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* Department of Mechanical Engineering and Material Sciences, Duke University, Durham, North Carolina 27708 USA;
Department of Physiology and Biophysics, University of Texas Medical Branch, Galveston, Texas 77555 USA; and
Department of Biological Sciences, Columbia University, New York, New York 10027 USA
Correspondence: Address reprint requests to Julio M. Fernandez, Dept. of Biological Sciences, Columbia University, New York, NY 10027 USA. E-mail: jfernandez{at}columbia.edu.
| ABSTRACT |
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200 pN heparin displays a large enthalpic elasticity, which is evident as a pronounced plateau in the force-extension relationship. We determine that this enthalpic elasticity is produced by sugar rings of heparin flipping to more energetic and more extended conformations. We estimate that in vivo, the forces which stretch heparin are comparable to the forces that trigger conformational transitions in our single molecule atomic force microscopy measurements. We hypothesize that these conformational transitions have biological significance in that they provide a mechanism to finely regulate the affinity of various ligands toward heparin, for example, in secretory granules undergoing exocytosis and during the mechanical interactions between cells and the extracellular matrix. | INTRODUCTION |
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(1
4) or ß(1
3) glycosidic bonds. GAG molecules are negatively charged due to a high density of sulfate and carboxylate groups. GAG can be found either in soluble form, as in the case of heparin and hyaluronic acid, or covalently linked to the serine residues of a protein backbone, forming proteoglycans. GAG play major roles in the extracellular matrix where they serve as ligands controlling cell migration and cell adhesion. Of particular interest to us is the GAG heparin, a soluble molecule that has a major role in defining the physical and chemical properties of the extracellular matrix and that binds fibronectin with high affinity (Sharma et al., 1999
Most of the studies examining the properties of heparin have been done with in vitro biochemistry in the absence of a mechanical tension. However, the results of Harold Erickson and collaborators demonstrated that the extracellular matrix is normally under a stretching force (Ohashi et al., 1999
). Furthermore, the recent data demonstrating the presence of cryptic sites in the fibronectin molecule show that this matrix protein functions as a force transducer. Since heparin polysaccharides bind to the fibronectin matrix in vivo, it is likely that heparin also is placed under mechanical stress and that there are force-driven conformations in heparin that are physiologically significant.
Another important source of heparin is found in the secretory granules of mast cells. These granules contain a polymeric matrix composed of heparin sulfate proteoglycan, which stores a variety of secretory products such as amines, enzymes, and chemotactic factors (Fernandez et al., 1991
; Humphries et al., 1999
; Metcalfe et al., 1981
). Because of the high density of fixed negative charges associated with the sulfate groups of heparin, the matrix acts like a cationic ion exchanger that regulates the release of histamine during exocytosis (Fernandez et al., 1991
; Metcalfe et al., 1981
; Parpura and Fernandez, 1996
; Uvnas and Aborg, 1983
). During exocytosis, the influx of sodium counterions, from the extracellular medium into the matrix, is accompanied by a large influx of water causing the matrix to swell (Curran and Brodwick, 1991
; Fernandez et al., 1991
; Monck et al., 1991
; Parpura and Fernandez, 1996
). The swelling pressure of an expanding granule matrix that stretches the proteoglycan molecules was determined to be as high as 12 bar (Nanavati and Fernandez, 1993
). It is then likely that during exocytosis the heparin molecules that form the granule matrix are placed under a stretching force.
These considerations together show that heparin molecules are likely to function in a physiological environment that normally includes a mechanical stretching force. Yet nothing is known about the properties of heparin under a mechanical load.
A commonly held view proposes that the pyranose ring, the main building block of polysaccharides, is locked into a chair conformation and serves as a somewhat rigid platform for ligand binding. The structural features of polysaccharide molecules such as heparin are thought to result mainly from their secondary structure (Venkataraman et al., 1994
). Pyranose-based sugars have two distinct chair conformations: 4C1 and 1C4 separated by a large energy barrier. In addition to the chair conformers, pyranoses also have an intermediate "boat" conformer. In the absence of an applied force, the most stable conformation of a pyranose is that of the 4C1 chair. Recent studies using atomic force microscopy (AFM) have shown that application of a force to amylose and pectin polysaccharides drives a conformational change in the pyranose ring which is evident as a sudden elongation of the molecule (Marszalek et al., 1998
, 1999
). This elongation was shown to result from an increase in the distance between glycosidic oxygen atoms caused by a force-induced transition between the chair and boat conformations of the pyranose ring (Marszalek et al., 1998
, 1999
). Here we use single molecule force spectroscopy to examine the mechanical properties of heparin molecules derived either from intact secretory granules or from soluble heparin.
