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Department of Chemistry, University of British Columbia, Vancouver, British Columbia V6T 1Z1, Canada
Correspondence: Address reprint requests to Suzana K. Straus, Tel.: 604-822-2537; Fax: 604-822-2157; E-mail: sstraus{at}chem.ubc.ca.
| ABSTRACT |
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| INTRODUCTION |
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-helical in structure and form ion channels in microbial cell membranes in response to changes in transmembrane potential (reviewed in Jen et al. (1
The insertion of alamethicin (and other antimicrobial peptides) into the membrane depends upon several factors, such as peptide/lipid (P/L) molar ratio, elasticity and structure of the bilayer, and physiological factors (e.g., degree of hydration) of the bilayer. In the case of the concentration (P/L), alamethicin has been specifically found to have a sigmoidal concentration dependence (6
). That is, at very low P/L molar ratios, the S state is observed. However, above some critical threshold peptide concentration (P/L*) insertion of a fraction of the molecules occurs, and some lytic activity is detected (11
,2
). As the P/L ratio is increased, a coexistence region between the S and I states is observed, until the I state is eventually reached at very high P/L (7
,10
,13
). It is worth noting that cytolytic activity may also be induced experimentally in the S state by applying a transmembrane voltage rather than increasing the P/L ratio (14
). Much of this previous work has focused on determining the threshold P/L* value for alamethicin in various types of membranes under different physiological conditions to better explain the specificity of antimicrobial peptides for selected microbes (6
,7
,15
,16
). All these studies have been carried out using ester-linked phospholipid bilayers.
The aim of this study is to extend this work to lipid bilayers which have different properties (e.g., phase, bilayer thickness), namely ether-linked lipids. More specifically, we have chosen to investigate the concentration dependence of alamethicin in the ether-linker lipid di-hexadecyl phosphocholine (DHPC), which exists in an interdigitated phase at ambient temperature in the absence of any inducer (17
19
). Such interdigitated bilayer structures have attracted considerable interest because of the different bilayer structures they can form and their possible implications for membrane function. In addition, ether-linked phospholipids have recently attracted much attention as a platelet-activating factor (20
). They have also displayed antitumor activity and have been found to be the major lipid of archaebacterial membranes (21
). From an NMR point of view, these types of lipids are also of interest as they do not possess any carbonyl moieties, which can be advantageous when studying membrane-interacting peptides, since the signal in the 180170 ppm region of a 13C spectrum would then arise solely from the peptide (22
,23
). Finally, ether-linked lipids can be used to form bicelles (24
26
).
To characterize the state (I or S) of alamethicin in DHPC, a combination of oriented circular dichroism (OCD), 31P solid-state NMR, and differential scanning calorimetry (DSC) data were collected and analyzed. Each of these methods has been used to characterize the interaction of membrane-bound peptides with lipids in complementary ways. OCD spectroscopy can be applied to helical peptides bound to oriented planar phospholipid bilayers and thereby provide a direct measure of the orientational distribution of helices with respect to the incident light beam (7
). The technique has proven particularly useful for tracking changes in alamethicin orientation which can occur in response to changes in peptide surface density, bilayer hydration, acyl-chain saturation, or lipid phase (4
,5
,7
,27
). 31P solid-state NMR can be used to probe the degree alignment of lipid bilayers and the mobility of lipid headgroups, by using mechanically aligned phospholipid bilayers on glass plates (28
30
). Using 31P and 15N NMR, for instance, Bechinger et al. (28
) demonstrated how the insertion of alamethicin and the related peptaibol, zervamicin, depends on the hydrophobic thickness of the lipid bilayer relative to the peptide length. Finally, DSC is a powerful thermodynamic technique for probing the nature and stoichiometry of lipid-peptide interactions and for providing information about the location and aggregation state of peptides and their lipid-bound state (31
). It has been used to probe phase transitions of pure phospholipids (32
,33
) and perturbations induced by lipid-interacting peptides (34
36
). For instance, DSC studies carried out for multilamellar vesicle (MLV) samples composed of phospholipids isolated from Thermoplasma acidophilum and alamethicin have shown that the peptide broadens the lipid phase transition of the main phospholipid from T. acidophilum (37
). Moreover, alamethicin was found to interact primarily with the lipid headgroups and to readily incorporate into the tetraether lipid structures.
