| HOME | HELP | FEEDBACK | SUBSCRIPTIONS | ARCHIVE | SEARCH | TABLE OF CONTENTS |
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||

* Laboratory of Cell and Computational Biology, Center for Genetics and Development, University of California, Davis, California 95616; and
Department of Physiology and Biophysics, Albert Einstein College of Medicine, Bronx, New York 10461
Correspondence: Address reprint requests to Jonathan M. Scholey, Center for Genetics and Development, Section of Molecular and Cellular Biology, University of California, 1 Shields Ave., Davis, CA 95616. Tel.: 530-752-2271; Fax: 530-752-7522; E-mail: jmscholey{at}ucdavis.edu.
| ABSTRACT |
|---|
|
|
|---|
| INTRODUCTION |
|---|
|
|
|---|
KMTs play important roles in chromatid motility, and in many systems they are very dynamic. For example, during metaphase, kMTs display dynamic instability (7
) at their plus ends and they also exhibit motor-dependent poleward flux, in which the MT polymer lattice persistently translocates poleward as tubulin subunits undergo net addition onto the dynamic MT plus ends and net dissociation from their pole-associated minus ends (8
,9
). This dynamic behavior contributes to the oscillations of congressed metaphase chromosomes along the pole-pole axis, a process called "directional instability" (10
). During anaphase A, kMTs continue to undergo poleward flux as tubulin subunits dissociate at their pole-associated minus ends, and, if subunit addition at the kt ceases or slows down, the kMTs can then shorten and drag the disjoined chromatids poleward (11
13
). In many systems, this "flux mechanism" for anaphase A is supplemented or replaced by a "pacman" mechanism, in which the kinetochores actively "chew" their way to the poles by depolymerizing kMTs at their plus ends, dragging the attached chromatids poleward (14
18
). While kMTs exert the forces that underlie both metaphase chromosome oscillations and anaphase A chromatid-to-pole motility, a second subset of MTs, the ipMTs, drive spindle elongation during anaphase B. Modifications of these basic events occur in many cell-types and there exists significant variability in the rates of chromosome motility, in the magnitude of the oscillations associated with directional instability, in the relative contributions of the flux and pacman components of anaphase A, and in the relative contributions of anaphase A and B to chromosome segregation, within different systems (11
15
,18
,19
).
The Drosophila syncytial blastoderm stage embryo (cycles 1013) is a veritable mitotic factory packed with mitotic spindles whose hallmark is rapid mitosis (14
,15
,18
,20
,21
). The syncytium contains the order of a thousand spindles lying just under the cortex that are derived from the single nucleus of the fertilized egg through a stereotypical series of mitoses and nuclear migrations. Each spindle assembles as the nuclear envelope fenestrates during prometaphase when eight pairs of sister chromatids are captured and maneuvered onto the equator of the
10 µm long metaphase spindle, where they are held in a relatively static state, displaying no obvious directional instability (Fig. 1 A) (3
,13
). Anaphase A chromatid-to-pole motility depends on a combined "flux-pacman mechanism" and is remarkably fast (0.1 µm s1) (14
,18
). Once chromatid-to-pole motion is essentially complete, anaphase B onset is triggered by the suppression of poleward flux within ipMTs, which allows persistently sliding ipMTs to exert forces that drive spindle pole separation at a similar fast rate (14
,21
). The spindle MTs are highly dynamic, displaying a turnover half-time of
5 s in FRAP experiments, independent of the position or phase of photobleaching ((21
) and D. Cheerambathur and J. M. Scholey, unpublished results) and fluxing poleward at 0.05 µm s1 before anaphase B onset (14
). This rapid turnover rate is plausibly due to dynamic instability of all subsets of spindle MTs, leading to the question "how can MTs that display rapid turnover and switch frequently between fast growth and shrinkage, drive steady and rapid motility?" Computational modeling using systems of force-balance and rate equations suggests that highly dynamic ipMTs can drive steady, linear pole-pole separation during anaphase B (21
), and below we use similar modeling approaches to determine the feasibility of driving rapid, steady chromatid-to-pole movements using highly dynamic kMT tracks.
