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Computational Biomechanics Division, Institute of Environmental Studies, Graduate School of Frontier Sciences, The University of Tokyo, Bunkyo-ku Tokyo 113-0033, Japan
Correspondence: Address reprint requests to Hiroshi Watanabe, PhD, Computational Biomechanics Div., Institute of Environmental Studies, Graduate School of Frontier Sciences, The University of Tokyo Hongo 7-3-1, Bunkyo-ku Tokyo 113-0033, Japan. Tel.: +81-3-5841-8589; Fax: +81-3-3818-0835; E-mail: nabe{at}sml.k.u-tokyo.ac.jp.
| ABSTRACT |
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| INTRODUCTION |
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To construct a comprehensive model of the heart that can accurately simulate the series of events during cardiac cycle, microscopic as well as macroscopic mechanisms should be taken into consideration. Furthermore, description of each event involves the coupling of various disciplines such as electricity, physical chemistry, solid mechanics, and fluid dynamics (multiphysics simulation). Among these, many simulation studies have already been reported in the field of electrophysiology both at the cellular (Luo and Rudy, 1991
; Noble et al., 1998
) and organ levels (Kohl et al., 2000
; Nakazawa et al., 1999
; Winslow et al., 2000
) and some of them could successfully integrate the cellular models to simulate the genesis and evolution of arrhythmia in the whole heart (Nakazawa et al., 1999
; Winslow et al., 2000
). Similarly in the field of mechanics, attempts have been made to describe the cross-bridge kinetics (Negroni and Lascano, 1996
; Peterson et al., 1991
; Rice et al., 1999
), motion of the left ventricle (LV) muscle (Hunter et al., 1988
; Huyghe et al., 1992
), and fluid-structure interaction in the ventricle (Kovacs et al., 2001
; McQueen and Peskin, 2000
). However, so far, none of these models have simulated blood flow and the wall motion of the heart powered by the subcellular molecular mechanisms including electrical activity.
To simulate the pumping action of the human LV, we have already developed a fluid-structure interaction (FSI) finite element (FE) model incorporating the propagation of excitation and subcellular excitation-contraction (E-C) coupling mechanisms of individual cardiac myocyte (Watanabe et al., 2002
). In addition, in this model, an arbitrary Lagragian Eulerian (ALE) finite element method (FEM) with automatic mesh updating has been formulated for large domain changes, and a strong coupling strategy has been taken. As a result, intraventricular blood flow distribution (macroscopic finding) could successfully be related to the molecular mechanism of cardiac contraction for the first time. However, because this was the simple prototype consisting of only LV and systemic arterial system as an afterload, further improvements to the model were necessary to simulate the various aspect of the heart in both normal and diseased states.
Accordingly, in this study, we have incorporated the dynamics of the left atrium (LA) and pulmonary circulation into the model to simulate the ventricular filling dynamics, one of the important issues in cardiology. The results were compared with both experimental and clinical findings to show the usefulness of this method. Especially, information on intraventricular flow provided by the model facilitated the detailed comparison with the observation by Doppler echocardiography including color M-mode Doppler measurement (Brun et al., 1992
).
| METHOD |
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Excitation and propagation
Upon stimulations, myocardial cells are excited and contract to develop force. In this model, all of the myocardial cells are electrically connected so that the excitation initiated at a single site can propagate to all of the myocardial cells. By combining the FitzHugh-Nagumo (FHN) model (FitzHugh, 1961
; Nagumo et al., 1962
), with the monodomain propagation model (Hodgkin and Huxley, 1952
), the excitation and its propagation in myocardial tissue can be given by
![]() | (1) |
![]() | (2) |
E-C coupling
After excitation (membrane depolarization), a series of subcellular events leads to a transient increase in intracellular calcium concentration [Ca2+], which in turn controls the interaction of contractile proteins namely actin and myosin (cross-bridge kinetics) to develop a force. To describe the dynamic relationship between [Ca2+] and cross-bridge kinetics, a four-state model proposed by Peterson et al. (1991)
was employed. To connect the membrane depolarization (FHN model) and the four-state model for E-C coupling, a FHN model was used to give a trigger (timing) for the phasic change in Ca2+ ion concentration (Ca2+ transient) described by the following function of time (Peterson et al., 1991
):
![]() | (3) |
Ca = 80 ms (Peterson et al., 1991
The binding of Ca2+ with regulatory protein troponin C (TnC) releases the inhibition to allow the contractile proteins to form "attached" cross-bridges responsible for force generation. However, because it has been shown that the attached cross-bridges remain attached, even after the unbinding of Ca2+ from TnC, the following two states belong to the force-generating populations: 1), TnC binds with Ca2+ and a cross-bridge is attached (O), and 2), TnC does not bind with Ca2+ but the cross-bridge remains attached (O'). In addition, the following two states are defined: 3), TnC binds with Ca2+ but the cross-bridge is detached (U), and 4), TnC does not bind with Ca2+ and the cross-bridge is detached (U'). The complete system can be represented by evolutional equations in matrix form as follows:
![]() | (4) |
are constants that determine the transition rate between the states. The force is given by the sum of the populations in two "attached" states:
![]() | (5) |
The calculated time courses of normalized membrane potential xN = x/xmax in the FHN model, [Ca2+]f, and F are shown in Fig. 1 A. In this simulation, F was modified so as to incorporate shortening deactivation (Leach et al., 1980
) due to the ejection of blood starting at 0.1 s.
