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* Istituto di Biofisica, Consiglio Nazionale delle Ricerche, Sezione di Genova, Genova, Italy and
Dipartimento di Biologia, Universita' di Padova, Padova, Italy
Correspondence: Address reprint requests to Franco Gambale, Istituto di Biofisica, Via De Marini 6, 16149 Genova, Italy. Tel.: 39-010-647-5550; Fax: 39-010-647-5500; E-mail: gambale{at}area.ge.cnr.it.
| ABSTRACT |
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| INTRODUCTION |
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On the other hand, the improvement of plant performances by modification of specific molecular transport mechanisms may be of primary importance for the success of phytoremediation, an emerging environmentally friendly technique which uses metal-tolerant plants as solar-driven pumps to decontaminate soils and waters polluted by heavy metals. The relief of metal inhibition of ionic channels involved in mineral nutrition might be part of a winning strategy to select plants that are tolerant to heavy metals.
Heavy metals can also be used as tools to investigate the biophysical properties of ion channels. Indeed, interactions of metals with specific amino acids, their interactions with ions permeating within the pore, as well as metal competition with physiological divalent ions (such as Ca2+ and Mg2+) may provide useful information regarding the structure of the pore as well as on channel modulation by chemicophysical parameters and physiological compounds.
These reasons suggest it is useful to investigate the basic biophysical mechanisms affecting nutrient absorption and redistribution in plants, verifying whether metals affect the properties of classical permeation pathways.
We previously characterized (Paganetto et al., 2001
) the biophysical properties of KDCl, a potassium channel cloned from carrot roots (K+ Daucus carota 1) (Downey et al., 2000
). This clone does not express functional channels when injected alone in Xenopus laevis oocytes but expresses functional channels when coinjected in oocytes (Paganetto et al., 2001
) together with KAT1 (potassium Arabidopsis thaliana 1) (Schachtman et al., 1992
). KDC1 participates in the formation of channels that show peculiar properties in response to heavy metals: the current mediated by the KDC1:KAT1 channel was not inhibited (as occurs in other plant channels investigated so far) (Hoth and Hedrich, 1999
; Paganetto et al., 2001
) but, on the contrary, it was increased with the addition of Zn2+ to the bath solution.
On the basis of these considerations, we decided to investigate further the molecular mechanisms responsible for KDC1 modulation by zinc and other heavy metals. As potential binding sites responsible for KDCl response to metals, here we investigate in detail the role played by the two-histidines pairs (Fig. 1 A), located in the S3S4 and S5S6 linkers of the proteins.
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| MATERIALS AND METHODS |
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Injection of RNA in oocytes
Xenopus laevis oocytes were isolated (Hedrich et al., 1995
) and injected with KDC1 and KAT1 mRNA (0.5 µg/µl) using a Drummond Nanoject microinjector (2550-nl/oocyte; Drummond Scientific, Broomall, PA). RNA concentration was quantified spectroscopically. All the experiments shown were performed using a single batch of the two RNAs (KDC1 and KAT1); however, similar results were also obtained using other KDC1 samples. Current recordings were made 26 days after injection. KDC1 and KAT1 (or KAT1 mutants) were simultaneously injected in the weight ratio of 1:1. We verified that oocytes, injected with KAT1 and a volume of distilled water identical to that used to coinject KDC1, did not show changes of the KAT1 channel properties (Véry et al., 1994
).
Voltage-clamp recordings
Whole cell K+ currents were measured with a two-microelectrode homemade voltage-clamp amplifier (designed by F. Conti), using 0.2-0.4 Mohm electrodes filled with 3 M KCl. The following bath standard solution was used (in mM): 100 KCl, 2 MgCl2, 1 CaCl2, 10 MES/TRIS, pH 5.6, or HEPES for pH 7.6 for the experiments on different pH. Unless otherwise indicated all the experiments were performed at pH 5.6. Various concentrations of different metals were added as metal-chloride salts. Currents were typically filtered with a cutoff frequency of 1 kHz before acquisition. Unless otherwise indicated each data point represents the mean ± SE obtained from at least three different experiments. The relative open probability was obtained dividing the steady-state currents by (VVrev), normalized to the saturation value of the calculated Boltzmann distribution.