|
Although some aspects of chromatid motility that are used in Drosophila embryos are likely to be widely employed among different cell types, other features may represent adaptations for rapid motility. For example, evidence is accumulating from a number of systems in support of the hypothesis that a kinesin-13 depolymerase located at the spindle poles plays a significant role in driving poleward flux (26
28
). In contrast, most studies on the role of kinesin-13 and dynein on kinetochores has focused on the role of these motors in error-correction mechanisms and in the spindle assembly checkpoint, rather than in chromatid motility per se (29
33
). Thus, it is possible that the KLP59C and dynein-based "pacman" mechanism used in Drosophila embryos is a functional adaptation that facilitates rapid motility concordant with the rapid rates of mitosis observed, a possibility that can be explored using modeling.
Two pioneering quantitative models have recently been proposed to describe chromosome motility (34
36
). In the first, a force-balance model of the kinetochore was successfully used to describe the forces that drive metaphase chromosome oscillations and directional instability, based on a "Hill-sleeve" structure in which the kinetochore contains "sleeves" that bind kMTs on their inner surface (34
,37
,38
). However, in this study, the identity and mechanism of action of the relevant kinetochore motors were not examined. A different theoretical approach was used to describe the positioning of metaphase kinetochores in the budding yeast spindle (35
,36
), but in that study the mechanism by which kinetochores attach to spindle MTs and remain attached under varying force regimes was not addressed.
Here, we develop a mathematical force-balance model of chromosome motility that describes the dynamics of a pair of sister kinetochores and their associated kMTs during metaphase and anaphase A in Drosophila syncytial blastoderm embryos. The model is based on a kinetochore-MT interface as drawn in Rogers et al. (18
), Maiato et al. (5
), Maddox et al. (13
), and Rieder and Salmon (25
), and incorporates the concerted action of force generators coupled to MT-dynamics. The model includes the dynamics of kMT and its modulation by enzymes and forces; the forces generated by antagonistic and complementary enzymes and polymers at the kinetochores and poles; a simplified mechanistic description of the centromeric cohesin bonds between sister chromatids; polar ejection forces; and a force-balance between the forces acting on kts and viscous drag forces (34
36
). By varying the model parameters, we provide a good description of metaphase-anaphase A kt behavior in Drosophila embryos and also in various other cell-types based on the action of mitotic motors and MT dynamics, without the need to invoke additional poorly characterized structures such as "Hill sleeves". The model demonstrates: 1), that multiple highly dynamic and transiently attached kMTs can drive steady, accurate chromosome movements; 2), that kts can maintain persistent attachment to a spindle pole despite the high dynamicity of the kMT plus ends and the presence of several force generators; 3), that the low amplitude and frequency of metaphase chromosome oscillations in Drosophila embryonic spindles may be due to high dynein activity at the kinetochores, 4), that the action of the kinesin-13 depolymerase KLP59C promotes metaphase oscillations; and finally 5), explores the generality of the proposed mode of action of the Drosophila pacman motor in other organisms.
| MODEL |
|---|
|
|
|---|
Definitions and assumptions
During metaphase/anaphase A, the spindle poles in the Drosophila mitotic spindle are maintained at
10 µm spacing (cycle 12) (14
). In all descriptions below, the positions of the kinetochores, and microtubule plus and minus ends, correspond to distances from the spindle equator, located at the origin (x = 0), and the left and right spindle poles are located at x = 5 and x = 5, respectively, mimicking the metaphase/anaphase A steady-state pole separation of
10 µm in the Drosophila embryo. All forces and velocities associated with the right and left kinetochores and kMTs are assumed to be positive in the poleward direction (toward the right pole for the kinetochore tethered to the right pole, and toward the left pole for the kinetochore tethered to the left pole) unless otherwise specified.
denote the current position of the right and left sister kinetochores' plates with respect to the spindle equator (Fig. 1 B).
and
denote the time-dependent velocities of the right and left sister kinetochores, respectively (Fig. 1 B).
denote the current position of the plus ends of kMTs with respect to the spindle equator, and
and
are the time-dependent poleward sliding rates of the right and left kMTs, mediated by motors sliding them against ipMTs, or by motors located near the spindle poles and "reeling in" the kMTs toward the poles, respectively (Fig. 1 B).