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![]() | (6) |
![]() | (7) |
![]() | (8) |
In the above equations, I1 is the first strain invariant defined as I1 = tr C, where C is the right Cauchy-Green deformation tensor. I4 is a parameter that represents the deformation in muscle fiber direction defined as I4 = nCn, where n is a unit vector defining the preferred direction of muscle fibers in the undeformed state. Under the assumption of incompressibility, the second Piola-Kirchhoff stress is derived as follows:
![]() | (9) |
![]() | (10) |
Because the mechanical properties of cardiac muscle vary depending on the population of the attached cross-bridges, F, we made the coefficients for the active components, c5
c10, to be functions of F, whereas those for the passive components, c1
c4, to be constants. To model the phasic change in the stress-strain relationship during the cardiac cycle, the coefficients were expressed as
![]() | (11) |
FSI analysis
Here, we briefly describe the outline of the fluid-structure interaction FE analysis (for precise formulation; see Zhang and Hisada, 2001
). Also a short review of ALE method and strong coupling method are shown in Appendix). The fluid is assumed to be Newtonian. The ALE form of the Navier-Stokes equations are discretized using the Galerkin method and FEM. Upon total Lagrangian formulation, the equilibrium equations for structure are discretized using FEM. The full interaction conditions between the fluid and structure are introduced, i.e., the geometrical compatibility conditions and the equilibrium conditions are given. These conditions are automatically satisfied through the element assemblage process. Thus, the system equations in the strong coupling method are constructed. For the time integration method, the extended predictor-multicorrector algorithm is employed based on the Newmark-ß time integration scheme.
In this simulation, the boundaries of the fluid can be assumed to consist of open boundaries and the interface with a deformable structure. Under these boundary conditions, the following methods are employed for mesh control in the fluid domain. The mesh is fixed in space for open boundaries. On the interface with a deformable structure, due to the nature of the strong coupling method, the Lagrangian motion is enforced. In other words, the ALE coordinates are set to be identical to the Lagrangian coordinates on the deformable interface. With these boundary conditions, the motion of the interior nodes is determined by solving the Laplace equation.
| FE MODEL OF THE LV |
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5055 ml in this model), the LVP becomes negative to reach the negative part of the end-diastolic pressure volume relationship. We, therefore, assumed the initial volume of LV (LVV) (LVV at which LVP is 0 Pa) is slightly larger than these ESV values, i.e., 60 ml. To create an FE mesh of the initial shape of the LV (volume 60 ml), we first generated a mesh from the magnetic resonance (MR) images of an adult human LV at end diastole, then modified it by applying an appropriate negative pressure. The resultant FE mesh is shown in Fig. 2.
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We used Q1-P0 mixed hexahedral elements (eight nodes for the bilinear velocity or displacement interpolation/constant pressure field) for both the fluid and the structure. To evaluate the spatial convergence of the model, we repeated calculation using two kinds of meshes with different spatial resolution and compared the results. The coarse mesh consisted of 2636 solid and 2448 fluid elements having
20,000 no. of degree of freedom (NDOF). The fine mesh consisted of 18,976 solid and 9792 fluid elements having
120,000 NDOF.
In the electrophysiological analysis, the same structural mesh was used as an electrophysiological unit. In other words, each FHN cell unit is embedded in each finite element, and it is electrically connected with the cells in the surrounding elements (see Fig. 2). The excitation of one element, thus, conducts to surrounding elements under the assumption of isotropic conduction.