| RESULTS |
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-helices S3S4 (H161,H162) and S5S6 (H224,H225) (Fig. 1 A). Moreover, in the KDC1 pore, a tyrosine (Y269) residue substitutes the histidine characterizing all other plant inward-rectifying potassium channels (for a review, see Czempinski et al., 1999
Before investigating the role of these histidines in zinc potentiation, we verified the participation of KDC1 to heteromeric channels. The coinjection of mRNA expressing different potassium channels may result in the formation of heteromeric channels comprising a combination of a variable number of subunits which are presumably arranged according to different structural combinations and symmetries (Naranjo, 1997
). To evaluate both the effects of this variability and the interactions of KDC1-histidines belonging to different KDC1 subunits, we constructed a mRNA tandem that expresses a KDC1 subunit covalently linked to a KAT1 subunit. When injected in oocytes this construct expresses a functional channel which in the following is indicated with the term (KDC1-KAT1) heterodimer or simply dimer. It is reasonable to assume that this construct leads to the expression of a single, uniform population of channels, each one containing two KDC1 subunits alternating with two KAT1 subunits, arranged as schematized in Fig. 2 A (right) (for detail and description on dimer arrangement see Experimental Procedures in Heginbotham and MacKinnon, 1992
). The currents mediated by the dimeric channel can be compared with those recorded when oocytes were injected with KDC1 and KAT1 at a 1:1 weight ratio (Fig. 2 B). It can be observed that the two channels display very similar Boltzmann characteristics (Fig. 2 C). This confirms that when KDC1 and KAT1 are coinjected at a 1:1 weight ratio the majority of heteromers presumably comprise two KDC1 and two KAT1 subunits. Besides showing the same characteristics in control conditions, the dimeric channels also displayed a sensitivity to Zn2+ comparable to that exhibited by the coinjected channels. Fig. 3 A shows the typical current recorded in oocytes expressing the (KDC1-KAT1) dimer with the addition of two extracellular concentrations of zinc (0.1 mM and 1 mM) in response to a hyperpolarizing pulse to -150 mV from a holding potential of 0 mV: a reversible zinc potentiation comparable to that already recorded on KDC1:KAT1 channels can be observed. The dose-response curves for both channels are shown in Fig. 3 B. The ratio between the steady state of the current in the presence and in the absence of Zn2+ (IZn/IControl) and the open probabilities of the two types of channels in the presence of 1 mM Zn2+ did not show appreciable differences (Fig. 3 C). As the heteromeric and dimeric channels display similar properties in all the experiments performed, for the sake of simplicity in the following we refer to coexpressed channels, comparing occasionally these results with those performed on the dimer adopted as a control system which guarantees the presence of two KDC1 subunits per channel.
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Fig. 5 shows the macroscopic currents measured in the KDC1:KAT1 channels when the histidines in the S5S6 linker, facing the extraplasmatic side of KDC1 channel, were mutated into alanines. Both the single mutations H224A (Fig. 5 A) or H225A (Fig. 5 B) as well as the double mutation (H224A,H225A) (Fig. 5 C) gave rise to the formation of functional channels that displayed the typical basic properties conferred to heteromeric channels by KDC1: i.e., like the wild-type KDC1:KAT1, the mutated channels also displayed a threshold of activation shifted toward more negative membrane potentials (for example, Fig. 5 G illustrates the shift determined by H224A) and slow activation times which appeared to be dependent on the mutation (Figs. 5 and 6). Interestingly, the activation time constants of mutated channels were always slower than the times of homomeric KAT1 channels in similar conditions and in one case (H225A:KAT1) even slower than the wild-type (compare the kinetics of traces in Fig. 5 B with those in Fig. 1, B and C). These differences provide further support to the hypothesis that these currents are not due to a loss of function of the channel comprising one or more mutant subunits but to functional channels comprising mutated KDC1.