| MATERIALS AND METHODS |
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Heparin
We used two types of heparin: a commercial product (heparin sodium salt from bovine intestinal mucosa, product No. 51536; Sigma, St. Louis, MO) and an isolate from secretory granules of mast cells. Mast cell secretory granules were prepared from beige mice (bgj/bgj strain; Jackson Laboratories, Bar Harbor, ME) following the procedure described by Oberhauser and Fernandez (Oberhauser and Fernandez, 1993
) and in Marszalek et al. (1997a)
. Granules were lysed in pure water, centrifuged, and resuspended in (phosphate-buffered saline (PBS)) buffer whose pH was increased to 11 by the addition of NaOH. This procedure dissociates heparin chains from the protein core of the heparin sulfate proteoglycan. Such dissociated heparin molecules were used, without further purification in AFM pulling experiments. A layer of heparin molecules was created by drying a drop of solution containing either the granular material or commercial heparin (1 mg/ml in PBS) onto glass coverslips followed by extensive rinsing. This procedure leaves for measurements only these molecules that are strongly adsorbed to the glass surface (Li et al., 1998
). AFM stretching measurements werfe carried out in PBS mixed with ethanol (final concentration of ethanol 30%).
Molecular modeling of heparin
The pyranose structures of heparin residues were generated and all calculations were carried out with the program PC Spartan Pro for Windows (v.1.07; Wavefunction, Inc., Irvine, CA) on a PC. First, the molecules were conformationally relaxed with the molecular mechanics method MMFF and then further optimized ab initio (HF/6-31G*). To simulate AFM stretching of pyranose rings with Spartan, the distance between the glycosidic oxygen atoms O1 and O4 was constrained and allowed to increase in steps of
0.05 Å while the geometry of the ring, at each step, was optimized with the semiempirical quantum mechanical method MNDO.
| RESULTS AND DISCUSSION |
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30 nm and
350 nm (Fig. 1 B). The varying contour lengths result either from molecules with different sizes or, most likely, from the random attachment of the AFM tip to the heparin molecule. Regardless of their contour length, all the recordings show a pronounced plateau in the force-extension curve, marking an enthalpic transition at forces above
200 pN. This plateau can be interpreted as an increased extensibility of the molecules. Such an elastic behavior was already observed for several different polysaccharides studied with AFM such as amylose, dextran, and pectin (Li et al., 1999
anomeric residues with axial bonds, which is consistent with the structure of heparin (see Fig. 1A). It is important to note that the force at which heparin molecules display their enthalpic elasticity (F = 201 ± 63 pN; n = 12) coincides with the force at which
-D-glucopyranose residues of amylose flip from their chair to a boatlike conformation (275 ± 45 pN)(Li et al., 1999
200 pN is characteristic and indicative of 1
4 linkages between the pyranose monomers, because other linkages are known to produce plateaus at higher forces. For example, the transition in dextran, whose backbone is primarily formed by 1
6 linkages, occurs at
800 pN (Rief et al., 1997
anomeric residues which are jointed by 1
4 linkages. In Fig. 1 C we plotted the recordings from Fig. 1 B after normalizing the molecules' extension by the molecule end-to-end distance determined at a force of 100 pN. Here, we make use of this property of the freely jointed chain model that guarantees that the chain extension at any given force is proportional to the contour length of the chain (Flory, 1953
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30 nm and up to
400 nm. These recordings also display a pronounced enthalpic elasticity marked as a plateau in the force-extension curve that occurs at around 230 pN (228 ± 53 pN; n = 19). The force-extension curves shown in Fig. 2 A superimpose after normalizing their extensions (Fig. 2 B), confirming that they were obtained from single molecules whose elastic properties scaled linearly with the contour length (Rief et al., 1997
-linked glucans, the enthalpic elasticity of heparin originates in sugar rings which undergo force-induced conformational transitions that lengthen the molecule when placed under a stretching force.