In our model, we make the following explicit assumptions: i), We assume that the motility events examined here are driven by an intrinsic balance of forces generated in the spindle, and we do not consider the possibility of morphogens or other external factors such as the dynamics of a hypothetical spindle matrix driving the motility events we investigate. ii), We assume that throughout the metaphase/anaphase A isometric state, pole-pole distance is maintained by a balance of antagonistic forces generated at antiparallel overlaps between ipMTs and astral MTs, and in this model, as in previous considerations of kinetochore positioning, we do not address how changes in spindle pole positions can/may affect kinetochore positions and vice versa (34
-36
). iii), We assume that all motor-generated forces are additive, i.e., the total motor generated force depends linearly on the total number of active force generators. We further assume that all motor enzymes considered have linear force-velocity relationships (see Appendix) similarly to conventional kinesin and as proposed recently for dynein (39
41
). iv), We assume that in the MT-motor-kinetochore interactions, the length of the MT tip interacting with the kinetochore structure is the force limiting factor.
Force-balance equations
In this analysis we consider separately the forces acting on the kinetochore and the kMT.
Force-balance on the kinetochore
The direction of movement and the velocity of a chromosome during metaphase/anaphase A are determined by a balance of forces acting on its kinetochore (Fig. 1 C). These forces include: 1), forces resulting from the antagonistic effect of plus and minus end-directed motors, cenpE and dynein, bound to the kinetochore and moving along their kMT tracks that flux poleward by being "reeled in" toward the poles or slid poleward and depolymerized,
and
for the right and left kinetochores; 2), forces generated by polymerizing plus ends of kMTs impinging on the kinetochore plate,
and
; 3), elastic tension forces due to flexible cohesin bonds between sister kinetochores during metaphase, pulling the kinetochores toward one another,
; and 4), polar ejection forces pushing the chromosome arms toward the spindle equator during metaphase, thereby exerting forces to push the kinetochores toward the spindle equator,
and
. The sum of these forces is, at any time, balanced by the viscous drag forces on the kinetchores,
, and
where µ is the effective drag coefficient associated with the Drosophila chromosome (42
). Thus, for the right and the left kinetochore, we have the following force-balance equations coupled to one another via the tension force:
![]() | (1) |
In the coupled force-balance equations (Eq. 1), the magnitude of
(similarly
) depends upon: i), the total number of kMTs bound to the kinetochore (for simplicity a single kMT is shown in Figs. 1, B and C, and equations here describe the situation shown); ii), the number of active motors at the kinetochore that are bound to the MT and exert forces, i.e., the average number of cenpE and dynein motors per unit length of MT embedded in the kinetochore structure (
and
for dynein and cenpE motors, respectively), and the length of the MT tip inserted into the kinetochore structure
, where r is the distance between the tip of the fibrous corona and the kinetochore plate in the three layer kinetochore structure (Fig. 1 B) (4
,5
,25
); and finally iii), the force generated by each plus and minus end-directed motor,
and
. That is,
![]() | (2) |
Assuming that motors obey linear force-velocity relationships (see Appendix), the forces
and
in Eq. 2 can be written as
and
, where
,
,
, and
,
, and
are the stall force, unloaded velocity, and the current time-dependent velocity of the dynein and cenpE motors, respectively. Furthermore, the velocities of the motors can be written in terms of the velocities of the kinetochore and that of the kMT along which they are moving, in the following kinematic equations:
![]() | (3) |
![]() | (4) |
The magnitude of
(similarly
) depends upon the position of the plus ends of kMTs impinging on the kinetochore plate. Specifically, the polymerization force is equal to zero when the kMT tip is not impinging on the kinetochore plate and increases linearly in proportion to the length of kMT tip embedded in, and impinging on the kinetochore plate, at rate
. Here,
is a parameter representing the elastic modulus of the kinetochore plate:
![]() | (5) |
Similarly to previous quantitative models proposed to explain the dynamics of metaphase chromosomes, we represent the tension force between the kinetochores by a linear spring (34