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Mutations in the histidines in the S3S4 linker were less effective than those in the S5S6 linker. In fact, mutation H161A did not induce significant modifications in zinc modulation (Fig. 6 A). Like H161A, the mutation H162A also did not abolish the Zn2+-potentiation of the current (Fig. 6 B). Current potentiation in this case was similar to that observed in the wild-type channel (compare the potentiations in Figs. 5 F and 6 F) and larger than that observed in the H161A mutant (Fig. 6 F). It was necessary to mutate both the histidines in the S3S4 linker (H161A,H162A) to abolish current potentiation, and to obtain a current inhibition (Fig. 6 C); this inhibition reached almost 50% of the control current when Zn2+ was raised to 5 mM (Fig. 6 E). Note that the kinetics of current activation as well as the zinc effects are entirely comparable in the double mutant dimeric and heteromultimeric channels (Fig. 6, C and D).
Finally, we investigated the effects induced by other heavy metals on both wild-type and mutated channels. Fig. 7 A shows the effects induced on (KDC1-KAT1) dimeric currents by 1 mM Zn2+, Pb2+, Cd2+, and Ni2+. Like for Zn2+ (Fig. 5, E and F, and Fig. 6, E and F), the other metals also determine effects which are dependent on metal concentrations (not shown).
It is important to note that, also in this case, the heteromeric and the dimeric channels displayed similar behavior with the addition of all metals (Fig. 7, BE): namely Zn2+ (Fig. 7 B) and Pb2+ (Fig. 7 C) induced a significant potentiation of the current, whereas Cd2+ (Fig. 7 E) only induced a small increase. On the other hand, Ni2+ (Fig. 7 D) determined a slight decrease of the current which was smaller than the significant inhibition induced by this metal on the homomeric KAT1 channel.
It can be observed that although the single mutation H224A completely abolishes the Zn2+-potentiation of the current, it does not completely remove Pb2+- and Cd2+-potentiation (Fig. 7, C and E), and the Ni2+-inhibition of the current mediated by this mutant is similar to that observed in homomeric KAT1 channels. Also, the double mutations (H161A,H162A) and (H224A,H225A) that abolished the potentiation mediated by Zn2+ did not completely abolish the current potentiation elicited by Pb2+. Instead, these two double mutations completely eliminated the relief of current inhibition introduced by KDC1 in the presence of Ni2+.
As in the case of Zn2+, mutation H225A had minor consequences both on Pb2+- and Cd2+-potentiation and on the inhibition of the current after the addition of Ni2+. Similarly, the two single mutations H161A and H162A had only small consequences on current potentiation mediated by Pb2+ as well as on the current inhibition induced by Ni2+. Surprisingly, H162A, but not H161A, significantly reduced the slight potentiation induced by Cd2+.
As it is well known that DEPC (diethylpyrocarbonate), a histidine-specific reagent, irreversibly binds to imidazole rings of histidines (Chakrabarti, 1990
; De Biasi et al., 1993
) preventing zinc-binding and protonation, we verified (not shown) that perfusing Xenopus oocytes with 1 mM DEPC determined a rapid and irreversible decrease of the heteromultimeric current that decreased in a few seconds to almost 20% of its initial value. However, DEPC also determined a slower and irreversible decrease of the homomeric KAT1 currents. Interestingly, whereas the residual KAT1 current was further inhibited by the addition of 1 mM zinc, the residual KDC1:KAT1 current was unaffected by zinc. This suggests that DEPC irreversibly binds to residues, like external histidines, responsible for Zn2+-potentiation, therefore preventing the subsequent binding of the metal.
| DISCUSSION |
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In this article we try to answer two important questions: how KDC1 combines with KAT1 to form a tetrameric structure, and whether the different histidine composition of KDC1 with respect to other plant inward-rectifying channels plays an important role in conferring zinc tolerance to the coexpressed channel. Indeed, although KDC1 has two couples of histidines in the S3S4 and S5S6 linkers, it lacks the well-conserved histidine (replaced by a tyrosine, Y269) present in the permeation pore of all other plant inward-rectifying potassium channels.
