highly
homologous, and all lack the YG residues in the GYGD sequence which is
characteristic of the K+ channel selectivity
filter. The pore domain of
subunits from rod and cone channels is
homologous to that of
subunits, but has different charged residues.
An alignment is shown in Fig. 2.
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We took advantage of the different properties of homomeric and
heteromeric channels concerning the sensitivity to cAMP to investigate
the possible role of the conserved C-terminal domains of the
and
subunits, which has not been studied previously. We report here a
study of several C-terminal truncations of the
subunit, expressed
alone or co-expressed with
subunits, wild type, or truncated in
their C-terminal domain. We also studied possible functional
differences conferred by the pore of the
subunit by constructing
chimeras of the two rod subunits with exchanged pore domains.
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MATERIALS AND METHODS |
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cDNAs and mutations
The bovine rod
subunits were a gift of Prof. U. B. Kaupp. The bovine rod
subunit CNG4c (Biel et al., 1996
) starting at V572 downstream of the GARP region previously described (Pagès et
al., 2000
) was used. Residue numbers in the
subunit correspond to
the sequence of the complete
subunit (Körschen et al., 1995
). The
and
subunits are inserted in the pGemHe vector (Liman et
al., 1992
), and the ATG codon is preceded by a Kozak consensus sequence
(CCACC) (Kozak, 1984
). Truncations were constructed by PCR by
introducing a stop codon at the required position.
Construction of the
[
-pore] chimera
subunit containing the pore was subcloned
into pBluescript. EcoRI and BamHI restriction
sites were introduced by silent mutations at the 5' and 3' ends of the
pore domain: ggG AAT TCt (EcoRI) in 5' at the position
corresponding to
G933N944S945, and ccG GAT CCt (BamH1) in 3' at the position corresponding
to P964D965P966.
The two complementary oligonucleotides corresponding to the complete
pore domain of the
subunit with the EcoR1 and BamH1 restriction sites at the 5' and 3' ends were
synthesized and ligated in place of the pore domain in the
subunit
fragment. The fragment containing the pore of the
subunit was then
exchanged for the corresponding fragment in the wild-type
subunit,
giving the
[
-pore] construct (corresponding mutated protein
domain: N944SYVYSLYWSTLTLTTIGETPDP966).
Construction of the
[
-pore] chimera
subunit containing the pore was subcloned
into pBluescript. The EcoR1 and BamH1 sites were
introduced at the 5' and 3' ends of pore domain of the
subunit
cDNA, mutating the
A344R345K346
sequence upstream of the pore into ANS (GCG AAT TCA), and the last
three residues of the pore
(P365P366P367)
into PDP (ccG GAT CCt). The pore domain of the
subunit with the
EcoR1/BamH1 restriction sites was excised from
the mutated
construct (containing the two restriction sites) in
pBluescript, and ligated in place of the pore of the
subunit. A
wild-type fragment containing the pore in the complete
wt
cDNA in pGemHe was then exchanged for the corresponding fragment
containing the pore of the
subunit, giving the
[
-pore]
construct (corresponding protein domain: N345SYIRCYYWAVKTLITIGGLPDP367).
All mutations were verified by sequencing.
Channel expression
Capped mRNAs were synthesized in vitro from linearized plasmids
in the presence of RNA cap structure analogs (New England Biolabs, Beverly, MA), and injected into Xenopus
oocytes (25 ng/oocyte for macroscopic currents or 0.25 ng/oocyte for
single-channel records). For coexpression of
and
subunits,
mRNA and
mRNA were mixed and injected into the oocyte. The
/
ratio was between 2 and 3. Oocytes were incubated in Barth's medium
for 2-10 days at 19°C for macroscopic currents (or at 4°C after
18-24 h at 19°C for single-channel currents) before measurements.
Patch-clamp recording of excised inside-out patches
The solution in the pipette and in the perfusion medium was 100 mM KCl, 10 mM EGTA/KOH, 10 mM Hepes/KOH, pH 7.2. The cytoplasmic face of the patch was superfused by solutions containing variable nucleotide concentrations using an RSC100 rapid solution changer (Bio-Logic, Claix, France). The saturating cGMP and cAMP concentrations were, respectively, 500 µM and 20 mM. Currents were recorded with an RK-400 patch amplifier (Bio-Logic).