36
). The magnitude of the force Ftension thus depends only on the distance between the sister kinetochores, i.e., the relative position between the kinetochores:
, the rest length and the stiffness of the spring-like cohesin bonds, d0 and
, respectively:
![]() | (6) |
Finally, the polar ejection forces,
(or
), are directed toward the spindle equator and are positive in the right-half spindle and negative in the left-half spindle for the chromosome associated with the right pole, and respectively positive in the left-half spindle and negative in the right-half spindle for the left pole-associated chromosome. The polar ejection forces are assumed to be due to interactions between the chromosome arms and the spindle MTs' plus ends, and thus are proportional to the density of MTs emanating from each pole. Therefore, the magnitude of this force depends on the position of the kinetochore in the spindle and is represented by the square of the distance between the kinetochore and the spindle equator, and an adjustable parameter,
, depicting the steepness of this relationship similarly to previous models (34
36
). For example, in the right-half spindle, the polar ejection forces exerted on the right kinetochore are
![]() | (7) |
![]() | (8) |
Force-balance on kMT and kMT minus end dynamics
Similarly to the kinetochore, we also consider the forces on the kMTs that link the kinetochores to the spindle poles. As mentioned above, we assume that kMTs are being "reeled in" or slid toward the spindle poles at rates
and
by motors. We do not specify or distinguish whether these motors are located at the spindle poles and reeling the kMTs into the poles, or are located along the kMTs themselves and sliding them poleward against the ipMTs in the vicinity of an unknown spindle structure. We further assume that the minus ends of kMTs are being depolymerized at the rate they are being pushed into the poles during the metaphase/anaphase A steady state, i.e., the depolymerization/flux rate of the minus ends of kMTs equals their sliding rate,
and
, and hereafter this velocity will be referred to simply as the depolymerization velocity, and the associated force generator and force as the depolymerization motor and depolymerization force, respectively. The forces due to the depolymerization motors, reeling the kMTs into the poles, are antagonized by motors at the kinetochores pulling the kMTs toward the kinetochore, and assisted by polymerization ratchet forces if the kMT tip impinges on the kinetochore plate, pushing the kMT away from the kinetochore. The sum of these forces is, at any time, balanced by viscous drag forces on the kMTs:
![]() | (9) |
The viscous drag forces on a 510 µm long MT, moving at a speed
0.1 µm s1, are in the order of femtoNewtons (43
) (note that the highest known poleward flux rate or equivalently the depolymerization rate of kMTs minus ends in Drosophila are
0.05 µm s1 (14
,15
)), and are negligible in comparison with picoNewton-range motor forces. Also, assuming a linear-force velocity relationship for the depolymerization motors, Eq. 9 can be recast as:
![]() | (10) |
Here,
is the number of active depolymerization motors per kMT,
is the stall force, and
is the maximal velocity of the depolymerization motors. Note that the depolymerization or equivalently the flux rate of the kMTs' minus ends,
and
, are coupled to the kinetochore dynamics through Eq. 10.
kMT plus end dynamics
We assume that the plus ends of kMTs undergo dynamic instability, a phenomenon characterized by stochastic switching of microtubules between the growing and shrinking states referred to as catastrophe and rescue events, respectively, whereas they flux poleward as they are reeled into the poles and depolymerize at their minus ends (7
,8
). Both the growth and shrinkage events of the plus ends and that of the minus end-associated poleward flux modify the position of the plus ends of kMTs with respect to the kinetochores and within the spindle. We assume that the four parameters of dynamic instability, namely the growth and shrinkage rates and the catastrophe and rescue frequencies, that determine the dynamics of kMTs' plus ends are affected by forces acting on the kinetochore, the kinetochore structure, and motor enzymes bound to the kinetochore as described below, and all the parameters introduced in what follows are essential in the model to account for the chromosome behavior in the Drosophila embryo:
due to steric hindrance for MT tips that interact with the kinetochore; i.e., the growth and shrinkage velocities of MT plus ends that are attached to the kinetochore are vg/
and vs/
.