Dimeric construct
The formation of heteromeric channels and the important role played by these two histidine pairs was investigated and supported by the robust current expression observed in oocytes injected with the dimeric KDC1-KAT1 tandem construct which displayed characteristics almost identical to those of the coinjected KDC1:KAT1 channels (Fig. 2 C) as well as the same sensitivity to metal ions (Fig. 7). It is reasonable to assume that potassium channels formed by the KDC1-KAT1 tandem are based on alternating KDC1 and KAT1 subunits (Heginbotham and MacKinnon, 1992
). Under this hypothesis, in these channels each KDC1 subunit interacts with two KAT1 subunits; this suggests that the interaction of histidines belonging to two different KDC1 subunits is not needed to mediate the interaction with zinc and the subsequent current potentiation.
pH dependence
In accordance with the pH dependence of monomeric KAT1 and KDC1 expressed in cultured cells (Downey et al., 2000
), we found that lowering the extracellular pH from 7.6 to 5.6 induced a 10-fold increase in the current. Interestingly, at neutral pH, zinc potentiation of the current was even larger than at acidic pH (threefold with respect to the 1.8-fold at pH 5.6, see Table 1). The fact that the pKa of histidine in proteins ranges from 5.0 to 8.0 (with respect to a pKa = 6.0 of free histidines) (Clyne et al., 2002
) supports the histidines as obvious candidates for proton-binding sites involved in the pH-dependent potentiation of the current (Hoth et al., 1997
, Hoth and Hedrich, 1999
). Moreover, the lower Zn-potentiation of the dimeric current observed at acidic pH suggests that protons and zinc possibly act at the same binding site. The different potentiation of the current with acidification (
threefold for KAT1 channel instead of the 10-fold for dimeric channel) could possibly be ascribed not only to the different composition of external histidines in the two channels but also to some differences in the pore region, which were shown to be crucial for H+ binding (Hoth et al., 2001
). Future experiments on mutant dimeric channels will help to identify the amino acids important in this process. Similar to what was observed in KAT1 and KST1, the current of heteromeric channels that contain KDC1 increases with the external pH, suggesting that parts of the pore segments crucial for pH modulation are conserved in these three channels (Hoth et al., 2001
).
Zn2+-potentiation
It has been demonstrated that histidine residues are also responsible for Zn2+-modulation of the current amplitude (either inhibition or potentiation) in several ion channels (Choi and Lipton, 1999
; Clyne et al., 2002
; Hoth et al., 1997
; Wang et al., 1995
). Specifically, the inhibition of the current induced by zinc in other plant inward-rectifying channels has already been ascribed to zinc-binding to histidine present in the permeation pore, like H271 in KST1 (Hoth and Hedrich, 1999
) or H267 in KAT1 (Paganetto et al., 2001
).
Therefore, we hypothesize that the zinc potentiation of our KDC1:KAT1 channel might depend on two concurrent mechanisms: namely, 1), a relief of current inhibition owing to the absence of the histidine in the pore region of KDC1, and 2), an increase of the current due to zinc-binding to the histidine couples accessible at the extracellular side at the S3S4 and the S5S6 linkers. Indeed, it has been demonstrated that bidentate binding sites, comprising from two to six residues, represent the major protein binding sites for Zn2+. These binding sites frequently involve histidine and/or other residues like cysteine, aspartate, or glutamate (Choi and Lipton, 1999
; Vallee and Falchuck, 1993
). Interestingly, two glutamates (E159 and E164) symmetrically flank histidines H161H162 in the S3S4 linker and another glutamate, E229, is present near histidines H224H225 at the S5S6 linker.
