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Department of Biophysical Chemistry, Umeå University, Umeå, Sweden
Correspondence: Address reprint requests to G. Orädd, Tel.: 46-90-786-5367; E-mail: greger.oradd{at}chem.umu.se.
| ABSTRACT |
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| INTRODUCTION |
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Restricted diffusion due to obstacles of gel phase domains has been observed across the gel/liquid crystalline two-phase region with fluorescence recovery after photobleaching (FRAP) (Almeida et al., 1992a
), 2H two-dimensional exchange, and fringe-field nuclear magnetic resonance (NMR) spectroscopy (Dolainsky et al., 1997
). Domains have also been directly visualized by atomic force microscopy in systems with phosphatidylcholine, sphingomyelin, and cholesterol (Rinia et al., 2001
) as well as in model membranes containing small peptides (Rinia et al., 2002
, 2000
).
In systems of gramicidin A (gA) mixed with dipalmitoylphosphatidylcholine (DPPC) or dimyristoylphosphatidylcholine (DMPC) striated domains have been observed below the gel-to-liquid crystalline phase transition temperature (Ivanova et al., 2003
; Mou et al., 1996
). Similar structures have also been observed for synthetic peptides in phosphatidylcholine membranes (Rinia et al., 2002
, 2000
). In the model proposed from these investigations the highly ordered patterns observed are believed to consist of linear aggregates of the peptide surrounded by layers of lipids in a fluid state. These structures would severely restrict the lipid translational motion, and the lipid lateral diffusion coefficient would thus be sensitive to the presence of such aggregates in the lipid bilayer. We have used the pulsed field gradient NMR method (Lindblom and Orädd, 1994
) to investigate the influence of gramicidin D (gD) on the lipid lateral diffusion of DMPC in fully hydrated bilayers with 15 mol % gD.
| MATERIALS AND METHODS |
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85% gA (Killian, 1992
DSC
Measurements were performed on a MicroCal VP-DCS MicroCalorimeter (Taby, Sweden). Samples for the DSC measurements were prepared by mixing appropriate amounts of DMPC and gD in methanol, followed by evaporation of the solvent. The dry mixtures were hydrated to obtain 2 mg dry material/mL H2O and thoroughly mixed in a vortex stirrer. The samples were treated with at least five freeze-thaw cycles to obtain a homogenous hydration of the lipid bilayers. DSC thermograms were obtained in heating scans from 0 to 45°C with a heating rate of 25°C/h. Four temperature scans were recorded, where the first scan was discarded to obtain a common thermal history of all samples. The appearance of the following scans were always identical.
NMR
31P-NMR spectra were recorded at 162.13 MHz on a Varian/Chemagnetics CMX Infinity spectrometer (Fort Collins, CO) using the Hahn echo sequence with WALTZ-decoupling of the protons (Shaka et al., 1983
). The 1024 scans were collected with a recycle time of 1 s and the spectra were Fourier-transformed after a 200-Hz line broadening.
Macroscopically oriented bilayers were prepared as follows. Lipids dissolved in a 1:4 mixture of methanol:1-propanol was deposited onto thoroughly cleaned, but otherwise untreated, glass plates (14 x 2.5 mm2, Marienfeldt, Darmstadt, Germany) to a sample mass of
4 µg/mm2. The solvent was evaporated and the plates were placed into high vacuum for at least 4 h to remove traces of solvent. The choice of solvent mixture gives a good adhesion to the glass surface and results in thin films covering the glass plates. Thirty-five plates were then stacked on top of each other and placed into a glass tube with a 2.5 x 2.5 mm2 square cross section.
The tube was placed in a humid atmosphere at 35°C for a minimum of seven days. During this time the lipids became hydrated, and oriented bilayers were formed. Finally, an extra supply of water was added to the test tube, which was then sealed at both ends with wax. The sample was then left another day or two for a final equilibration. This procedure allowed a large part of the sample to be oriented with the bilayers parallel to the glass plates, as determined by 31P NMR.
The oriented sample was placed with its long axis horizontally into a Varian/Chemagnetics PFG-diffusion 1H/BB probe, where a goniometer stage permitted the sample to be rotated along its long axis (Orädd and Lindblom, 2004
). A heated air stream passing over the sample controlled the temperature to within ±0.2°C. The sample was oriented with the bilayer normal at an angle of 54.7° by optimizing the proton signal with respect to the line width. At this so-called "magic angle" the dipole broadening of the protons is zero, and the signal from the oriented bilayers then becomes apparently isotropic (Lindblom and Orädd, 1994
; Orädd and Lindblom, 2004
).