KLP59C > 1, down to fres/
KLP59C, thereby prolonging the duration of shrinkage events (44
, and its rescue frequency, fres, returns to the low tension state (fres/
KLP59C) irrespective of the current tension on the kinetochore, while it continues to impinge on the kinetochore plate (45
A similar tension-dependent rescue mechanism for MTs was used to model the metaphase kinetochore positioning of the budding yeast, where each kinetochore is linked to its pole by a single MT (35
). However, in that model, the single kMT is assumed to maintain attachment with the kinetochore under all tension forces and the authors do not address the dynamics of this attachment. Indeed, the dependence of the MT dynamic transition frequencies on tension forces exerted on the kinetochore provides a mechanism for the kinetochore to regulate the number of kMTs (33
,46
). When kMT number is high, tension force per kMT is low (even when the total tension on the kinetochore is high), thus kMTs that undergo catastrophe do not rescue frequently/quickly enough, resulting in loss of kMTs. This loss continues until tension force per kMT is elevated to or above a value that causes a significant increase in the rescue frequency, which not only prevents further loss of existing kMTs from the kinetochore, but enables it to gain new MTs until the tension force per kMT decreases sufficiently to cause a significant drop in the rescue frequency, and the cycle continues. Thus, here, we propose a tension-dependent regulation mechanism for kMT plus end dynamics (and therefore the number of kMTs) along the lines of the slip-clutch model for kinetochores proposed by Salmon and co-workers (13
,47
) based on a tension-dependent regulation of MT rescue frequency at the kinetochore-MT interface of a kinetochore fiber, the subset of spindle MTs that link a kinetochore to its pole, composed of multiple MTs.
Realistic kinetochore-MT interface in the Drosophila embryo: multiple kMTs per kinetochore
Equations 8 and 10 describe the dynamics of a pair of sister kinetochores with only a single kMT attached to each kinetochore, similar to the kinetochores in budding yeast mitosis or at best, can only describe the dynamics of kinetochores with, say, N identical kMTs with synchronized dynamics. In the Drosophila embryo spindles, even though the exact number of kMTs per kinetochores has not yet been determined, it is thought to be between 5 and 15, similar to but fewer than that of the PtK cell kinetochores (2
,6
) but unlike the Saccharomyces cerevisiae, which has a single kMT per kinetochore (48
), and no mechanism that would lead to the synchronization of kMTs dynamics is currently known. We describe the dynamics of kinetochores bound to multiple MTs by assuming that forces are additive and by considering forces generated by each MT attached to the kinetochore as described above, and considering the dynamics of each MT separately (see Appendix). This yields a large system of coupled algebraic equations that is solved numerically (See Appendix).
| RESULTS |
|---|
|
|
|---|
5 s); ii), fast KLP59C and dynein-driven pacman mechanism (
0.06 µm s1); iii), fast KLP10A-driven poleward flux (
0.04 µm s1); and iv), an assumed 510 kMTs per kinetochore. Solutions of the model are displayed as computer animations (Supplemental Material movies 14), and graphs and histograms (Figs. 24
|
|
|
|
5 s by FRAP (21
The solutions to the model equations are displayed as plots of positions of a pair of sister kinetochores over time in Fig. 2, A and B. Even though the duration of metaphase is
6080 s in the Drosophila embryo, in the figures, the duration of metaphase was artificially extended, typically to 2000 s, to better illustrate the characteristics of the sister kinetochores' behavior under various metaphase conditions. Plots of the metaphase/anaphase A kinetochore positions over time where kinetochores can bind to a maximum of 15 MTs (Fig. 2, A and B, upper panels) show that, in the spindle where MTs are highly dynamic and transiently attach to the kinetochores, the combined action of motor enzymes, polymer ratchets, and MT dynamics leads to metaphase oscillations of chromatids around the spindle equator (Fig. 2 A, upper panel, initial 2000 s and the simulation snapshot shown in Fig. 2 C). Alternatively, in spindles where MTs are less dynamic, a stable metaphase positioning of chromatids around the spindle equator is produced (Fig. 2 B, upper panel, initial 2000 s and the simulation snapshot shown in Fig. 2 D). In the spindle where MTs are highly dynamic (Fig. 2 A), the average distance traveled during each poleward or antipoleward excursion is
12 µm and of average duration
50100 s, similar to rates observed in newt lung cells (10
).
