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* Max Planck Institute for Polymer Research, 55128 Mainz, Germany;
Department of Chemistry, University of Florida, Gainesville, Florida 32611; and
Research Center Jülich, 52425 Jülich, Germany
Correspondence: Address reprint requests to Dr. Ingo Köper, E-mail: ingo.koeper{at}mpip-mainz.mpg.de.
| ABSTRACT |
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| INTRODUCTION |
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Recently, we developed a promising system with good electrical sealing properties. Due to high electrical resistance of the membrane, several membrane proteins were successfully incorporated and characterized in a functional form (6
,10
12
). For biosensing applications, it is interesting to combine the biological system of a membrane with a (micro-)electronic read-out system. These systems are mostly based on silicon technology. For example, the simplest gate structure of a nonmetallized field-effect transistor for operation in electrolytes consists of a thin layer of silicon oxide. So far, transistors have been used to study membrane-related processes by attaching giant vesicles to the transistor (13
) or by fusion of vesicles to a silicon oxide substrate (14
). We aimed to construct a tBLM on a silicon oxide surface based on the archaeal lipid analog used previously on gold substrates, by transforming the anchor chemistry from a thiol to a silane. A tethered self-assembled monolayer (SAM) was formed by self-assembly on silicon oxide surfaces. Vesicles were then fused to complete the assembly to an electrically sealing bilayer.
The high resistance of the SAM allowed the electrical verification of the functional incorporation of membrane proteins. We have been able to incorporate both the ion carrier peptide valinomycin and the well-known antibiotic model pore gramicidin. Functionality of both molecules has been shown by a decrease of the membrane resistance upon incorporation. The concentration dependence and ion selectivity of both valinomycin and gramicidin were demonstrated. These systems have been studied in detail before; however, they have been incorporated either in mechanically instable black lipid membranes or in supported membranes with, in most cases, much lower membrane resistances (15
18
).
| SYNTHESIS AND IMMOBILIZATION OF DPTTC AND DPTDC |
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The basic synthetic route is depicted in Scheme 1. The lipids utilized in this study have two phytanyl chains connected to the tetra(ethylene glycol) tethered spacer via a glycerol unit. Phytanyl chains were chosen as hydrophobic tails instead of alkyl chains because of their low phase-transition temperature and their influence on the density and stability of biological membranes (8
,19
). Furthermore, the 2,3-di-O-phytanyl-sn-glycerol unit contains only ether linkages to prevent hydrolytic cleavage (20
). This moiety is known to form stable biomembranes under the extreme living conditions (e.g., high temperatures) of extremophiles or archaea (21
).
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DPTTC and DPTDC are immobilized on SiOx surfaces by immersing the substrate into a dilute (typically 240 mM) solution of either DPTTC or DPTDC in dry toluene. A few drops of dry Et3N are added to quench the coproduct HCl and to promote the reaction (27
,28
). It should be emphasized that the difference between immobilization procedures of both lipids occurs within a thin water layer adsorbed to the substrate. This is required in the case of DPTTC. In the case of DPTDC, the covalent binding between the lipid and the substrate occurs after a condensation reaction of the monochlorosilane anchor group with the hydroxyl groups available on the silicon-oxide surface. In contrast, the commonly assumed mechanism for a trichloropropyl-silane anchor group as in DPTTC consists of three distinct phases: 1), the trichlorosilane groups are hydrolyzed by the water layer on the substrate surface, 2), the chains are then bound via hydrogen bonds to the surface and to their neighbors, and 3), this (unstable) situation is followed by water elimination leading to a network in which each lipid is linked to the surface and to the neighbors (Fig. 1) (29
). However, one should notice that the image in Fig. 1 is idealized. In fact, the data presented in this work suggest that the actual packing density is less dense and that the layer is thinner than suggested by the figure.