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-L-iduronic acid (IdoA) and
-D-glucosamine (GlcN) residues jointed by the 1
4 linkage. Dimer B consists of 1
4-linked ß-D-glucuronic acid (GlcA) and
-D-GlcN residues (Rao, 1998
80% of dimer A and
20% of dimer B. In addition, heparin has a complex pattern of sulfation (not shown in Fig. 2 A) that typically includes
3 sulfate groups per disaccharide (Faham et al., 1996
Conformational studies on heparin indicate that
-D-GlcN and ß-D-GlcA residues are in the regular 4C1 chair conformation (Rao et al., 1998
). In this conformation, GlcN units have the glycosidic bond in the axial orientation (perpendicular to the plane of the pyranose ring) and the aglycone bond in the equatorial orientation (in the plane of the ring). In ß-D-GlcA units, both the glycosidic and the aglycone bonds are in the equatorial orientation. We depicted the
-L-IdoA residue in the 1C4 inverted chair conformation. However, reliable information on the ground-state conformation of this residue, in a free (not bound) heparin molecule, is not available. There is an ongoing controversy surrounding the predominant conformation of IdoA residues in solution (Faham et al., 1996
; and Rao et al., 1995
; Ernst et al., 1998
; and Ferro et al., 1986
). If IdoA residues are in the 1C4 conformation, as we assume here, then both the glycosidic and the aglycone bonds on this residue are in the axial orientation.
Our earlier force spectroscopy studies on several
-D-glucans and
-D-galactans showed that forced conformational transitions in those polysaccharides are induced by axial linkages that work as atomic levers to generate torque and flip the pyranose rings from the chair to a boatlike or inverted chair conformation (Marszalek et al., 1999
). These conformational changes increase the separation of the glycosidic oxygen atoms and therefore are favored in polysaccharide chains subjected to mechanical stretching (Marszalek et al., 2001
, 2002
, 1998
, 1999
). We also showed that polysaccharides with equatorial linkages, such as cellulose, do not undergo force-induced conformational transitions upon stretching because these linkages generate minimal torque on the pyranose ring and also provide a maximal separation of the glycosidic oxygen atoms in the ground energy conformation (typically 4C1). Force-extension curves obtained from polysaccharide molecules such as cellulose, that do not change conformation under a stretching force, are well described by classical models such as the freely jointed chain model of polymer elasticity (FJC). For an FJC polysaccharide, the main mechanism of extension involves aligning the sugar rings with the direction of the force (reducing its entropy) with a minimal enthalpic component resulting from the deformation of covalent bonds. By contrast, the force-extension curves of polysaccharide molecules such as dextran or amylose deviate substantially from the FJC model due to the force-driven conformational changes of their pyranose rings (e.g., Marszalek et al., 1998
, 1999
).
The analysis of heparin structure carried out above suggests that the enthalpic elasticity captured in the force-extension recordings of heparin originates from conformational transitions within
-D-GlcN and
-L-IdoA units because these residues provide axial linkages in their ground energy conformations. In Fig. 3 we examine in detail conformations of heparin residues before and after subjecting them to stretching forces using the molecular mechanics approach. Fig. 3, AD, shows ab initio minimized (HF/6-31G* level) conformers of IdoA, GlcN, and GlcA residues. These conformers were subjected to a stretching procedure where the distance between the glycosidic oxygen atoms was constrained and allowed to increase in small steps (<0.05 Å) while the geometry of the molecule was optimized at each step with a semiempirical method, MNDO. Fig. 3 B shows that an IdoA residue subjected to the stretching along the line connecting the glycosidic oxygen atoms O1 and O4 flips from the inverted chair conformation 1C4 to the 4C1 chair conformation. This conformational transition increases the O1O4 distance from 4.682 Å to 5.428 Å, which amounts to
16% of the initial separation. Fig. 3 C shows that a GlcN residue subjected to a similar procedure flips from the 4C1 chair conformation to a skew-boat conformation, and this transition increases the O1O4 distance from 4.659 Å to 5.566 Å or by
19%. Fig. 3 D shows that a GlcA residue subjected to stretching forces will remain in the 4C1 conformation and the O1O4 distance will increase by a negligible amount. Assuming that a hypothetical heparin chain is composed of 80% of dimer A and 20% of dimer B, we estimate the total increase in the length of the chain, as a result of conformational transitions in GlcN and IdoA residues, to be 15.8%. In Fig. 4 we show an example of the force-extension recording of a heparin molecule from the commercial sample, together with the fits of the FJC model to the data before and after the enthalpic extension. This allows us to measure the increase in the contour length of the molecule due to the conformational transitions in the IdoA and GlcN residues. We find that this increase amounts to 14.4 ± 3% (n = 19). We conclude that the experimental value agrees, within the limit of experimental uncertainty, with the theoretical estimate. Similarly, we measured the increase in the contour length of native heparin molecules upon stretching to be 11.6 ± 3.1% (n = 12). This value is lower than the theoretical estimate, and it is possible that this difference may reflect a higher percentage of GlcA in native heparin as compared to commercial heparin and to the idealized structure shown in Fig. 2.