Models of systemic arterial tree and pulmonary circulation including LA
To simulate the systemic arterial tree, the windkessel model (Westerhof et al., 1971
) characterized by the following equations was used (see Fig. 2).
![]() | (12) |
![]() | (13) |
![]() | (14) |
P is the aortic pressure, FAo is the blood flow ejected from the LV, R1 is the characteristic impedance, R2 is the peripheral resistance, and C is the capacitance. In this analysis, the following values are employed for these parameters: R1 = 1.00 MPa s/m3, R2 = 150 MPa s/m3, and C = 0.016 µm3/Pa (Murgo et al., 1980
; Stergiopulos et al., 1999
).
To model the dynamics of the LA and pulmonary circulation, an electrical analog model proposed by Alexander et al. (1987)
was used with some modifications (Eqs. 1518).
![]() | (15) |
![]() | (16) |
![]() | (17) |
![]() | (18) |
Atrial function is usually characterized in terms of reservoir, conduit, and pump function. In this model, the LA was characterized by the time-varying elastance defined as
where PLA is pressure of LA (LAP), qLA is volumes of LA (LAV), and q0 is the volume axis intercept. To model the reservoir and pump function of LA, the time course of ELA (time varying elastance of LA) was defined as follows: 1), in the resting state in which LA acts as a reservoir, LAP was a linear function of LAV, i.e., ELA(t) was constant, ELA(t) = 13.3 MPa/m3; and 2), the contraction of LA started 0.15 s earlier than that of the LV (atrio-ventricular conduction delay) and lasted for 0.2 s with a time course approximated by a sinusoid,
MPa/m3, where t0 is cardiac cycle. PV is the pulmonary source pressure, RV is the source resistance, CP is the pulmonary venous capacitance, RP is the pulmonary resistance, LP is the pulmonary inertance, RAV is the atrioventricular resistance, LAV is the atrioventricular inertance, FRL is the pulmonary venous flow, FMi is the blood flow through the mitral valve, qP is the volume of the pulmonary venous, and PLV is the pressure boundary condition for the FSI model (see Fig. 2). The following values are assumed for these parameters: PV = 1600 Pa, RV = 0.333 MPa s/m3, CP = 0.0525 µm3/Pa, RP = 12.0 MPa s/m3, LP = 0.133 MPa s2/m3, RAV = 3.47 MPa s/m3, LAV = 0.267 MPa s2/m3.
Material properties
The coefficients in the passive part of the Lin-Yin model (c1c4) were determined so that the LVV becomes 120 ml when the LVP is 1500 Pa under fully relaxed conditions. This was achieved by using 80% of the average value reported by Lin and Yin (Lin and Yin, 1998
). The coefficients in the active part (c5c10) were also determined to meet the following conditions:
First, we determined the c10 required to fulfill condition 1. Then, c5
c9 were determined to achieve condition 2. The coefficients thus determined were as follows: c1 = 82.4 Pa, c2 = 7.30, c3 = 1.86, c4 = 0.0640,
In addition, the density of cardiac muscle was assumed to be
= 1.37 x 103 kg/m3, the density of blood
= 1.06 x 103 kg/m3, and the viscosity of blood µ = 4.71 x 103 Pa s.
Simulation
In the case of normal contraction, the excitation conducting from the atria spreads rapidly over the entire endocardium via the conduction system (Purkinje fibers) and then propagates toward the epicardium within a short period of time (<40 ms). To meet this condition, Eqs. 1 and 2 are solved with the following nondimensional initial values and coefficients: x = 1.20, y = 0.624, a = 0.70, b = 0.80, c = 0.70, g = 1.00, and z = 20.0, and the stimulation time of 50 ms was imposed on all of the elements in the endocardium.
