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Lehrstuhl für Biotechnologie, Theodor-Boveri-Institut (Biozentrum) der Universität Würzburg, Am Hubland, D-97074 Würzburg, Germany
Correspondence: Address reprint requests to Roland Benz, Lehrstuhl für Biotechnologie, Theodor-Boveri-Institut (Biozentrum) der Universität Würzburg, Am Hubland, D-97074 Würzburg, Germany. Tel.: 49-0931-888-4501; Fax: 49-0931-888-4509; E-mail: roland.benz{at}mail.uni-wuerzburg.de.
| ABSTRACT |
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and
) of ligand binding. The on-rate constants of ligand binding were between 106 and 108 M1 s1 and were dependent on the ionic strength of the aqueous phase, sidedness of ligand addition, as well as the orientation and intensity of the applied electric field. The off-rates varied between
10 s1 and 2600 s1 and depended mainly on the structure of the ligand. | INTRODUCTION |
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, and interleukin-1ß is an actual subject of particular interest (Hanna et al., 1993
1 nM) (Cunningham et al., 2002
-hemolysin also formed by a heptamer (Song et al., 1996
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| MATERIALS AND METHODS |
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Lipid bilayer experiments
Black lipid bilayer membranes were formed as described previously (Benz et al., 1978
). The instrumentation consisted of a Teflon chamber with two aqueous compartments connected by a small circular hole. The hole had a surface area of
0.4 mm2. Membranes were formed by painting onto the hole a 1% solution of diphytanoyl phosphatidylcholine (Avanti Polar Lipids, Alabaster, AL) in n-decane. The aqueous salt solutions (Merck, Darmstadt, Germany) were buffered with 10 mM MES, pH 6. Control experiments revealed that the pH was stable during the time course of the experiments. Chloroquine and related compounds were obtained from Sigma (Deisenhofen, Germany). PA63 was reconstituted into the lipid bilayer membranes by adding concentrated stock solutions to the aqueous phase to one side (the cis-side) of a membrane in the black state. The temperature was kept at 20°C throughout.
Titration experiments
These measurements were performed with multichannel membranes. The membrane current was measured with a pair of Ag/AgCl electrodes with salt bridges switched in series with a battery-operated voltage source and a homemade current to voltage converter made using a Burr Brown (Dallas, TX) operational amplifier (with a three-pole filter). The feedback resistors of the current amplifier were between 0.01 and 10 G
. The amplified signal was recorded with a strip chart recorder to measure the absolute magnitude of the membrane current and to calculate the stability constant for ligand binding to PA. The conductance data of the titration experiments were analyzed using equations derived earlier for the carbohydrate-induced block of the maltoporin- and CymA-channels, respectively (Benz et al., 1987
; Orlik et al., 2002
, 2003
).
Noise analysis
The amplified signal was simultaneously fed through a four-pole Butterworth low-pass filter (Krohn-Hite model 113340, Brockton, MA) into an AD-converting card of an IBM-compatible PC. The digitized data were analyzed with a homemade fast Fourier transformation program, which yielded identical results as compared to a commercial digital signal analyzer (Ono Sokki CF 210, Addison, IL). The spectra were composed of 400 points and they were averaged either 128 or 256 times. The power density spectra were analyzed using commercial graphic programs. For the derivation of the rate constants of ligand binding they were fitted to equations described in previously performed studies (Benz et al., 1987
; Andersen et al., 1995
; Orlik et al., 2002
).