Pomax (open probability at saturating
concentrations of cGMP and cAMP) was obtained from single-channel
record analysis. Single-channel records at +80 mV (20-30-s duration)
sampled at 33 kHz and numerically filtered (Hanning window) at 1 kHz
were used to compute amplitude histograms using the Bio-Patch software
(Bio-Logic). The same current interval (4 pA) for all records was
divided into 50 classes for building the histograms. The maximum number
of events/pA was at least 106. The histograms
were fitted with two or three Gaussian curves. Similar
Pomax values were obtained from
records filtered at 4 kHz, as previously described (Pagès et al.,
2000
).
Macroscopic currents induced by voltage steps (500 ms, ±80 mV) were
low-pass filtered at 300 Hz and digitized at 1 kHz using pCLAMP 6.0 (Axon Instruments, Union City, CA). The series resistance was
compensated for (resulting value <1 M
). Each record was averaged three times. Dose-response curves were obtained by plotting the current
at +80 mV as a function of nucleotide concentration after subtraction
of the leak current.
Curve fitting
Data were fitted with the Hill equation or the
Monod-Wyman-Changeux (MWC) model (Monod et al., 1965
) using the
Microcal Origin software.
Hill equation
I/Imax = 1/(1 + (EC50/X)nH), with EC50 the ligand concentration that gives half-maximal effect, nH the Hill number, and X the ligand concentration.MWC model
Assuming that the rod channel is a tetramer (Liu et al., 1996
Chemicals
L-cis-Diltiazem was a gift of Synthelabo Recherche (Bagneux, France).
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RESULTS |
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Role of the C-terminal domains
To determine whether the C-terminal domains downstream of the
nucleotide binding site may be involved in channel gating, we studied
the effect of C-terminal truncations on the efficacy of cAMP and cGMP.
The sites of truncation were chosen according to the predicted
structure of the C-terminal domains (Fig. 1). The
subunit was
truncated after K665 (the last residue of the conserved PD004548
domain), R656 (deleting part of PD004548), and D608 (deleting the whole
C-terminal domain downstream of the nucleotide binding site, including
the last two residues of the
C-helix). The
subunit was truncated
after S1271 (at the end of the predicted helical domain of PD012882),
L1221 (the third residue of the first predicted
helix of PD012882
downstream of the nucleotide binding site), and N1202 (deleting the
whole C-terminal domain downstream of the nucleotide binding site).
Like the
wt subunit, the truncated
subunits did not
give rise to channel activity when expressed alone. The selectivity for
cGMP versus cAMP was determined from single-channel records (from the
open probability at saturating cGMP and cAMP concentrations) and from
macroscopic currents
(Imax(cAMP)/Imax(cGMP) ratios) to obtain sufficient data for statistical analysis. When measuring macroscopic currents, the extent of inhibition by
L-cis-diltiazem was used as a tool to
test the homogeneity of the channel population: since the effect of
diltiazem on mutated channels is unknown, this was first determined
from single-channel records. The EC50 of several
constructions for cGMP and cAMP were determined from macroscopic
currents. All measurements were performed on excised inside-out patches.
Single-channel records
The
wt subunit or the truncated
subunits
(
K665stop,
R656stop, and
D608stop) were co-expressed with
wt or the truncated
L1221stop. Single-channel records
were used to determine the open probability of the different
heteromeric channels in the presence of saturating concentrations of
cGMP (Pomax cGMP), cGMP + L-cis-diltiazem, and cAMP
(Pomax cAMP). The unitary currents had
either the characteristics of
-only channels or markedly different
characteristics, which were therefore attributed to heteromers. As
previously described for oocytes co-injected with
wt and
wt mRNAs (Pagès et al., 2000
2
2 stoichiometry are
obtained (Shammat and Gordon, 1999
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wt and
wt/
wt channels are shown for comparison:
direct measurement of Pomax cAMP has
not as yet been reported, but the values are consistent with published
Imax(cAMP)/Imax(cGMP) ratios, and records in the presence of cGMP and cGMP + diltiazem are
consistent with our previous results (Pagès et al., 2000
wt/
wt channels, suggesting that neither C-terminal domain plays a major role in cGMP-induced activity. This
high Pomax value allows unambiguous
determination of the number of channels in the patch. The sensitivity
to cAMP is, however, clearly modified by truncating the
subunit: a
remarkable increase in Pomax cAMP is
observed for
D608stop-containing heteromeric channels, and also, to
a lesser extent with the
R656stop subunit, while
K665stop-containing heteromeric channels are very similar to
wt/
wt channels. For the three truncated
subunits results obtained with
wt and
L1221stop are
similar, although with an apparently higher sensitivity to cAMP for
L1221stop compared to
wt.