The following boundary and initial conditions were set for each period during the cardiac cycle. During the isovolumic contraction period, both the mitral and aortic valves were closed so that the flow velocity was zero at those two boundaries. The initial value of LVV was 120 ml at an LVP of 1500 Pa under fully relaxed conditions. Then, the muscles were activated by the excitation-contraction mechanism (represented by the FHN model and the four-state model) to increase the LVP. When the LVP exceeded the aortic pressure (AP) calculated by the windkessel model, the aortic valve opened. During the ejection period, with the mitral valve closed, the pressure boundary condition given by the windkessel model was applied to the open aortic valve area. The FSI FE model and the windkessel model were iteratively calculated to determine the equilibrium state, and when backward flow occurred in the aorta, the aortic valve closed to finish ejection. From this point, the windkessel was disconnected from the LV and its status was calculated under the condition that FAo = 0 until the next cardiac cycle. During isovolumic relaxation period, the relaxation of cardiac muscles proceeded while both the aortic and mitral valves closed. When the LVP fell below the LAP, the mitral valve opened, and the filling period began. Based on these assumptions, we simulated three cycles of contractions for a heart rate (HR) of 60, 75, 90, and 120 beats per minute (one cardiac cycle: 1.0 s, 0.8 s, 0.665 s, and 0.5 s, respectively). In this model, Ao and LA are not modeled by finite element, so that the displacement and the velocity of the node located in the atrio-ventricular ring are fixed to zero though the cardiac cycle. The time step is set to 1.0 ms during the ejection phase, and 2.5 ms in other phases.
| RESULTS AND DISCUSSION |
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10 mm) was definitely smaller compared to the reported value for normal subjects (
16 mm) (Alam and Hoglund, 1992
20 Hz). during ejection (Fig. 6, A and B). Ventricular torsion is shown in Fig. 6 B. During contraction, LV initially twisted clockwise by a small amount, then a counter-clockwise direction as it ejected the blood. Moon et al. studied the torsion of canine LV using radio-opaque marker technique and reported the similar time course of torsional deformation with the maximum amplitude of
6° at baseline and
17° under inotropic intervention (Moon et al., 1996
5mm. It is well known that, at end systole, the wall thickness of septum is twice as large as that of posterior wall (Lundback, 1986
3.2 cm/s. This value is smaller than that of diastolic posterior wall velocity for normal subject by Fujii et al. (7.3 cm/s) (Fujii et al., 1979
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25% with the maximum deviation occurring at end systole, which agreed well with reported data for normal subjects (Bowman and Kovacs, 2004
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0.8m/s, which again agreed well with reported data for normal subjects (Brun et al., 1992
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Simulation of diastolic filling
With the advancement of Doppler echocardiography, a pattern of LV filling has been analyzed to detect the diastolic dysfunction. Although, so far, several indices have been proposed such as the peak velocity of early rapid filling, atrial contraction, their ratio, and the acceleration and deceleration times of the early filling wave, they are mostly empirical in nature (Thomas and Weyman, 1991
). Accordingly, simulation (Kovacs et al., 1987
; Meisner et al., 1991
; Thomas and Weyman, 1991
, 1992
) as well as experimental studies (Ishida et al., 1986
) has been performed to establish a link between the tissue property and filling pattern. Thomas and Weyman (1991
, 1992
), using a lumped parameter model, successfully simulated the influence of the left ventricular relaxation rate on the peak velocity of early rapid filling, atrial contraction, and their ratio, but it is beyond the scope of the lumped model to examine the effect of the propagation of excitation and/or detailed cellular function. Furthermore, flow propagation velocity, which is now emerging as a useful index of ventricular relaxation rate (Brun et al., 1992
), can only be simulated by the three-dimensional fluid-structure-interaction model in this study. We are now attempting to simulate the filling patterns in various diseased states including cardiomyopathy and ischemia.
Study limitation
Toward the complete modeling of the left ventricular filling, there are still many aspects to be added to the current model. Because of the limitation in computational power, LA was modeled as an electrical analog circuit. This treatment might have obscured the physiology of LA, which is usually characterized by reservoir, conduit, and pump function. However, from the analogy to LV time-varying elastance model (Suga and Sagawa, 1974
), pump function can be characterized by the maximum value of elastance of LA (ELA(t) in Fig. 2). Reservoir function is evaluated by the difference between the maximum and minimum LA volumes (LA reservoir volume), which is influenced by the minimum value of ELA(t). Conduit function can also be evaluated by the difference between LV stroke volume and LA reservoir volume in Fig. 7 D. However, to study the ventricular stroke under a variety of conditions ranging from normal to abnormal, LA with realistic shape and tissue property is necessary.