| RESULTS |
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10 ng/ml) bathing a black lipid bilayer membrane. The recombinant protein formed well-defined, cation-selective channels in lipid bilayer membranes, which exhibit rapid flickers especially at higher KCl concentrations (see Fig. 3). Its single-channel conductance of
180 pS in 1 M KCl, 10 mM MES, pH 6 (applied voltage 50 mV) agrees well with previous studies performed with trypsin nicked PA63 (Blaustein et al., 1989
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0.5 was observed on a double-logarithmic scale for the conductance versus concentration curve (see Fig. 4). This result indicates that charge effects influence the properties of the PA63-channel. These charge effects are caused by negatively charged groups either localized in the vestibule of the channel or in its inside resulting in a substantial ionic-strength dependent potential, which attracts cations and repels anions. A quantitative description of the effect of point charges on the single-channel conductance may be given by the following considerations. The first one is based on the Debeye-Hückel theory describing the effect of point charges in an aqueous environment. The second treatment was proposed by Nelson and McQuarrie (1975)
is created that is dependent on the distance, r, from the point charge:
![]() | (1) |
0 (= 8.85 x 1012 F/m) and
(= 80) are the absolute dielectric constants of vacuum and the relative constant of water, respectively, and lD is the so-called Debeye length that controls the decay of the potential (and of the accumulated positively charged ions) in the aqueous phase:
![]() | (2) |
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2,250,000 M1 (half-saturation constant KS = 0.44 µM) for the binding of fluphenazine to the PA63-channel in the experiment of Fig. 5 (see Fig. 6). Similar analyses were also performed in this study with chloroquine and quinacrine. Highest binding constants were found in 150 mM KCl solution for quinacrine (K = 12,300,000 1/M) followed by fluphenazine (K = 5,353,000 1/M) and chloroquine (K = 675,600 1/M). The stability constants for 4-aminoquinolones binding to PA63 are by a factor of
4 (fluphenazine) to 14 (quinacrine) higher than for C2-toxin (see Table 2).
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Analysis of the ligand-induced current noise through the PA63-channel
Parallel to the titration measurements the spectral density was measured using fast Fourier transformation of the current noise. After recording of reference spectra we added fluphenazine in increasing concentration to the aqueous phase with stirring to allow equilibration. An example is given in Fig. 7 A for the measurement of current noise of
1600 PA63-channels without fluphenazine (trace 0; 0 µM). At small frequencies up to
100 Hz the spectral density was dependent on 1/f, which is typical for open bacterial porin channels (Nekolla et al., 1994
; Wohnsland and Benz, 1997
; Bezrukov and Winterhalter, 2000
). Trace 1 of Fig. 7 A shows a power density spectrum taken at 20 nM fluphenazine. In further experiments the concentration of fluphenazine was increased in defined steps. At another concentration of fluphenazine (c = 80 nM) the power density spectrum corresponded to that of trace 2 in Fig. 7 A. The power density spectra of the current noise shown in Fig. 7 A (traces 1 and 2) corresponded to that of Lorentzian type and could be fitted to single Lorentzians after the subtraction of the reference spectrum.
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![]() | (3) |
Such a type of noise is expected for a random switch with different on and off probabilities (Verveen and De Felice, 1974
; De Felice, 1981
; Conti and Wanke, 1975
).
The corner frequencies, fc, of the Lorentzians are dependent on the on- and off-rate constant, k1 and k1, for fluphenazine binding to the binding site of the PA63-channel. This means that the corner frequencies, fc, should increase with increasing fluphenazine concentration.
Assuming small perturbations of the number of closed channels due to microscopic variations of the number of bound ligand molecules, the reaction rate of the second order reaction given in Eq. 3 is given by:
![]() | (4) |
This was the case for all noise measurements including the experiments shown in Fig. 7 A. The reaction rate 1/
was plotted as a function of the fluphenazine concentration in the aqueous phase. Fig. 8 shows the fit of the corner frequencies,
of the experiments shown in Fig. 7 A and of other fluphenazine concentrations (data not shown). The rate constants for the binding of fluphenazine to the PA63-channel were
= 119 x 106 M1·s1 and
= 11.4 s1. This corresponds to a stability constant, K, for the binding of fluphenazine to the binding site inside or at the PA63-channel of 10,057,000 M1. Fig. 7 B shows a similar experiment performed with chloroquine. However, it is clear from the spectra of Fig. 7 B that the kinetics of chloroquine binding to PA63 is much faster than the kinetics of fluphenazine binding to PA63. This reduces the plateau value S0 of the power density spectra and also increases the corner frequency. Fitting of the corner frequencies similar to Fig. 8 (data not shown) resulted in the rate constants for the binding of chloroquine to the PA63-channel:
= 350·106 M1 x s1 and
= 330s1. This corresponds to a stability constant, K, of 1,057,000 M1.