Investigating the role played by the two pairs of histidines in zinc potentiation, we found that histidine 224 plays a crucial role in the interaction between zinc and the channel as the substitution of H224 with an alanine was sufficient to abolish the potentiation of the current elicited by Zn2+. Interestingly, the single mutation H225A only slightly affected zinc potentiation of the current. The simultaneous mutation of the two histidines H224 and H225 reinforced the effects induced by the single H224A mutation as the double mutant displayed a more pronounced inhibition of the current with the addition of Zn2+. The deduced Hill coefficients did not change appreciably in the two Zn2+ inhibition curves, being respectively 0.4 and 0.5 for the single H224A and double (H224A,H225A) mutant. This suggests that both in the single and double mutants the binding of only one Zn2+ ion is sufficient to inhibit the current. This binding site, responsible for current inhibition, could be identified with the histidine conferred to the inner pore by each KAT1 subunit participating in channel formation. Accordingly, when the histidine residues were changed in the pore region of the KDC1:KAT1 channels, replacing the KDC1 tyrosine at position 269 with a histidine (Y269H), the current was still enhanced by zinc (Fig. 5 F); this indicates that the KAT1-histidine in the pore region is not involved in the current potentiation induced by zinc. On the contrary, as already proposed (Hoth and Hedrich, 1999
; Paganetto et al., 2001
), our results are compatible with the hypothesis that the pore histidines are responsible for the inhibition of the current mediated by zinc when the groups responsible for current potentiation are mutated into alanines and potentiation is abolished.
In the histidine pair at the S3S4 linker, whereas the single mutations H161A and H162A did not significantly affect Zn2+-potentiation of the current, the simultaneous mutation of both histidines (H161A, H162A) determined effects comparable to those induced by H224A, i.e., this double mutation also completely abolished the Zn2+-potentiation of the current. Zinc-binding to H161 and H162 is also compatible with the structure recently proposed for potassium voltage-dependent channels (Jiang et al., 2003
), as, according to this model, in the open state the S3S4 linker is exposed to the external solution and therefore can interact with molecules present in the extracellular solution. However, to verify a state-dependence of zinc-binding is beyond the objectives of this work.
Zinc "tolerance" conferred by KDC1 to the heteromeric channel cannot be simply emulated by introducing similar mutations in KAT1, as the introduction of two histidines in the KAT1 S5S6 linker, at positions corresponding to H224 and H225 in KDC1, did not give rise to the expression of functional channels in Xenopus oocytes (not shown). Indeed, the different effects induced by the mutations introduced in KDC1 suggest that Zn2+-potentiation of the current is a finely tuned mechanism where zinc interacts with both histidine pairs and which presumably depends on the structure and organization of the entire subunit or channel. We can also speculate that possibly in the H161H162 a double mutation is needed to abolish Zn2+-potentiation as the two glutamates possibly support the interaction of the histidine cleft. The second pair being supported by only one glutamate is more sensitive to single histidine mutations like H224A.
Other metals
To investigate whether current potentiation is a property that can be observed also with the addition of other heavy metals, we compared the effects induced by Ni2+, Pb2+, and Cd2+ with those induced by Zn2+ on wild-type and mutated channels. All these metals decreased the current mediated by the KAT1 channel and affected at different levels the currents in oocytes coinjected with the wild-type KDC1 and KAT1.
Surprisingly, whereas Cd2+ induced only a small potentiation of the KDC1:KAT1 current, lead induced a current potentiation which resulted to be even greater than that observed with the addition of Zn2+. Contrary to Zn2+, Pb2+-potentiation of the current was only partially abolished by the mutations introduced in the two histidine pairs, whereas Cd2+ induced a modest current potentiation, which was not particularly sensitive to the mutations introduced in the four histidines, suggesting the importance of other amino acids as binding sites of these two metals.
The behavior of channels in the presence of Ni2+ is particularly interesting. Ni2+, which also react strongly with histidines (Gordon and Zagotta, 1995
; Maroney, 1999
), decreased the current of both wild-type and mutant KDC1:KAT1 channels, but shows a profile (in Fig. 7 D) very similar to that of Zn2+. The presence of KDC1 resulted in a decrease of the current inhibition (Ni2+-relief) which was abolished by the same mutations which removed zinc potentiation. Indeed, in the presence of nickel, the inhibition of the current was maximum in KAT1 and in heteromeric channels comprising H224A, (H224A,H225A), and (H161A,H162A) mutants. This suggests that, in the case of Ni2+, between the two mechanisms already hypothesized to explain zinc effects, the machinery responsible for the current increase (ascribed to external histidines) gives a minor contribution, if any, with respect to that responsible for the relief of current inhibition (ascribed to the absence of the histidine in the pore).