Results from these three types of experiments applied to alamethicin in DHPC allow us to propose a mode of insertion of this peptaibol in an interdigitated ether-linked phospholipid for the first time. Comparison to the insertion of alamethicin in ester-linked membrane bilayers, in gel (1
,2
-dipalmitoyl-sn-glycero-3-phosphatidylcholine (DPPC)) or the L
phase (1-palmitoyl, 2-oleoyl-sn-glycero-3-phosphatidylcholine (POPC)) at room temperature, is also made.
| MATERIALS AND METHODS |
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Mechanically oriented sample preparation
For circular dichroism spectra, 0.5 µmol alamethicin (4 µL of stock solution) was mixed with the appropriate quantity of DPhPC, DHPC, or DPPC, already fully dissolved in 1:1 methanol/chloroform, in a 25 mL round bottom flask. The contents of the flask were sonicated for 10 min, and the resulting solution was dried under a stream of N2 to produce a clear layer which coated the bottom of the flask. The sample was then vacuum dessicated overnight at room temperature to ensure that any residual solvent was removed. After drying, the sample was hydrated with 2 ml deionized water to yield a peptide concentration of 0.25 mM and sonicated until all lipid and peptide were fully dissolved. To prepare solution samples at a 1:30 P/L molar ratio, an 8x dilution was made of the appropriate hydrated solution. The diluted solution was used to measure solution circular dichroism in a clean quartz cuvette with 1.0 mm path length (d). To prepare oriented samples, 90 µL of the hydrated sample was deposited onto a clean quartz slide (the quartz slides had been thoroughly cleaned with both water and ethanol and allowed to air dry repeatedly) which measured 3 x 1 cm with thickness of 1 mm. Each slide was fitted with a spacer of thickness
1 mm which formed a
2 mm-wide frame around the slide. Spacers were made of six layers of stacked parafilm. The hydrated sample was deposited on each slide in small droplets via a syringe, ensuring that the mixture covered the entire surface area of the slide. This method resulted in the formation of oriented multilayers (38
). Slides were then incubated overnight in a sealed dessicator at 93% relative humidity and 37°C. When removed from the incubator, the hydrated sample was present on the slide as a clear gel-like layer. A clean second, dry quartz slide was placed on top of the parafilm spacer on the first slide and pressed firmly against it. For the NMR experiments, samples were prepared using the same procedure as described above, except that the sample was spread onto 20 glass slides (11 x 11 mm) and 13 mg of alamethicin was used.
Unoriented sample preparation
An aliquot corresponding to 25 mg of the appropriate lipid dissolved in chloroform was deposited into a test tube, along with the alamethicin. The chloroform was then removed using N2 gas for 1520 min. The test tube was placed in a vacuum dessicator overnight to remove any residual solvents. The lipid mixture was resuspended in 100 µL water by heating in a water bath at 50°C. Once all the phospholipids were fully dissolved, the MLV sample was transferred to an NMR rotor. For the T1 measurements, the samples were prepared using 50% (w/w) lipid, 50 mM TRIS buffer, pH 7.4, to which 1 mM EDTA was added, as outlined in Tamm and Seelig (39
).
OCD spectroscopy
Circular dichroism measurements were made on a Jasco (Easton, MD) J-810 Spectrometer at 20°C and 50°C. At the latter temperature, samples were equilibrated for a minimum of 2030 min before data acquisition. The spectra were acquired over a wavelength range of 250190 nm, using 0.5 nm steps and a scan speed of 100 nm/min. To obtain an increased signal/noise ratio, each recorded spectrum was the average of three scans. Measurements were made with the incident light normal to the substrate surface (7
). The light passed through a circular chasm 1 cm in diameter before reaching the quartz slide. The acquired spectrum did not change after lengthwise rotation of the quartz slide by 180°, indicating that neither spectral artifacts in the quartz nor inhomogeneities in the sample were contributing significantly to the spectra. Any contribution of the lipids to each spectrum was corrected for by subtracting a background spectrum, containing only lipid, from the spectrum obtained for the peptide-containing sample.
NMR spectroscopy
31P NMR spectra were recorded on a Varian (Palo Alto, CA) 400-MHz NMR spectrometer operating at 161.80 MHz using a static double resonance flat coil (11 x 11 mm) probe for mechanically aligned bilayer samples and a Varian triple resonance TXI MAS probe equipped with a 4 mm diameter rotor for the MLV samples. The 31P NMR spectra were recorded with 1H decoupling using a 4.2 µs
/2 pulse and a 3 s recycle delay. For the 31P NMR spectra, 1024 scans were taken and the free induction decay was processed using 100 Hz of line broadening. The spectral width was set to 50 kHz. The spectra for the aligned samples were repeated three times (i.e., using three different samples) for each P/L ratio to ensure that the spectra were reproducible.