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First, we examine the forces generated upon swelling of the proteoglycan matrix (Fig. 5, A and B). We note that, when examined in vitro, the exocytosed matrices remain condensed for weeks and do not dissolve in the extracellular medium. We also note that to dissolve a proteoglycan matrix, the linkage between heparin chains and the core protein must be cut. These observations suggest that the proteoglycan gel is a cross-linked molecular network (Fig. 5, C). It is not known if this cross-linking between heparin chains and proteins is chemical in nature or if it involves physical entanglements of individual heparin polymers. Regardless of the nature of this cross-linking, it must be strong enough to enable the matrix to withstand the large stretching forces that occur upon swelling. A force that a swelling matrix can exert was directly measured, and the associated swelling pressure was determined to be
12 bar (Nanavati and Fernandez, 1993
). On the other hand, we know that the matrix is only weakly cross-linked because large molecules such as concanavalin A (
5 nm in length) can easily penetrate it (Oberhauser and Fernandez, unpublished observation). In addition, AFM measurements of the elastic modulus of the matrix confirmed that the matrix behaves as a weakly cross-linked ion exchanger (Parpura and Fernandez, 1996
). We therefore assume that in the swollen matrix there is a single heparin molecule per
100 nm2 of the granule surface and that such a molecule is attached to the matrix at two points at least, and therefore is subjected to tensile forces upon swelling of the matrix (see Fig. 5 D). Then, a pressure of 12 bar corresponds to a stretching force of 120 pN per single heparin molecule. From this rough estimate we clearly see that the forces within the swollen matrix are of such a magnitude that they can affect the conformation of pyranose rings in heparin. Hence, it is likely that during exocytosis the sugar residues of heparin undergo force-induced conformational transitions. It is therefore possible that these conformational transitions have biological significance in regulating release of many molecules that are bound to heparin. In Fig. 4 we describe the mechanism of release that, in addition to ion exchange (Marszalek et al., 1996
, 1997a
,b
), now also includes conformational transitions as the driving force for release of uncharged ligands. In contrast to charged amines which are small molecules that interact with localized charges on heparin, proteins are large, and their binding to heparin may be coordinated by hydroxyls or other functional groups on several sugar rings in a conformation dependent manner. In Fig. 5, C and D, we illustrate this situation by assuming that before exocytosis, the binding of a protein ligand is coordinated by a dimer of IdoA and GlcN residues. In the relaxed state of heparin these sugars are in their ground energy conformations (1C4 and 4C1, respectively) which assure a high affinity for the binding of the ligand molecule. Upon exocytotic swelling of the matrix, the stretching forces flip the IdoA residue to the 4C1 conformation and the GlcN residue to a boatlike conformation. In this extended state, the distance between the putative binding sites on the dimer increases significantly, the binding affinity decreases dramatically, and the ligand molecule is allowed to diffuse out of the matrix (Fig. 5 D).
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250 pN (Oberhauser et al., 2002
A specific heparin pentasaccharide sequence is known to bind to 13F3 with very high affinity (10-8 M). We hypothesize that the high binding affinity is dependent on the orientation of the sulfate and carboxylate groups, which hydrogen bond to the charged amino acids in the 13F3 module (Hricovini et al., 1999
). If a force-driven conformational change were to occur in heparin, the spatial arrangement of the sulfate and carboxylate groups will change dramatically, altering the binding affinity of heparin for 13F3.
Conclusions
Using single molecule force spectroscopy techniques, we showed that the elasticity of heparin molecules have a large enthalpic component that occurs at a stretching force of
230 pN. We determined that this enthalpic elasticity represents force-induced conformational transitions in GlcN and IdoA sugar residues. We estimated that forces stretching the proteoglycan matrix of secretory granules or the extracellular matrix are capable of inducing similar conformational transitions in heparin molecules in vivo. We hypothesize that these conformational transitions in heparin and similar conformational transitions in other glycosaminoglycans control ligand binding affinity during exocytotic release and during interactions between migrating cells and the extracellular matrix.
| ACKNOWLEDGEMENTS |
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Submitted on March 30, 2003; accepted for publication June 25, 2003.
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