Inhibition by L-cis-diltiazem is close to 100%
for
K665stop- and
R656stop-containing heteromers, but notably
reduced for the heteromeric channels containing the shorter
subunit
D608stop, with values intermediate between that for
wt
and that for
wt/
wt.
Although no single-channel record was obtained for
D608stop/
wt, and only one or two measurements are
given in Table 1 for
R656stop/
wt,
D608stop/
L1221stop, and
R656stop/
L1221stop, qualitatively
similar results were obtained for each channel type from several
patches in which two or more channels were present: the example of a
two-channel record shown in Fig. 3 for
D608stop/
wt channels clearly reveals an increased sensitivity to cAMP and reduced
sensitivity to diltiazem compared to
wt/
wt
channels. For
R656stop- and
K665stop-containing heteromeric
channels, ~100% inhibition by diltiazem was also measured in several
patches with two or three channels.
It is important to note that the Pomax
values obtained from single-channel analysis may slightly vary
depending on the record, due to the irregular occurrence of long closed
periods, which are particularly frequent and long in cAMP, but also
present in cGMP. The absence, or the long duration, of closed periods
within the records used for analysis may lead to overestimated or
underestimated Pomax values. As we
failed to obtain a sufficient number of patches with a single channel,
these values should be considered as indicative.
Macroscopic current measurements
Activity of rod
subunits truncated in their
C-terminal domain (homomeric channels). As a control, the activity
of the truncated
-only channels was studied from macroscopic current
analysis. The results show that currents from all the truncated
-only channels present
Imax(cAMP)/Imax(cGMP)
ratios similar to those observed with
wt channels (Table
2). The EC50 for
cGMP of
D608stop (33 ± 1 µM, see Fig. 6 below) is similar to
that previously measured for
wt channels (29.9 ± 0.8 µM; Pagès et al., 2000
subunits. Therefore, in the
case of homomeric
channels, the whole domain downstream of D608 at
the C-terminal end of the
C-helix of the nucleotide binding site can
be deleted without a detectable effect on cGMP- and cAMP-induced
currents.
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and
subunits. When
measuring macroscopic currents from oocytes co-injected with the mRNAs
of the two types of subunits, the homogeneity of the channel population
in the patches was checked by comparing the selectivity for cGMP versus
cAMP and the sensitivity to
L-cis-diltiazem to those determined
from unitary currents (Table 1).
The results obtained with truncated
subunits co-expressed with
wt subunits are indicated in Table 2. Consistent with the single-channel records, the
Imax(cAMP)/Imax(cGMP)
ratio is similar to that of
wt/
wt channels
when the
wt subunit is co-expressed with the truncated
K665stop, and significantly higher when it is co-expressed with the
shorter
D608stop subunit. For
R656stop/
wt, however,
the
Imax(cAMP)/Imax(cGMP)
ratio is not significantly different from that measured for
wt/
wt channels, and both the Imax(cAMP)/Imax(cGMP)
ratio and inhibition by
L-cis-diltiazem are notably lower than
those measured from single-channel records. Although, as noted above,
there might be some uncertainty in the Pomax(cAMP)/Pomax(cGMP)
ratios in Table 1, the lower inhibition by diltiazem measured from
macroscopic currents from oocytes co-injected with
R656stop
and
wt mRNAs suggests that the patches contained a
nonnegligible proportion of
-only channels. When measuring single-channel records from these oocytes and from oocytes co-injected with
D608stop and
wt mRNAs, channels with
-only
characteristics were indeed observed. This suggests that for these two
channel types, the
Imax(cAMP)/Imax(cGMP)
ratios might be underestimated. The reason for this heterogeneity
remains unclear.
In contrast, results from macroscopic currents obtained with
heteromeric channels containing the truncated
L1221stop subunit (Imax(cAMP)/Imax(cGMP)
ratio and extent of inhibition by
L-cis-diltiazem) are close to those
obtained from single-channel records, suggesting that in these cases
the channel populations mainly consisted of heteromeric channels. The
increase of the
Imax(cAMP)/Imax(cGMP) ratio associated with increasing truncation of the
subunit is illustrated by examples of current records in Fig.