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Voltage-dependent asymmetric ligand binding
4-Aminoquinolones such as chloroquine are twofold positively charged at neutral pH. Therefore, binding of chloroquine to PA63 is supposed to be influenced by the polarity of the applied electric field. For all the measurements performed so far, we applied positive voltages to the cis-side of the membrane because the channels closed when negative voltages of more negative than 20 mV were applied to the cis-side. Table 4 summarizes the parameters of chloroquine-induced current noise in PA63 depending on the orientation and intensity of the applied electric field. The data show that both on- and off-rates were affected by the polarity of the applied electric field; even so the effect on
was more pronounced. When chloroquine was added to the trans-side of the membrane and the applied voltage to the cis-side was negative (20 mV),
increased by a factor of 3.5 as compared to the opposite polarity of the electric field. Increasing positive voltages applied to the cis-side led to a strong decrease of the on-rate constant (
), whereas the off-rate constant (
) remained essentially unaffected. At voltages >+50 mV no binding /translocation of chloroquine could be detected (see Table 4). In contrast, adding chloroquine to the cis-side, and applying positive voltages to the same side, resulted in increasing
values, reaching a voltage independent plateau value at voltages >+50 mV. These data strongly argue for a voltage-dependent permeation of chloroquine through the PA-channel when it is added to the cis-side of the membrane. In addition, we could show that the asymmetric binding properties of chloroquine cannot be explained by the orientation of the applied electric field alone, because binding of chloroquine to PA63 was clearly more asymmetric (factor of 40) than the effects created by the orientation of the applied electric field.
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| DISCUSSION |
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-toxin of S. aureus, which forms also a heptamer with some sort of vestibule on the cis-side (Song et al., 1996
In this study we performed titration experiments with 4-aminoquinolones: chloroquine, quinacrine, and fluphenazine and found an even higher affinity of these compounds to PA63 as compared to C2II (see Table 2). The affinity increased in the series chloroquine, quinacrine, and fluphenazine at 1 M KCl. The reduction of the ionic strength to more physiological conditions (150 mM), increased the stability constant further and the half saturation constant for quinacrine binding was
81 nM under these conditions. The drastic increase of stability constants at low ionic strength might be caused by an interaction between oppositely charged groups localized at quinacrine and at PA63, an interaction that is supposed to be ionic strength dependent. The strongest effect was observed for quinacrine; its stability constant increased by a factor of
16 as compared to measurements performed in 1 M KCl.
It has to be noted that all of the substances listed above are commonly applied drugs and the concentrations used in our experiments are in a range that should allow therapeutical treatment to inhibit in vivo intoxication of cells by anthrax toxin. Quinacrine, for example, is used to treat giardiasis, a protozoal infection of the intestinal tract, and certain types of lupus erythematosus, an inflammatory disease that affects the joints, tendons, and other connective tissues and organs. Specific in vivo experiments for testing the inhibition of anthrax toxin-mediated intoxication of macrophage-like cells by 4-aminoquinolones are planned in future.
Evaluation of the stability constant of chloroquine binding to PA63 under asymmetric conditions
Recombinant PA63 reconstitutes into membranes in a fully oriented way as shown here and elsewhere (Blaustein and Finkelstein, 1990a
). The channels are presumed to be heptameric "mushrooms", with an extracellular "cap" region and a membrane-inserted, ß-barrel "stem". In artificial bilayer experiments the "cap" region is orientated to the cis-side of the membrane, the side where the protein was added. To investigate whether the binding of chloroquine to PA63 was dependent on the orientation of the channel, we performed titration experiments where chloroquine and PA63 were both added to the cis-side of the membrane. The stability constant for chloroquine binding to the cis-side of PA63 was approximately the same as when it was added to both sides of the membrane and a K of 56,300 1/M was obtained (1 M KCl). The addition of chloroquine to the trans-side of the membranes resulted in a drastic lower affinity for the PA63-channel. In this case, K was
1900 1/M in 1 M KCl. This means that the PA63-channel exhibits considerable asymmetry for the binding of chloroquine. Interestingly, no significant asymmetry was detected for other 4-aminoquinolones like fluphenazine. Experiments in which the orientation of the applied electric field was varied, revealed a certain effect on chloroquine binding to PA63, but could not explain the highly asymmetric binding of chloroquine to PA63. It is noteworthy that it was impossible to study the voltage dependence of 4-aminoquinolone binding to PA for potentials more negative than 20 mV at the cis-side because of channel closure.