The constitutive equation proposed by Lin and Yin (1998)
was employed to model the myocardial tissue in which material property was divided into passive and active parts. Active part represents the change in myocyte property induced by the cross-bridge formation. Passive property of the myocardium is determined by the extracellular matrix (collagen) and passive components of myocyte (cytoskeleton including titin). Considering the complexity and importance of passive property of these components (Hein et al., 2002
), a detailed model is required to simulate various diseased state such as cardiac hypertrophy; however, in this model, all these parameters are lumped in the anisotropic stress-strain relations.
It is recognized that diastolic function is determined by dynamic and passive chamber stiffness and relaxation of the ventricle. In this model, relaxation is characterized by the time constant for the decay of Ca2+ transient (
in Eq. 3). Passive chamber stiffness is formulated by the constitutive equation representing the passive component (Eq. 6). However, we did not incorporate the dynamic property of chamber stiffness in the model. Although it has been shown that the difference between dynamic and passive diastolic property is slight in a normal subject, there is a marked discordance in diseased states such as hypertrophic cardiomyopathy (Pak et al., 1996
). Dynamic property should also be incorporated in the future modeling.
The FitzHugh-Nagumo model was adopted for simulating electrical activity in this model. As this is obviously an oversimplification of reality in which many transmembrane ionic currents (Na, K, Ca, Cl, etc.) and intracellular [Ca2+] dynamics determine depolarization, we are now improving the model by incorporating ion channel models proposed by Faber and Rudy (2000)
with 16 membrane currents.
| SUMMARY |
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| APPENDIX |
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with B, P, and
being the fluid bulk modulus, the pressure, and the fluid density, respectively. The ALE form of the Navier-Stokes equations can be expressed as
![]() | (A1) |
![]() | (A2) |
is the time derivative in the ALE coordinates, the velocity of which is vm, and the convective velocity c = v vm.
is the Cauchy stress and g the acceleration of gravity.
denotes the spatial domain with the boundary
at time t. The superscript f stands for the fluid component. The fluid is assumed to be Newtonian. Using the Galerkin method and finite element discretization for Eqs. A1 and A2, we obtain the following equations in the matrix form:
![]() | (A3) |
![]() | (A4) |
and M are the generalized mass matrices for pressure and velocity, respectively, and
and
are the generalized matrices of convective terms for pressure and velocity, respectively.
is the fluid viscosity matrix, G is the divergence operator matrix,
and
are the time derivatives of the pressure and velocity vectors, respectively, in the ALE coordinates, and F is the external force vector. As for the stabilization, standard streamline upwind/Petrov Galerkin formulation (Tezduyar et al., 1992
Let
be the spatial domain of a structure. Here the superscript s stands for the structural component. The equilibrium equations for structure are:
![]() | (A5) |
Upon total Lagrangian formulation and finite element discretization, a nonlinear system of equations is obtained in the matrix form, and the incremental form at each time step is given as follows:
![]() | (A6) |
Here, M is the mass matrix, K the tangent stiffness matrix, and F the external force vector.
is composed of the internal force and the inertial force of the structure, and
and
are the increments of the acceleration and the displacement vectors, respectively.
The full interaction conditions between the fluid and structure are introduced, i.e., the geometrical compatibility conditions:
![]() | (A7) |
![]() | (A8) |
is the interface between the fluid and the structure.
The above conditions are automatically satisfied through the element assemblage process. Thus, the system equations in the strong coupling method are constructed, and the incremental form can be expressed as
![]() | (A9) |
and
are the variable vectors of the coupled system, as defined by
![]() | (A10) |
the velocity vector of the fluid independent of the structure,
the coupled velocity vector,
the velocity vector of the structure independent of the fluid,
the coupled displacement vector, and
the displacement vector of the structure independent of the fluid. In Eq. A9, F denotes the external force vector of the coupled system and
the equivalent internal force vector including all effects.
denotes the mass matrix composed of those for the fluid and the structure.
consists of the divergence, viscous, and convective terms of the fluid.
is the tangent stiffness matrix of the structure. | SUPPLEMENTARY MATERIAL |
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| ACKNOWLEDGEMENTS |
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This work was supported in part by the grants from Core Research for Evolutional Science and Technology of the Japan Science and Technology Agency and National Cardiovascular Research Center, The Program for Promotion of Fundamental Studies in Health Sciences of the Organization for Pharmaceutical Safety and Research, Suzuken Memorial Foundation, and The Research Grant for Cardiovascular Disease from the Ministry of Health, Labor and Welfare.
Submitted on October 16, 2003; accepted for publication May 28, 2004.
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