4, and mean values of several
measurements are indicated in Table 2: as observed in single-channel
records, truncation downstream of K665 has little or no effect, while
the
Imax(cAMP)/Imax(cGMP)
ratio is markedly increased for
R656stop/
L1221stop channels, and
dramatically increased for
D608/
L1221stop channels. Qualitatively
similar results were obtained with the two other truncated
subunits
S1271stop and
N1202stop. Dose-response curves for cGMP and cAMP measured with
wt/
L1221stop channels and
D608stop/
L1221stop channels are shown in Fig.
5. The EC50 of
D608stop/
L1221stop channels for cAMP (224 ± 6 µM) is
dramatically reduced compared to that measured for an
wt/
wt or
wt/
L1221 channel;
the EC50 for cGMP (22 ± 2 µM) is also
reduced, to a lesser extent, compared to that of
wt/
wt channels or an
wt/
L1221 channel. The characteristics of
wt/
L1221stop channels
(Imax(cAMP)/Imax(cGMP)
ratio, Table 2; EC50 for cGMP and cAMP, Fig. 5) are slightly different
from those of
wt/
wt channels. Statistical
analysis of the data suggests that the
Imax(cAMP)/Imax(cGMP)
ratio measured with
wt/
L1221stop is significantly
higher, and the EC50 for cGMP and cAMP
significantly lower than those measured with
wt/
wt channels. Thus, truncating the
C-terminal domain of the
subunit downstream of the nucleotide binding site may have a slight effect on cGMP and cAMP sensitivity, but
this effect is much less dramatic than that of truncating the
C-terminal domain of the
subunit. Both effects may add up in the
double mutant, and account for the apparently higher cAMP sensitivity
of
D608stop/
L1221stop compared to
D608stop/
wt channels (Table 2 and records in Fig. 3). The effects of truncating the
C-terminal domains of
and
subunits on the
EC50 for cGMP and cAMP and on the
Imax(cAMP)/Imax(cGMP)
ratios are summarized in Fig. 6.
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subunits (Table 2) and with
K665stop- and
R656stop-containing heteromers, very small
cGMP-induced currents are reproducibly measured when
D608stop mRNA
is co-injected with
wt or
L1221stop mRNAs (~7% and
4% of the currents observed with control oocytes, respectively) (Table
2). For both channels, however, the
Pomax cGMP was shown to be close to 1 (Table 1), and the possible reduction of unitary current amplitude
(Fig. 3) is too small to account for the reduced amplitude of the
currents. Very low currents were also obtained with oocytes
co-expressing
D608stop and
S1271stop, as well as the shorter
subunit
N1202stop (therefore indicating that the low channel
activity is not due to unmasking a retention or degradation sequence
that could be present downstream of the nucleotide binding domain in
the
subunit). This reduction of activity, which is little-affected
by the length of the
subunit, is thus conferred by truncation of
the
subunit, although homomeric
D608stop channels have normal
activity.
D608stop and
subunits nevertheless assemble with high
efficiency; otherwise, large currents with
-only channel
characteristics would be expected. It is possible that truncation of
the
subunit unmasks a retention or degradation sequence in another
part of the
subunit. Another possible explanation could be that, in
the absence of the C-terminal domain of the
subunit, channels of
different stoichiometries can be formed (
3
or 
3), but that they have no channel
activity. This question will be addressed elsewhere.
Role of the pore domains
In an attempt to identify other domains that may be responsible
for cAMP sensitivity, we constructed two chimeras of
and
subunits: a
subunit with the pore domain of the
subunit (
[
-pore]) and the symmetric construction of the
subunit
with the pore domain of the
subunit (
[
-pore]).
Like
wt subunits,
[
-pore] alone had no channel
activity. In contrast, when
[
-pore] mRNA was co-injected with
wt mRNA, cGMP-induced currents that could be inhibited by
L-cis-diltiazem (67% ± 2%) were
observed (Table 3), indicating that the
channels were at least for a large part heteromeric channels. However, the cAMP sensitivity of these channels was reduced to that of
-only
channels, or even lower
(Imax(cAMP)/Imax(cGMP) = 0.024 ± 0.002). Because the sensitivity to cAMP of heteromeric
channels containing truncated
and
subunits is markedly
increased (see above), we also studied the cAMP sensitivity of
heteromeric
D608stop/
[
-pore]L1221stop and
R656/
[
-pore]L1221stop channels to determine which of the two
modifications (pore exchange or C-terminal truncation) predominates. For these two types of channels (Table 3), cAMP sensitivity was inferior or equal to that of
-only channels, while
L-cis-diltiazem sensitivity was
unambiguously different from that of
-only channels, and close to
that of
D608stop/
L1221stop or
R656/
L1221stop channels,
respectively (Table 1), indicating that the channel population was
mainly composed of heteromers. The
Imax(cAMP)/Imax(cGMP) measured for heteromeric channels with chimeric
subunits having an
-pore domain are compared in Fig. 7 to
those measured with the corresponding channels containing nonchimeric
subunits. These results show that the pore domain of the
subunit plays a key role concerning the gating efficacy of cAMP, and
that C-terminal truncation of the
subunit has no effect if the pore
of the
subunit is exchanged for that of the
subunit.