The PFG-NMR diffusion experiments were performed at 400.51 MHz on a Varian/Chemagnetics CMX Infinity spectrometer with the stimulated spin-echo technique (Tanner, 1970
). The pulse sequence timing is (90-
-90-T-90-
-acquire) with the gradient pulses, of length
(3 ms) and strength g (09 T/m), following immediately after the first and the third 90° RF pulses. In a diffusion experiment typically 20 spectra were recorded with 16 scans/spectrum and a recycle time of 2 s, in which g was varied, keeping all the other parameters constant. The diffusion coefficient, D, was then determined from a nonlinear fit of the signal attenuation of the lipid peaks to the equation of Stejskal and Tanner (1965)
,
![]() | (1) |
is the gyromagnetic ratio, and
is the separation between the two gradient pulses. The experiment was repeated at least three times, in which
was varied between 10 and 500 ms. No variation of the obtained diffusion coefficient on
was observed. Finally, to obtain the lateral diffusion coefficient, DL, the observed diffusion coefficients were multiplied by a factor of 1.5, since diffusion along the z axis is measured while the translational motion actually occurs along the bilayers oriented at the magic angle. Thus, the square of the effective gradient will be
and the diffusion coefficient obtained is multiplied by a factor of 1.5 to obtain the lateral diffusion coefficient, DL = 1.5 x D (Lindblom and Orädd, 1994| RESULTS |
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Lateral diffusion
Fig. 3 shows Arrhenius plots of the temperature dependence of DL for various values of Xg and for decreasing temperatures from 35°C. The low temperature limit for each sample is governed by the disappearance of the proton signal. The obtained DL values are in good agreement with results obtained by FRAP on lipid fluorescence probes in bilayers of DMPC (Almeida et al., 1992b
) and for DMPC bilayers containing gramicidin C (Tank et al., 1982
). There is also reasonable agreement with 2H and 31P two-dimensional exchange experiments on DMPC bilayers, especially at lower temperatures (Dolainsky et al., 1997
; Fenske and Jarrell, 1991
). The high temperature behavior is of the Arrhenius type with an apparent activation energy of
50 kJ/mol, independent of gD additions up to 5 mol %, indicated by the straight lines in the figure. This is larger than values reported earlier for DMPC/water (Almeida et al., 1992b
; Dolainsky et al., 1997
; Filippov et al., 2004
), and the reason for this seems to be due to a slight curvature of the line at lower temperatures. The values in this work are calculated for temperatures <35°C, whereas the other reported values were calculated for a larger temperature span. A possible reason can be the presence of small amounts of impurities and lipid breakdown products that can broaden the transition. Careful inspection of the trace for Xg = 0 in Fig. 1 reveals a small shoulder that remains up to
30°C on the high-temperature side of the main transition peak.
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| DISCUSSION |
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). For a detailed discussion on these topics the review of Saxton (1999)
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) for a system of tracer diffusion with mobile point obstacles (Tahir-Kheli, 1983
can be varied from zero (obstacles moves much faster than tracers) to infinity (immobile obstacles). The value of D* in this model is given by
![]() | (2) |
![]() |
![]() |
is a constant that depends on the lattice. It is equal to 12/
for a square lattice, 0.2820 for a triangular lattice, and 0.500 for a honeycomb lattice (Le Claire, 1970
. Similar curves are obtained for the other two lattices. Note that the shape of the curve D* vs. c does not change appreciably when
is in the range of 13.
Monte Carlo simulations of mobile obstacles of variable size
In a Monte Carlo study on a triangular lattice it was found that D* was largely independent of the obstacle radius for circular objects and D* was given in a polynomial form as (Saxton, 1987
)
![]() | (3) |
= 1) and a comparison with Eq. 2 shows that D* is generally slightly below that for point obstacles (Fig. 4 b). The assumption of
= 1 is a simplification, since larger objects move slower. The dependence of DL on the radius of the obstacles is, however, rather weak (Saffman and Delbrück, 1975
, as long as
is in the range of 13.