It has to be noted that similar experiments with symmetric tetraalkylammonium (TAA) ions have been performed by Blaustein et al. (Blaustein and Finkelstein, 1990a
; Blaustein et al., 1990b
). Symmetric quaternary ammonium ions block the PA-channel in a voltage-dependent fashion (at micromolar concentrations), when added to either the cis- or trans-compartment. The authors stated that TAA ions are permeable and driven through the channel by large voltages of the appropriate sign. These blockers were more potent from the cis-side because
20-fold higher concentrations were needed on the trans-side to achieve comparable effects.
On- and off-rate constants for ligand binding to the PA-channel
Based on the titration experiments we suggested that channel block by the different ligands occurs in an association-dissociation reaction. Like porins of Gram-negative bacteria or channel-forming toxins (e.g., C2II from C. botulinum), the open PA63-channels exhibit 1/f noise that is probably related to the structure of the heptameric channel and may be caused by transient changes of the channel structure that is not controlled by a chemical reaction and has nothing to do with ligand binding (see Fig. 3) (Nekolla et al., 1994
; Wohnsland and Benz, 1997
; Bezrukov and Winterhalter, 2000
). The addition of 4-aminoquinolones leads to a complete change of the spectral density S(f) of current noise, which is given by a so-called Lorentzian function of the frequency f.
The analyses of the Lorentzians allow the evaluation of the rate constants and the stability constants for ligand binding to the PA63-channel. The corner frequency
is a function of the ligand concentration, which allows the calculation of rate constants of binding to the site in or near the channel based on a simple chemical reaction for ligand binding. We did not observe any indication for the binding of more than one ligand molecule at the same time to the binding site, i.e., the occurrence of two Lorentzians. The existence of one binding site for symmetric TAA ions inside the PA63-channel has been proposed by Blaustein et al. (Blaustein and Finkelstein, 1990a
; Blaustein et al., 1990b
). Blaustein and Finkelstein (1990a)
interpreted the diffusion-controlled binding of TAA to the PA63-channel with a simple two-barrier, single-well model of the channel. We are therefore convinced that this simple model provides a good description of ligand binding to the PA63-channel and of the blockage of the ion movement by their binding.
The core scaffold of 4-aminoquinolones can be divided into three different subunits (a, b, and c). There is a bicyclic (chloroquine) or tricyclic (quinacrine, fluphenazine) moiety (a) containing one or two heteroatoms and at least one substituent. This ring system is linked through an alkyl spacer (b) to a basic moiety (c) (see Fig. 2). Previous experiments clarified that for an adequate binding the positively charged ammonium group and the bulky ring system play an important role (Bachmeyer et al., 2003
). The on-rate for the binding of the different ligands to the PA63 was between 1.4 x 107 1/(M x s) and 4.2 x 107 1/(M x s) in 1 M KCl, which means that it did not vary much with the structures of the different ligands. When the ionic strength was decreased to 150 mM the on-rates were between 14 x 107 1/(M x s) and 36 x 107 1/(M x s) again exhibiting only minor differences. Obviously the ionic strength has a much higher effect on the on-rate of ligand binding than their structure. These results suggest that the high on-rate of binding for all ligands is already close to that of diffusion-controlled reaction processes (Eigen et al., 1964
).