Finally, the comparison of measurements performed on different metals also confirms that current potentiation cannot be ascribed to nonspecific electrostatic interactions of zinc and other charged divalent ions with the lipid and/or protein negative charges. Actually Zn2+-potentiation of the current might be ascribed to different mechanisms such as 1), a shift of the open probability of the channel which affects either the gating charges or the channel activation threshold; 2), an increase of the single channel conductance; and 3), a recruitment of silent channels from a nonconducting pool. One can exclude the first possibility, as zinc only slightly affects the normalized G(V), as shown in the inset in Fig. 1 D. Instead, zinc determines an increase of the absolute conductance (Fig. 1 D) which depends on Zn2+ concentration. The significant increase of the macroscopic conductance (e.g., fourfold in Fig. 1 D) cannot be ascribed to a correspondent increase of the single channel conductance as demonstrated by preliminary single channel experiments performed on the KDC1-KAT1 dimer showing that the single channel conductance does not change appreciably; on the contrary the time spent by the channel(s) in the open state visibly increases in the presence of Zn2+ (Fig. 8). Therefore, the hypothesis of a recruitment of silent channels from a pool of nonconducting channels seems to be the more realistic possibility. A confirmation will possibly come from detailed single channel analysis to be performed on single channel experiments like those shown in Fig. 8.
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| CONCLUSION |
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We have recently demonstrated that KDC1 also expresses functional channels when coinjected in oocytes with other carrot channels (Formentin et al., 2003
). Preliminary results, showing that KDC1 confers on these heteromeric channels properties that are very similar to those conferred on KAT1, support the hypothesis of a functional modulatory role of KDC1 in potassium transport in vivo. Indeed, KDC1 is homologous to AtKC1, which is expressed in Arabidopsis thaliana root hairs as an integral functional K+ selective channel (Pilot et al., 2003
; Ivashikina et al., 2001
; Reintanz, 2002
). Moreover, AtKC1 seems to participate in the formation of heteromeric channels as an
-subunit which alters some critical functions of K+ potassium channels in root hair cells (Reintanz, 2002
). As it has been suggested that heteromultimeric assembly of
-subunits might provide the molecular basis for the functional diversity of potassium channels observed in vivo, one can argue that in carrots, KDC1 might play a role similar to that of AtKC1 in A. thaliana. Indeed, besides conferring its peculiar sensitivity to metal ions, KDC1 shifts the activation threshold of heteromeric inward potassium channels toward more negative membrane potentials, whereas selectivity to potassium ions remains practically unchanged (Paganetto et al., 2001
). One can observe that this shift of the activation threshold is consistent with the positive shift of the threshold observed in Atkc1 knockout plants and might possibly contribute to modulating the influx of potassium ions at the root level and in other tissues where KDC1 is expressed.
It is tempting to speculate that in the future it could be possible to identify channel genes homologous to KDC1 in plants tolerant to heavy metals. In the roots of these plants potassium assumption, instead of being depleted, could possibly be increased by large concentrations of metals like zinc and nickel. Moreover, as Arabidopsis adaptation to K+ starvation and salt stress seems to induce mainly an increase in the expression of AtKC1 in leaf peripheral tissues, one could investigate whether KDC1 participation in tetrameric potassium channels contributes to raising resistance to salt stress through an increased or unaltered assumption of potassium in salty soils (Pilot et al., 2003
).
| ACKNOWLEDGEMENTS |
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This work was supported by the Ministero Dell'Istruzione Universitá e Ricerca, fondi per gli Investimenti Della Ricerca di Base, Project N-RBAUO183A9.
| FOOTNOTES |
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Submitted on July 22, 2003; accepted for publication October 2, 2003.
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L. Yu, D. Becker, H. Levi, M. Moshelion, R. Hedrich, I. Lotan, A. Moran, U. Pick, L. Naveh, Y. Libal, et al. Phosphorylation of SPICK2, an AKT2 channel homologue from Samanea motor cells J. Exp. Bot., November 1, 2006; 57(14): 3583 - 3594. [Abstract] [Full Text] [PDF] |
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