It is also seen that the tension-dependent regulation of kMT dynamics is sufficient to account for the coupling between sister chromosomes: while a kinetochore moves poleward, its sister moves antipoleward. Also, in Fig. 2, A and B (lower left panels), the distance between the sister kinetochores is shown: in both spindles, the kinetochores are mostly under tension, since the distance between sisters is greater than the rest length of the cohesin bonds, r, in good agreement with experimental observations (50
). In the right lower panels in Fig. 2, A and B, the histograms of the number MTs attached to the kinetochores are shown, and in the spindle where MTs are very dynamic, the kinetochores only maintain attachment with half of the MTs,
8 out of the 15 MTs on average (Fig. 2 A and the simulation snapshot shown in Fig. 2 C), indicating that kinetochore-MT attachments are transient. In contrast, in spindles where MTs are less dynamic, the kinetochores maintain attachment with more MTs,
14 out of the 15 MTs, on average (Fig. 2 B and the simulation snapshot shown in Fig. 2 D), indicating that kinetochore-MT attachments are longer lasting (note that there can be a maximum of 15 MTs attached to kinetochores in this instance).
The movement of a kinetochore toward its pole requires that most (if not all) of the MTs that are bound to the kinetochore throughout this movement remain in a depolymerization state, whereas those of its sisters may depolymerize and detach or polymerize and attach. These results indicate that, when MTs are highly dynamic and turn over rapidly, the MT-kinetochore attachments are transient (duration of kt-MT attachment is 43 ± 45 s in Fig. 2 A) and depolymerization events are frequent. This allows the kinetochore module, consisting of the motors and forces at the kinetochore that regulate kMT dynamics (specifically, prolong the catastrophe events by suppressing the rescue frequency of kMT), to synchronize the shrinkage/depolymerization events of multiple kMTs, leading to the excursions of the kinetochores toward and away from their poles. In contrast, when MTs turn over slowly, the MTs' attachment to the kinetochores persist for longer times (duration of kt-MT attachment is 450 ± 412 s in Fig. 2 B) and shrinkage events are rare. In this case, the kinetochore module cannot synchronize the depolymerization of multiple kMTs even when the MT rescue is suppressed by the KLP59C motors, and catastrophe events are prolonged, which leads to stable positioning of the kinetochores at the spindle equator. In spindles in which the MTs are highly dynamic and the kinetochores undergo excursions between the spindle poles, the leading kt's MTs are mostly in a depolymerization state as it moves poleward, and the kt switches direction when the forces acting on the kinetochore increase to a level that inhibits the suppression of rescue (due to the action of KLP59C motors) and when a sufficient number of MTs have switched to a polymerization phase.