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No channel activity was detected with the
[
-pore] subunit mRNA,
either when injected alone or when co-injected with
wt mRNA,
wt mRNA, or with
[
-pore] mRNA.
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DISCUSSION |
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The results presented here demonstrate the role of two domains of
the retinal cGMP-activated channel, distinct from the
nucleotide-binding site, concerning the sensitivity to cAMP: a
conserved C-terminal domain situated downstream of the cGMP-binding
site in the
subunit (PD004548), and the pore domain of the
subunit. Exchanging the pore domains or removing the C-terminal domains
produces much larger changes in sensitivity than any previously
reported mutation.
The pore domain of the
subunit
The possible influence of the pore of the
subunit on the
activity of heteromeric channels has not been studied previously. The
striking finding presented here (Fig. 7) is that replacing the pore of
the
subunit by that of the
subunit completely abolishes the
effect of the
subunit on the sensitivity to cAMP of heteromeric
channels. Moreover, truncation of the C-terminal domain PD004548 in the
subunit, which increases cAMP sensitivity, has no effect if the
pore of the
subunit is exchanged for that of the
subunit: this
suggests that high cAMP sensitivity is in fact due to the
-pore
domain but is partially masked in the presence of
wt, and
that the effect of deleting PD004548 in the
subunit is to relieve
this inhibition of cAMP sensitivity rather than to directly increase
cAMP sensitivity.
The exchanged domains only comprise 16 residues: the
-pore segment
V348YSLYWSTLTLTTIGET364
replacing
I947RCYYWAVKTLITIGGL963 in
the
subunit. The main difference between the two pore domains (Fig.
2) is the presence of distinct charged residues. E363 near the
selectivity filter of the rod
subunit was shown to be responsible for calcium block of homomeric
channels (Root and MacKinnon, 1993
;
Eismann et al., 1994
). Mutating the corresponding residue in the
olfactory neuron
subunit is also responsible for calcium blockage,
and decreases the gating efficacy of both cGMP and cAMP (Gavazzo et
al., 2000
). The residue at the corresponding place in the
subunit
is uncharged (G962), and an acid residue is situated three residues
downstream (D965) in place of P366 in the
subunit. In addition,
there are two basic residues (R948 and K955) in the pore of the
subunit (corresponding to the hydrophobic residues Y349 and L356 in the
subunit). Point mutations of the corresponding residues in the pore
of the
subunit will be needed to determine the residue(s)
responsible for the effect. It is interesting that the pore of the
third olfactory channel subunit (CNG4.3 or CNG
1b, identical to the
rod
subunit: Sautter et al., 1998
; Bönigk et al., 1999
) and
that of the
subunit of the cone channel (human and mouse: Sundin et
al., 2000
; Kohl et al., 2000
; Gerstner et al., 2000
), which are also
responsible for increased cAMP sensitivity of these channels, contain
two basic residues and an acid residue at the same positions as the rod
subunit (Fig. 2). However, although the second olfactory channel
subunit (OCNC2) also confers increased cAMP sensitivity to the
subunit (Liman and Buck, 1994
; Bradley et al., 1994
) its pore does not
contain the three charged residues as that of the other
subunits;
in fact, for its pore domain, this subunit is homologous to an
subunit.
The fact that the symmetric construct
[
-pore], expressed alone
or with
wt subunits, has no channel activity suggests
that four
-pore domains are unable to form a functional cationic
channel. However, this is not the only reason for the absence of
activity of
subunits alone, because
[
-pore]s have no
channel activity either when expressed alone. The fact that
[
-pore] has no channel activity when expressed with
wt or
[
-pore] moreover suggests that the
-pore
domain may be unable to function when inserted in the
subunit.