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| METHODS AND MATERIALS |
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Substrates
We used highly p-doped silicon wafers (diameter 3'', orientation
100
, boron-doped 0.0050.002
cm) to fabricate the electrolyte-insulator-semiconductor chips. High doping is favorable because it increases the threshold voltage of the electron inversion layer, which acts as an interfering capacitance in the electrochemical impedance spectroscopy (EIS) experiments. Accordingly, we did not oxidize the wafer further but retained the native oxide layer. A thin oxide layer has a high capacitance, which ensures that the measured impedance is dominated by the smaller capacitance of the bilayer in series (14
). The backside contact is made by evaporation of 250 nm aluminium followed by a temper step (N2, 400°C, 10 min). Finally, the wafers were cut into squares of 9 mm x 9 mm to fit the experimental set up.
Cleaning procedure
Before use, the Si wafers were cleaned thoroughly to increase the surface coverage of OH groups on their surface. A typical cleaning procedure was ultrasonification (US) in pure water (MilliQ, R > 18 M
cm) for 10 min, US in a 1:1 mixture of acetone:ethanol for 10 min, 300 W plasma cleaning (0.9 mbar argon/0.1 mbar oxygen) for 5 min, and US in MilliQ for 10 min. If necessary, the samples were stored in MilliQ. After such a cleaning procedure, the water contact angle was below 10°, the thickness of the oxide layer as determined by ellipsometry was 18 ± 5 Å, and the root mean-square roughness determined by atomic force microscopy (AFM) was 2.0 ± 0.5 Å (from a 5 µm x 5 µm area, roughness from features smaller than 10 nm is probably not resolved by the AFM tip).
Electrochemical impedance spectroscopy
Electrochemical impedance spectroscopy (EIS) measurements were conducted using an IM6 spectrometer from Zahner Electrics (Hannover, Germany). Spectra were recorded for frequencies between 10 mHz and 1 MHz at 0 V potential with an AC modulation amplitude of 10 mV. Raw data were analyzed using the ZVIEW software package (version 2.70, Scribner Associates, Southern Pines, NC). Standard three electrode measurements were performed in Teflon cells with the substrates as the working electrode, a coiled platinum wire as the counter electrode, and a DRIREF-2 reference electrode (World Precision Instruments, Sarasota, FL). The home-built Teflon cells have a buffer volume of 0.5 ml and an electrochemically open area on the substrates of 0.385 cm2. The data were fitted using an equivalent circuit consisting of a feed resistance and two RC elements (a resistance connected in parallel to a capacitance) in series (see Fig. 3 B). The fitted values are normalized to the electrode surface area.
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45 N/m and resonant frequencies of
300 kHz have been used. The roughness is determined from topographs recorded in tapping mode.
Ellipsometry
Ellipsometric measurements were carried out using an EP3 imaging ellipsometer from Nanofilm (Göttingen, Germany) with a
= 532 nm laser source. The angle of incidence was 70° for measurements in air, 60° for measurements in a fluid cell. Thickness values were fitted with the EP3View V2.01 software using a layer model with the following parameters: n = 4.17 and k = 0.049 for Si, n = 1.4605 and k = 0 for SiOx, n = 1.50 and k = 0 for the self-assembled monolayers (SAM), and n = 1.45 and k = 0 for the bilayer (6
). SAM thicknesses were determined by comparing results before and after the growth of the layer.
Immobilization of DPTDC on SiOx surfaces (SAM preparation)
DPTDC was immobilized on the SiOx surface of a silicon wafer at room temperature from toluene solutions using Et3N as promoter and acid scavenger. The substrates were dried by vacuum firing and immersed in an assembly solution. The SAMs were typically assembled within 24 h. The samples were then cleaned by rinsing extensively and ultrasonified 5 min in toluene, toluene:ethanol = 1:1 and ethanol, followed by rinsing with chloroform.
Immobilization of DPTTC on SiOx surfaces (SAM preparation)
The procedure is essentially the same as for DPTDC, except that the silicon wafers were not dried before assembly (a water layer on the substrate surface is required).
Vesicle fusion (tBLM and sBLM preparation)
Bilayers were grown on the substrates by insertion of 0.2 mM DPhyPC (1
,2
-diphytanoyl-sn-glycero-3-phosphocholine) vesicles (50 nm Ø by extrusion in MilliQ) into the electrochemical cells with a buffer of typically 100 mM KCl. For tBLM preparations, substrates previously treated with DPTDC and DPTTC were used. Supported bilayer lipid membranes (sBLM) were assembled by using cleaned but untreated substrates where the vesicles directly interact with the hydrophilic silicon oxide layer.