In contrast to the on-rate the off-rate of the binding of the different ligands showed much higher variations and increased from fluphenazine (14 s1) over quinacrine (17 s1) to chloroquine (971 s1). These data illustrate that for increasing size of the different ligands
decreased. Highest off-rates were obtained with compounds that have only two conjugated aromatic rings at the side chain. From those with three conjugated aromatic rings fluphenazine with a trifluoromethyl group at the ring structure has the smallest off-rate in 1 M KCl. This means also that the ligands should be permeable through the channel, otherwise it cannot be understood why they block the channel from both sides. The asymmetry for chloroquine binding that was observed in experiments where it was only added to one side of the membrane may be explained by the assumption that the molecules diffusing through the channel can leave more easily the binding site on the cis-side of the channel because of the high off-rate. The membrane-spanning domain of PA comprises the residues E302S325 with a conserved pattern of alternating hydrophobic and hydrophilic amino acids and a total quantity of three negatively charged residues orientated toward the channel lumen (E302, E308, and D315). Site-directed mutagenesis of negatively charged residues located in the membrane-spanning region did not show any significant effect on 4-aminoquinolones binding to the C2II-channel (Blöcker et al., 2003
). In addition, recent investigations performed with cysteine mutants of PA revealed that upon binding of MTS-ET reagents to mutated PA binding of the positively charged channel blocker tetrabutyl ammonium (TBA) from the trans-side of the protein is blocked. Nassi and co-workers (Nassi et al., 2002
) demonstrated that after S349C mutant channels had reacted with MTS-ET, subsequent addition of TBA to the cis-side produced the usual 3.5-fold decrease in conductance, whereas the MTS-ET reaction prevented trans-TBA from producing its usual twofold decrease in conductance. This result suggested that the TBA binding site is located somewhere in the cap region of the PA63 protein.
To summarize we conclude, that, like for C2-toxin, the vestibule of the PA63 on the cis-side contains the negatively charged residues that are involved in binding of 4-aminoquinolones. Fluphenazine, which has a higher affinity to the binding site, has a much smaller off-rate, which means that the molecules diffusing through the channel are caught at the binding site in the vestibule, thus increasing the effective concentration at this point. The off-rate constants were only a little dependent on the ionic strength in the range between 150 mM and 1 M KCl. Only for the experiments with quinacrine in 150 mM KCl a substantial decrease of the off-rate (9.6 s1) was observed. This observation agrees well with measurements performed with C2II-toxin where a significant decrease of
was only observed at 20 mM KCl (Bachmeyer et al., 2003
) suggesting that ionic strength effects influence also the off-rate of ligand binding to a small extent (Blöcker et al., 2003
).
Voltage-dependent block of PA-channels by chloroquine
Increasing positive voltages applied to the cis (chloroquine-containing) side of the membrane led to somewhat increasing on-rates, reaching a voltage-independent plateau value of
74 x 106 M1s1 at +50 mV. This could be caused by diffusion limitation as pointed out above. These considerations support our view that the binding site for the 4-aminoquinolones is localized in the vestibule of the PA-channel.
In contrast, addition of chloroquine to the trans-side and application of high positive voltages to the cis-side, led to a decrease of on-rates and blocking of PA was abolished at positive voltages >50 mV. In this case, membrane voltage influenced both on-rate and stability constant of binding but not the off-rate, presumably because the compounds have to diffuse through the channel against the electric field to reach the binding site in the vestibule.
| CONCLUSIONS |
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In this study, we present a novel group of potent channel blockers, which can block the PA63-channel in vitro at micromolar concentration, thus providing a potential medical treatment for systemic anthrax infection. 4-Aminoquinolones are commonly used medicaments in the treatment of a variety of different diseases from malaria (chloroquine) to protozoal infection of the intestinal tract (quinacrine). Although it is still an open question if the channel lumen provides the pathway for the translocation of the enzymatic components, it could be shown for C2II that blockage of the channel inhibits in vivo intoxication of Vero cells (Bachmeyer et al., 2001
). In this study, we provide evidence for the existence of one binding site inside the vestibule of the PA63-channel for chloroquine, fluphenazine, and quinacrine. The binding kinetics of ligand binding to PA63 could be resolved by the ligand-induced current-noise analysis, resulting in on-rates that were dependent on the ionic strength of the aqueous phase and off-rates depending mainly on the structure of the ligand. The nonlinear relationship between single-channel conductance and KCl concentration and the high ligand affinity to PA63 at low ionic strength could be both explained by the existence of discrete negative charges inside the PA63-channel.
| ACKNOWLEDGEMENTS |
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This work was financially supported by the Deutsche Forschungsgemeinschaft (SFB 487, project A5) and the Fonds der Chemischen Industrie.
Submitted on July 23, 2004; accepted for publication November 24, 2004.
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