Phosphorus T1 measurements were performed using an inversion-recovery pulse sequence
-
-
/2 with proton decoupling and with a recycle time of 3 s (40
,41
) (see Supplemental Material for spectra). To first approximation, the inversion recovery of the whole powder pattern could be described by a single T1 value. Consequently, the T1 values were determined at the chemical shift value of 16 ppm for the MLV samples.
Differential scanning calorimetry
MLVs of DHPC, DPPC, DPhPC, 1:15 alamethicin/DHPC, and 1:80 alamethicin/DHPC, with a final lipid concentration of 25 mg/ml were prepared by dissolving the desired lipid in chloroform. The lipid samples were then dried under a stream of nitrogen and then further dried under vacuum overnight to remove any residual solvent. Alamethicin was added to the dried lipid sample at the desired P/L molar ratio. The samples were then resuspended with a buffer containing 20 mM HEPES pH 7.0 and 100 mM NaCl. The resuspended samples were vortexed vigorously three times while heating the sample above the phase transition peak (44°C45°C) for 5 min in between each vortex step. The buffers and lipid samples were degassed for 5 min before loading the sample into a MC (multicell)-DSC (Calorimetry Sciences, South Provo, UT), located at the University of British Columbia Centre for Biological Calorimetry. The samples were heated and cooled between a temperature range of 5°C90°C at a heating (cooling) rate of 0.333°C/min. The resulting data were converted to molar heat capacity and baseline corrected by subtracting a blank buffer scan. Each experiment was repeated at least twice to ensure reproducibility of the results.
| RESULTS AND DISCUSSION |
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1:80) at 20°C. This difference can be attributed to the different properties of these lipids. More specifically, recent experiments have shown that membrane thinning is the cause for sudden insertion of alamethicin in the lipid bilayer above the critical P/L* (7
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22°C24°C), whereas DPPC lipid bilayers are in gel phase. The hydrophobic length of alamethicin is 22 Å, whereas the distance between the phosphate groups, dp-p, is 42 Å for DPPC bilayers and 31 Å for DHPC bilayers, at room temperature (43
Based on the OCD results, membrane thinning would therefore occur at different P/L ratios for alamethicin in DPPC versus DHPC, as a result of hydrophobic mismatch. The free energy cost of such thinning, which causes headgroup deformation, increases quadratically with the P/L. At some critical P/L*, the energy cost of thinning exceeds the energy for insertion, and the inserted state becomes favored at higher P/L ratio (5
,10
,16
,46
). Studies of lipid motility by fluorescence anisotropy report a marked instability or "wobbling" of lipid hydrocarbon chains as the P/L approaches P/L*, indicating that both headgroups and hydrocarbon tails are distorted as a result of membrane thinning (14
). Our results from 31P aligned spectra support this increase in deformation of the headgroup with increasing alamethicin concentration (vide infra).
To further characterize the insertion of alamethicin in DHPC, solid-state 31P NMR spectroscopy (47
) on MLV and aligned samples of alamethicin/DHPC was performed. 31P static spectra of MLV samples of DHPC were recorded as a function of increasing alamethicin concentration and temperature (data not shown). The width of the powder pattern for pure DHPC was found to be 52 ppm, in agreement with the width of 55 ppm for a DHPC bilayer at 21°C (17
). Experiments performed at 50°C, for which DHPC is in liquid crystalline phase, showed a reduced powder pattern width of 42 ppm. This and the fact that the axially symmetric spectral shape and CSA parameters agree well with previous 31P NMR studies (17
) serve to confirm that the lipid bilayers studied here are in the interdigitated-gel phase (LßI). Addition of alamethicin to DHPC (P/L ratios = 1:80 and 1:15) does not change the spectral line shape and CSA parameters of the 31P NMR spectra in any way. This indicates that the addition of alamethicin to DHPC does not lead to the formation of new phases, a result which is further confirmed by our DSC results (vide infra).