Incorporation of valinomycin and gramicidin
Valinomycin and gramicidin were dissolved in ethanol (2 mg/ml and 5 ng/ml, respectively) and added to the preformed bilayer. Incorporation was allowed for 1 h. The final concentration of valinomycin in the cell was 18 µM, the concentration of gramicidin was varied as described below between 20 and 1000 nM.
| RESULTS AND DISCUSSION |
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20% decrease of the capacitance of the oxide layer due to the additional thickness of the SAM.
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Growth and electrochemical properties of the lipid bilayer
Impedance spectra of the substrates with an attached SAM can be analyzed by an equivalent electrical circuit consisting of a feed resistance and an RC element (a resistance connected in parallel to a capacitance) describing the oxide/SAM layer. After vesicle insertion, a second RC element forms within a few hours with a rapid drop in capacitance and a steady increase in resistance. The bilayer formation is usually completed within 24 h as determined from a saturation of the bilayer resistance. The two RC elements corresponding to the oxide layer and the tethered bilayer, respectively, can be easily distinguished in the combined impedance and phase Bode plot is shown in Fig. 3 A. The logarithm of the absolute value of the impedance (left ordinate) and the phase angle (nonlogarithmic, right ordinate) are plotted versus the logarithmic AC modulation frequency. In such a log-log plot, resistively dominated frequency regions are horizontal with zero phase and capacitive dominated frequency regions have a slope of 1 and are out of phase by 90°, with higher capacitance shifting the curve to lower frequencies. Accordingly, the measurement after bilayer growth reveals a flat impedance with low phase at high frequencies (>10 kHz) where the solution resistance dominates the current response, a rising impedance of slope 1 and out of phase in the broad midfrequency region where the capacitance of the oxide layer and the bilayer in series dominate, and the low frequency region (<0.1 Hz) where only the capacitance of the oxide layer persists. The last two regions are separated by a transition shoulder region with lower phase which manifests the resistance of the bilayer. The data can be fitted with good agreement using the equivalent circuit shown in Fig. 3 B.
The average bilayer resistances and capacitances, determined from 10 different samples, are 1.45 ± 1.06 M
cm2 and 888 ± 36 nF cm2 for DPTDC, and 0.5 ± 0.3 M
cm2 and 782 ± 26 nF cm2 for DPTTC, respectively. The bilayers are stable over more than a week and are robust upon rinsing.
Compared to supported bilayers, where bilayer resistances were usually lower by more that one order of magnitude, the relatively high bilayer resistances of
1 M
cm2 in the case of the tBLM architectures suggest a partial filling of the lightly packed proximal bilayer leaflet by lipids from the vesicles.
The difference between the two systems (DPTDC and DPTTC) can be explained with a different monolayer structure or packing density as can be seen from the different hydrophobic character of the surface (Fig. 2). However, both systems show reasonably good electrical sealing properties to be used as a biomimetic membrane.
We also studied the kinetics of the bilayer formation by ellipsometry using a liquid cell filled with MilliQ water. The growth of the bilayer after vesicle insertion on a bare substrate and on a DPTTC covered substrate can be compared in Fig. 4. The drop in
is more pronounced for the SAM covered sample corresponding to an overall thicker bilayer system. A simple layer model assuming a constant refractive index of n = 1.45 for the whole bilayer system yields a bilayer thickness of
2 nm for the supported bilayer and
4 nm for the tethered bilayer. These bilayer thicknesses are too low compared to the calculated lengths of the molecules involved in the bilayer formation (Fig. 1). This might be due to shortcomings of the model and difficulties in the measurement because of proximate refractive indices of the different layers (n = 1.4605 for SiOx, n = 1.45 for the bilayer, and n = 1.33 for water).
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The first test on functionality of the membrane was the addition of valinomycin, a small ion carrier peptide. Valinomycin spontaneously partitions into the membrane and selectively transports K+ ions from one side to the other (9
,17
). Thus, one can expect a strong decrease in the bilayer membrane resistance with an increasing potassium ion concentration in case the protein is functionally incorporated.