The free volume model with boundary lipids
Almeida and co-workers have used the free-volume model (Cohen and Turnbull, 1959
) and its two-dimensional analog (Clegg and Vaz, 1985
; Vaz et al., 1985
), and they extended it to include a boundary region around the obstacles (Almeida et al., 1992b
). In this region the lateral diffusion of the lipids is assumed to decrease due to an increased ordering of the lipids close to the obstacles. The numerical result, valid for 1.17 < R/
< 20, for obstacles with a circular cross section is (Almeida et al., 1992b
)
![]() | (4) |
is the coherence length of the decay function for the free area. This model is comparable to the two first models without bound lipids if
is set to zero. For nonzero values of
it gives a similar effect as for bound lipids. The mobility of the obstacles does not explicitly enter this model, but the limiting behavior for
= 0, corresponding to hard sphere interactions, gives D* = 1c, which resembles the curves of Eqs. 2 and 3 for mobile obstacles. Eq. 4 is illustrated in Fig. 4 c for some values of the dimensionless parameter R/
.
Percolation
When the area fraction of the obstacles increases the obstacles must increase in size and/or number. At a certain area fraction of obstacles the surrounding fluid phase will be disconnected and the lateral diffusion can no longer occur over arbitrarily large distances. This happens at the so-called percolation threshold (pc) and it is accompanied by the absence of long-range diffusion. Although percolation cannot strictly occur in a system with mobile obstacles, the long-range diffusion will also be severely restricted in such systems, as long as the disconnecting structures do not change appreciably on the timescale of the measurement. The percolation threshold is dependent on the obstacle geometry, since elongated objects are more effective in disconnecting the fluid phase. For elliptical objects the interpolation formula
gives good agreement with computer simulations (Xia and Thorpe, 1988
). Note that pc is defined as the area fraction of obstacles in this work, whereas it is the area fraction of the conducting (fluid) phase in the work of Xia and Thorpe (1988)
. The value y is a function of the aspect ratio,
, of the ellipses, y =
+ 1/
. The value pc drops rapidly from 0.67, which is the value for circular objects, to 0.3 for an aspect ratio of 10i.e., the less compact the shape of the obstacle is, the more effective in obstructing it will be.
Comparison of the models with experimental results
In studies of protein and lipid diffusion in the bacteriorhodopsin/DMPC (Peters and Cherry, 1982
) and gramicidin C/DMPC (Tank et al., 1982
) the reduction in D* is found to be larger than expected from Eqs. 2 and 3 (Saxton, 1987
). One possible explanation to this is that the effective area of the obstacles is greater than expected due to lipids bound to the obstructing species. For a lipid to be bound it is necessary that the motion of the lipid is restricted by the obstacle for times much longer than the characteristic time between the random lipid movements (jumps). It is, however, not necessary that the lipid stays in contact with the obstacle for the whole diffusion time. The PFG-NMR experiment measures the average diffusion for the whole ensemble of lipids during the diffusion time and, assuming that the same fraction of lipids are bound at all times, exchange of lipids between bound and free sites will not affect the result, as long as this exchange is fast compared to the diffusion time. If we denote the number of bound lipids per gD by nl, the effective area of obstacles can be written as
![]() | (5) |
Equation 4 also takes into account the interaction between lipid and peptide through the
-parameter. For proteins without bound lipids
is expected to be small, whereas a larger
indicates a larger lipid-protein interaction. This model has been tested for a variety of integral proteins and gel phase obstacles (Almeida et al., 1992a
). In general
is found to be slightly above 20 Å for the larger proteins, whereas it is only 1 Å for gD. The different behavior for gramicidin is accounted for by the different size of this peptide.
Percolation over µm-length scales has been observed by FRAP in lipid bilayer systems, in which the fluorescence recovery and the characteristic recovery times change drastically at the percolation threshold (Almeida et al., 1992a
, 1993
; Vaz et al., 1989
). The observed values of the percolation threshold range from 0.2 to 0.8 and this variation is taken as an indication of the presence of different domain shapes.