Fig. 3 A shows a proton-decoupled 31P NMR spectra of fully hydrated MLVs of pure DHPC bilayers at 25°C. In Fig. 3 B, the 31P NMR spectra of a mechanically aligned DHPC (pure) bilayer at 25°C is illustrated. The presence of a single intense peak at 35 ppm indicates that the DHPC bilayer normal is aligned parallel to the external magnetic field. Fig. 3, CG, shows the 31P NMR spectra of mechanically aligned DHPC bilayer with increasing alamethicin concentration: the P/L ratio varies from 1:90, 1:80, 1:50, and 1:30 to 1:15, respectively. The presence of an intense peak at 34 ppm indicates that a significant proportion of the DHPC membrane bilayer remains aligned even at higher peptide concentration. Comparison of Fig. 3, EG with Fig. 3 B clearly suggests that the addition of alamethicin does, however, partially disrupt the lipid orientation, as manifested by the increased intensity at 17 ppm. This peak position represents a bilayer normal alignment perpendicular to the magnetic field. At the highest alamethicin concentration (P/L ratio = 1:15), for which alamethicin is in the I state (from OCD data), an additional isotropic peak appears (at
0 ppm, Fig. 3 G), which could originate from either the formation of smaller vesicles/micelles, the formation of a different phase (e.g., cubic phase), or from toroidal pore defects within the bilayer (30
,48
).
The presence of these additional peaks (i.e., at
16 ppm and at the isotropic peak position) with increasing peptide concentration have also been observed in a number of other 31P NMR spectra of mechanically aligned bilayers of peptides incorporated into a range of lipid types. Examples include the peptide paradaxin incorporated into the DMPC or POPE lipid bilayers (29
), myelin basic protein, inserted in the POPC lipid bilayers (49
), RTD-1 incorporated into POPC, DMPC, DLPC bilayers (50
), protegrin-1 (PG-1) incorporated to POPC/cholesterol bilayers (30
), K2(LA)xK2 incorporated into mechanically aligned DCPC, DLPC, DOPC, and POPC bilayers (51
), LL37, an amphipathic, antimicrobial peptide which inserts into POPC/POPG, POPC/cholesterol, and POPE/POPG bilayers (52
), and finally MSI-78, which forms toroidal pores in POPC at concentrations of 15 mol % (53
). In some cases, the presence of these additional peaks and/or broadening of the peak shapes have been attributed to a peptide-induced lipid phase transition. In other cases, it has been attributed to a peptide-induced disordering effect of the peptide on the lipid bilayer, which may arise due to hydrophobic mismatch between the peptide and the lipid (51
). Although, as mentioned above, the 31P spectra obtained for MLV samples of DHPC/alamethicin suggest that there is no formation of a new lipid phase, we also conducted DSC experiments to determine whether alamethicin induces new phase transitions in DHPC.
Fig. 4 shows a series of DSC heating thermograms of large MLVs composed of fully hydrated DHPC, 1:80 alamethicin/DHPC, and 1:15 alamethicin/DHPC, respectively. DHPC typically undergoes two endothermic transitions upon heating: a pretransition at Tm = 34°C35°C and a large-enthalpy main transition to liquid-crystalline phase at Tm = 44°C45°C (43
). This DSC study clearly reveals that the addition of increasing amounts of alamethicin to DHPC does not induce new phase transitions. It does, however, have a small effect, by shifting the pretransition slightly and broadening the main transition. This is consistent with previously reported data for alamethicin (37
). This effect is small as compared to alamethicin in DPPC, where the thermograms reveal a phase transition temperature which is reduced slightly and a phase transition peak which is broadened extensively upon addition of alamethicin (data not shown). This is again consistent with earlier results obtained from differential thermoanalysis of DPPC in the presence of alamethicin (37
).
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100 ms at 24°C. It is consistent with the model that alamethicin interacts with a larger number of DHPC headgroups when it is in a surface associated or S state, though the large experimental error does not prove this conclusively. The decrease in T1 values with increased temperature indicates that the headgroups undergo more motion in the interdigitated-gel phase than in the liquid crystalline phase at 50°C.
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| CONCLUSIONS |
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1:80) at 20°C. This is likely due to the relative differences in the hydrophobic length of alamethicin, DHPC, and DPPC. The 31P NMR data show how alamethicin increasingly perturbs the DHPC headgroup with increasing alamethicin concentration, finally leading to additional peaks at 16 ppm and at the isotropic position. This is not accompanied by a change in phase of the lipids, as confirmed by the DSC data. Given the results, we therefore propose that alamethicin inserts into DHPC bilayers using the toroidal model. Further studies on the orientation of alamethicin in DHPC are currently underway. | ACKNOWLEDGEMENTS |
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S.K.S. acknowledges financial support from the Natural Sciences and Engineering Research Council of Canada (Discovery Grant and University Faculty Award) and UBC.
This work was presented in part at the 46th Experimental NMR Conference (ENC), Providence, RI, April 1115, 2005.
| FOOTNOTES |
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Submitted on May 30, 2005; accepted for publication July 18, 2005.
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