Fig. 5 shows the EIS data from a DPTDC-based tBLM with incorporated valinomycin using buffer solution of different compositions of Na+ and K+ ions at an ionic strength of 100 mM. Fig. 5 A compares Bode plots (solid circle) before vesicle fusion (upward triangle), after vesicle fusion, valinomycin incorporation, and in a mixed KCl/NaCl buffer, and (downward triangle) after rinsing with a pure NaCl buffer. To better visualize the difference in the bilayer impedance, we have replotted the curves by normalizing them to the curve before vesicle fusion (lower part of Fig. 5 A). This procedure yields the ratios of the impedances of the different curves. It can be seen that the bilayer increases the impedance by a factor of 2.5 in the midfrequency region. For the bilayer with the active valinomycin, this factor is reduced again to only 1.25 at lower frequencies. The data can be approximately fitted using the simple R-RC-RC equivalent circuit as discussed above. The obtained values for the bilayer resistances and capacitances from different potassium ion strengths are plotted in Fig. 5 B.
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As a control, electrolyte solutions with different NaCl/KCl concentrations at 100 mM ionic strength show no significant effect on the electrical properties of a protein-free bilayer.
As a second test on the functionality of the membrane, we incorporated gramicidin into the bilayer. Gramicidin is a polypeptide with alternating D and L amino acids. In lipid bilayer membranes, gramicidin dimerizes and folds as a right handed ß-helix to form an ion channel that just spans the bilayer (30
,31
). Whereas K+ and Na+ ions penetrate the channel, other ions like the bigger tetramethylammonium ((CH3)4N+) or ammonium (
) ions are excluded (32
). This effect has already been proposed to be used in a biosensing concept (33
35
). However, most of the approaches are based on black lipid membranes that lack mechanical stability. Supported systems, on the other hand, do not give highly insulating membranes. In our approach, we are now able to combine the stability of a tethered membrane with a highly insulating bilayer, which can be used for biosensing applications on semiconductor chips.
Fig. 6 A shows the Bode plot for a bilayer built on a DPTTC monolayer in 100 mM KCl before and after addition of gramicidin to the buffer and after rinsing with tetramethylammoniumchloride solution. The data are fitted using the same approach as above. The decrease of the bilayer resistance from 540 k
cm2 to 13 k
cm2 can be attributed to the incorporation of the gramicidin channels. This interpretation is affirmed by the strong increase of the bilayer resistance to 1.8 Mk
cm2 after rinsing with tetramethylammoniumchloride solution. This resistance is even higher than the original bilayer resistance in KCl solution before gramicidin incorporation. This shows the influence of the different ion sizes and mobilities on the bilayer resistance. In control experiments, we find that membrane resistances in tetramethylammonium-chloride solution increase by a factor of
2 with respect to membranes in KCl solutions. The changes due to gramicidin incorporation are thus much more pronounced.
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1000 pM. At the same time, the bilayer capacitance is constant at 780 nFcm2. For gramicidin concentrations below 500 pM, this drop in the bilayer resistance can be reversed by rinsing with a 100 mM (CH3)4N+Cl buffer. For higher gramicidin concentrations, the bilayer resistance is reduced further until complete disappearance; also the initial bilayer resistance can no longer be regained by exchanging the buffer. This phenomenon could be due to permanent perturbation of the bilayer caused by a large amount of integrated protein molecules. | CONCLUSION |
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cm2. These values are still lower than those of the similar thiol-based system (6Functionality of the membrane could be shown by the incorporation of two different membrane ionophores, the ion carrier valinomycin, and the ion channel gramicidin. We have shown the incorporation of valinomycin into a DPTDC and of gramicidin into a DPTTC system, respectively. One should notice that both systems could be functionalized with the respective other membrane transporter as well.
The coupling of artificial membrane systems to silicon oxide surfaces offers a way to combine the biological system of a membrane to the microelectronics world of silicon technology.
| ACKNOWLEDGEMENTS |
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This study was supported by the Defense Advanced Research Projects Agency in the MOLDICE program. I.K. acknowledges support from the Laboratoire Européen Associé on "Polymers in Confined Geometries".
Submitted on February 23, 2005; accepted for publication June 2, 2005.
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