Alternatively, the absence of detected activity could be due to rapid
inactivation, as previously observed for several mutants of the residue
E363 in the pore of the rod
subunit (Bucossi et al., 1996
); given
our experimental conditions, however, we estimate that inactivation
should be complete in <10 ms after the start of the voltage pulse to
remain undetected.
The C-terminal domains
The other striking finding is the role of the C-terminal domain
downstream of the cGMP-binding site of the
subunit in heteromeric channel function. When the
subunit truncated downstream of D608, which corresponds to the deletion of the whole C-terminal domain downstream of the cGMP-binding site, is co-expressed with truncated
subunits, a drastic effect on cAMP sensitivity is observed
(Pomax cAMP measured from
single-channel records and
Imax(cAMP)/Imax(cGMP) ratio measured from macroscopic currents: Table 1 and 2). Truncation of
the
subunit C-terminus domain downstream of K665 has little effect,
while truncation downstream of R656 has a partial but well-marked
effect, suggesting that the presence of the entire predicted
-helix
of the PD004548 domain downstream of the cGMP-binding site plays a
major role for cAMP sensitivity of wild-type heteromeric channels.
The discrepancies between the values obtained from single-channel
records and macroscopic current measurements might be explained by the
irregular occurrence of long closed periods in cAMP-, and (although to
a lesser extent) in cGMP-induced currents (see Fig. 3), which are fully
taken into account in macroscopic currents, but poorly in
single-channel analysis. The errors on
Pomax (cAMP) and
Pomax (cGMP) add up in the
Pomax
(cAMP)/Pomax (cGMP) ratio. However, a
proportion of
-only channels can be present in the patches from
oocytes injected with
and
mRNAs used for macroscopic current
measurements; comparing the values for the extent of inhibition by
diltiazem in Table 1 (single-channel) and Table 2 (macroscopic currents) suggests that part of the macroscopic currents in patches from oocytes co-injected with
and
mRNAs is due to homomeric channels.
The EC50 for cAMP measured from macroscopic
currents of oocytes expressing
D608stop/
L1221stop channels is
also very much reduced (224 ± 6 µM), as is the
EC50 for cGMP (22 ± 2 µM) compared to
those of
wt/
wt channels (1607 ± 31 µM and 35 ± 0.6 µM, respectively) (Fig. 5). After normalizing
the dose-response curves to the Pomax values obtained from single-channel records, the dose-response curves
for cAMP and cGMP of the
D608stop/
L1221stop channel were fitted
with the MWC allosteric model (Monod et al., 1965
) (Fig. 8), which can be used as an approximation
of the CNG channel mechanism (Zagotta and Siegelbaum, 1996
). According
to this model, stabilization of the open state is achieved
independently of the ligand by decreasing the parameter L
(L = [T]/[R], equilibrium
constant between closed and open states in the absence of ligand),
which is a characteristic of the protein. The equilibrium constant
between fully liganded closed and open states being equal to
Lc4, the open state can be stabilized
in the presence of ligand by decreasing L and/or by
decreasing c = KR/KT
(ratio of the affinity of the ligand for the closed state to the
affinity for the open state). Fig. 8 shows that it is possible to fit
the data by only reducing c and
KR for both ligands (without reducing
L), but that decreasing L only cannot account for
the data: when L is reduced, whatever its value, it is
necessary to also decrease c (increase the gating efficacy)
and KR (increase the affinity of the
open state) for cAMP. Thus, interpreting the data with the MWC model suggests that, in
D608stop/
L1221stop channels, the conformation of nucleotide binding sites is different from that of the wild-type channel; i.e., that the C-terminal domains constrain the conformation of the nucleotide binding sites, resulting in lowering the efficacy of
cGMP and more particularly, cAMP (increase "c" and
"KR"). The fit does not exclude
that the truncation may in addition facilitate the transition to the
open state (reduce "L"). It should be noted that
although high cAMP sensitivity is conferred by the
subunit (as
discussed above), most of the constraint is relieved by truncating the
C-terminus of the
subunit (compare dose-response curves for
wt/
L1221stop and for
D608stop/
L1221stop, Fig.
5), suggesting that intersubunit interactions are involved in the
conformation of the oligomer.
|
Finally, our results indicate that although
L-cis-diltiazem sensitivity is conferred to the
rod channel by the
subunit, the presence of part of the PD004548
domain in the
subunit (D608-R656) is necessary for full inhibition
of heteromeric channels. Complete inhibition of heteromeric channels
containing truncated
L1221stop subunits (
K665stop/
L1221stop
and
R656stop/
L1221stop, Table