Obstructed diffusion in the one-phase region
Fig. 5 shows D* as a function of Xg at 25, 30, and 35°C together with nonlinear fits of the data to Eqs. 24. For Eqs. 2 and 3, ceff calculated according to Eq. 5 has been used to get nl. The data for 30 and 35°C coincide in this figure (circles and squares). Previously published data of the diffusion of a fluorescence probe at 30°C (Tank et al., 1982
) also fall on the same curve (triangles), when normalized with the DL value obtained by us for Xg = 0 at 30°C. One value of Tank et al. (Xg = 5, D* = 1.0) deviates significantly from the other values and has been excluded from the analysis. Since all the points for 30 and 35°C lie on the same curve within experimental error, all points are fitted together. The results of the fits give nl = 5,
= 3.4 for Eq. 2, nl = 4.9 for Eq. 3, and
= 6.9 Å for Eq. 4. The values of both nl and
roughly correspond to one layer of bound lipids around each gD molecule. Thus, it seems that all three models presented earlier produce reasonable values for the fitted parameters and although the models rely on different premises, they are each able to describe the obstruction effect in this system. The value of
differs from that found in the analysis by Almeida et al. (1992a)
. One possible reason for this might be that our study was made with saturated DMPC, whereas the system analyzed by Almeida et al. (1992a)
contained mainly unsaturated PCs (Blackwell and Withmarsh, 1990
).
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= 3.6 for Eq. 2, nl = 13.5 for Eq. 3, and
= 21.6 Å for Eq. 4. This increase in the parameters does not necessarily reflect a change in the number of bound lipids, since at higher gD content a single phase is no longer present. According to the DSC data significant amounts of the lipids are in the solid phase for Xg > 0 at 25°C, and therefore, the lipid diffusion will be affected both by obstruction from the peptide and by the gel clusters formed by the lipids. Thus, the data can no longer be interpreted as an obstruction of gD (with bound lipids) alone.
Obstructed diffusion in the two-phase region
To include the effect of the presence of a gel phase on DL, we make the following assumptions: diffusion is reduced 1), at lower temperatures according to the activated diffusion process; 2), due to the obstacles that gD constitutes, together with the bound lipids; and 3), due to hindered diffusion from the gel clusters that appear at lower temperatures. The influence on DL from 1 can be accounted for by assuming that the diffusion process can be described with an EA = 50 kJ/mol in the whole temperature interval. The temperature dependence can thus be reduced to DL(Xg, T0) by multiplying each DL(Xg, T) by the factor exp{(EA/R) x (1/T1/T0)}. The value of T0 is chosen to be 35°C where no gel phase is present. These reduced data now depend only on the obstructed diffusion by the factors given in 2 and 3, i.e., the area fraction of obstacles produced by gD with bound lipids and gel clusters. The factor in 2 can be calculated from the areas of gD and DMPC, under the assumption that the same number of lipids bind to each gD in the whole temperature interval. To quantify the fraction of gel phase present (fg), the DSC curves have been integrated. In this integration the pretransition has been removed by interpolating the curve for the main transition across the temperature region of the pretransition. The area fraction of obstacles can now be written as
![]() | (6) |
and in the gel phases, respectively. The value fg is the fraction of the gel phase present. In the derivation both bound and unbound lipids are allowed to enter the gel phase in the same amount. Assuming that bound lipids exclusively are in the liquid phase affects the results only marginally.
The temperature-corrected D* values for different Xg and temperature are plotted versus ceff in Fig. 6. In the calculation of ceff the following values have been used: A = 137 Å2, a = 65 Å2, a' = 55 Å2 (Killian, 1992
; Lewis and Engelman, 1983
; Marsh, 1990
), and nl = 4.7. This figure summarizes all the data in a format, where only obstruction effects are present. Here all data fall on the same curve. The line corresponds to Eq. 3 for mobile obstacles. It is obvious that the reduction in DL can be described by mobile obstacles containing gD with bound lipids and/or gel phase clusters. The adherence of the points to Eq. 3 indicates that no percolation takes place in the system and that the obstructing aggregates can be described as more or less circular in shape, at least as seen on the length scale defined by the diffusion time. For the longest diffusion time, 500 ms, this corresponds to roughly 5 µm. No indications can be seen of linear aggregates on the submicrometer length scale, such as those reported in the gel phase by atomic-force microscopy (Ivanova et al., 2003
; Mou et al., 1996
; Rinia et al., 2000
). If, for example, linear aggregates of the type shown in Fig. 4 in Ivanova et al. (2003)
or Fig. 1 in Rinia et al. (2000)
are present, a significant fraction of the lipids will be trapped in corrals with dimensions <1 µm and the apparent diffusion coefficient will become dependent on the diffusion time. Furthermore, in the percolated system at 5 mol % gA described in Mou et al. (1996)
, the lipid motion would be restricted to tens of nanometers and the measured diffusion coefficient would be magnitudes smaller than that for unrestricted diffusion.
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| CONCLUSIONS |
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| ACKNOWLEDGEMENTS |
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Submitted on December 17, 2003; accepted for publication April 12, 2004.
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