Finally, in Fig. 2, A and B (upper panels), it is also seen that the dissolution of the cohesin bonds and inactivation of polar ejection forces alone (at time = 2000 s) is sufficient to mediate the metaphase to anaphase A switch in kinetochore behavior. The rates of anaphase A kinetochore to pole movement in the spindle with highly dynamic MTs (Fig. 2 A, last 50 s) is vA
0.065 µm s1, and it is faster than the flux rate vflux
0.05 ± 0.01 µm s1. In the spindle with less dynamic MTs (Fig. 2 B, last 50 s), the anaphase A rate is only slightly above the mean flux rate vA
0.055 µm s1, thus the pacman rate is attenuated regardless of the pacman machinery being present and active. This result also indicates that the extent of the regulation of kMT dynamics by the kinetochore module is limited by the turnover rate of MTs, i.e., when MTs turnover is fast, the kinetochore module contributes to the chromosome-to-pole motility rate through a pacman mechanism, and when MT turnover is slow, the effect of motors and forces becomes ineffective in synchronizing the shrinkage events of kMTs, leading to an attenuation of the pacman component of anaphase A.
Role of the number of MT binding sites on the kinetochore on metaphase positioning and anaphase A rates
The maximal number of kMTs that make up a kinetochore fiber, or equivalently the number of MT attachment sites on the kinetochore, i.e., the size of the kinetochore, is species-specific: at the lower end of the scale, S. cerevisiae kinetochores attach to a single MT (48
), whereas mammalian cell kinetochores attach to 20 or more MTs (6
) compared to the assumed number in Drosophila of between 5 and 15 (2
). Differences in kinetochore size and kinetochore fiber composition might, in addition to MT dynamics, affect the metaphase oscillations and the efficiency of the pacman mechanism investigated here, which is based on the properties of the KLP59C motor that works by suppressing MT rescue frequency as in Drosophila embryo (44
). We thus modeled kinetochores that can accommodate up to 7, 15, or 30 MTs, mimicking various kinetochore sizes, to examine whether and how the metaphase oscillations or the anaphase A rates depend on the average number of MTs in the k-fiber. In Fig. 3, AC, the positions of metaphase chromatids with a maximum of 7, 15, and 30 MT attachment sites are shown for spindles with highly dynamic MTs (note that only in spindles with highly dynamic MTs, metaphase chromatid oscillations occur (Fig. 2 A)). In all three different sized kinetochores, the chromosomes exhibit long poleward and antipoleward excursions with rapid reversals in direction, the signature of directional instability (10
). However, there are some subtle differences, for example, the excursions become smoother and regular as the kinetochore size (maximal number of MT attachment sites) increases (compare Fig. 3, A and C), and a predicted disadvantage of having small kinetochores with fewer MT binding sites is the occasional detachment of kinetochores from all its MTs (data not shown). Also, there is a slight decrease in the anaphase A rates with an increase in the kinetochore size (vA
0.0750.065 µm s1).
The parameters for MT dynamics used in Fig. 2 A or Fig. 3, AC, mimic the rapid MT turnover rates observed in the Drosophila embryo (21
); however, such excursions of chromosomes are not observed in the embryos (13
,15
). Also, the anaphase A rates found under these conditions (vA
0.0650.075 µm s1, in Fig. 2 A and Fig. 3, AC) are below the experimentally observed rates of 0.1 µm s1; however the anaphase A rates of smaller kinetochores with up to 7 kMTs (Fig. 3 A) are in better agreement with the observed rates (0.075 µm s1), therefore the Drosophila kinetochore may have fewer than 15 MT binding sites, possibly somewhere between 5 and 10. We reasoned that an additional cause for the discrepancy between the observations and the results shown in Fig. 2 A and Fig. 3, AC, i.e., the lack of metaphase oscillations in the embryo and the faster anaphase A rates, could be a small number of working dynein motors. The effect of dynein in Drosophila embryos, particularly its localization at the kinetochores during metaphase and anaphase A and its role in chromosome segregation, has been a controversial one (20
). However, as a minus end-directed MT motor, dynein is thought to "feed" kMTs' plus ends into the kinetochore and thereby facilitate the pacman mechanism (5
,18
,20
). Therefore, we wanted to examine if increased dynein activity at the kinetochores affects metaphase behavior and anaphase A rates.
Role of active dynein at kinetochores on metaphase positioning and anaphase A rates
First, in Fig. 4 A (left and right panels), the model was solved for the conditions and parameter values as in Fig. 2 A, except for a high number of working dynein motors and a corresponding increase in the stiffness of the kinetochore plate to prevent unrealistic elastic deformations of the kinetochore due to dynein pushing the kMTs toward the kinetochore plate (corresponding to nd = 30 and
= 50 in Eqs. 4, 5, and 8, in contrast with nd = 15 and
= 25, which were the values used in Fig. 2 A). We find that this increase in dynein activity at the kinetochores i), dampens the metaphase oscillations (compare the behavior of kinetochores in Fig. 4 A (left panel), with those in Fig. 2 A), and ii), accelerates the rate of kinetochore to pole motility to vA
0.08 µm s1 by
25% (compare the last 50 s of Fig. 4 A, left panel, or Fig. 4 A, right panel, and Fig. 2 A). The cessation of metaphase oscillations in response to increased dynein motors working at the kinetochores is due to an increased poleward force acting at the kinetochore to oppose a higher tension force between the sister kinetochores. This not only suppresses the activity of the depolymerase (i.e., inhibits the suppression of rescue) but also promotes a higher rescue rate during metaphase, both of which slow down the turnover rate of kMTs and stabilize MTs. Under these conditions, MT-kinetochore attachments therefore become less transient during metaphase, and at anaphase A onset, the kinetochore begins its excursion toward the spindle pole with the advantage of holding onto almost all its MTs. Now the KLP59C depolymerase motors effectively suppress kMT rescue events of kMTs that are inserted into the kinetochore plate by dynein motors and catastrophe at a higher rate, leading to an increase in the pacman rate.
Metaphase positioning and anaphase A rates in Drosophila embryos: wild-type and dynein inhibition
Indeed, an excellent agreement with both metaphase and anaphase A chromatid motility rates in Drosophila embryos was obtained (vA
0.09 µm s1) for spindles with highly dynamic MTs, high dynein activity, and 7 MT binding sites per kinetochore (Fig. 4 B, left and right panels, and Supplemental Material movie 3). Since the flux rate is vflux
0.035 µm s1, this augmented anaphase A rate requires that pacman accounts for
60% of the anaphase A rates (18
). In movie 3, it can be seen that the kinetochores overtake the tubulin speckles, typical of the combined flux-pacman anaphase A mechanisms in Drosophila embryo. Furthermore, reducing dynein activity by 50% alone under these conditions (nd = 15) to simulate dynein inhibition resulted in 3040% attenuation of anaphase chromatid to pole rates, and occasional chromosome detachment, which is in very good agreement with earlier experimental observations in some dynein inhibited embryos (in which a gradient of phenotypes including detached kinetochores and reduced anaphase A rates were observed) (20
) (Fig. 4 C, left and right panels). The poleward flux rates of the kMTs in these spindles with lowered dynein activity levels (Fig. 4 C) were not significantly different than those with higher dynein activity (vflux
0.04 µm s1). This indicates that this change in dynein activity is not sufficient to alter the flux rate nor interfere with the flux mechanism, i.e., the flux motors continue to operate near unloaded regime regardless of the 50% change in dynein activity at kinetochores that antagonizes the flux motors, but elevated dynein activity at kinetochores increases anaphase A rates by engaging the pacman mechanism (18
,20
). This result, together with the results in Fig. 2 B, suggest that the efficiency of the specific pacman mechanism investigated here depends on the level of dynein activity at the kinetochores and is limited by the dynamics of MTs: increasing the dynein activity enhances the extent of engagement of the pacman mechanism, and the pacman mechanism investigated here is ineffective if the MTs turn over very slowly.
Role of KLP59C depolymerase on anaphase A rates in Drosophila
To further investigate the contribution of the KLP59C motors to the rapid chromatid to pole rates (Fig. 4 B, right panel), we tested our model under conditions that mimic the inhibition of KLP59C motors (corresponds to setting
KLP59C =1). The KLP59C motors are suggested to function by suppressing the rescue frequency of MT plus ends in Drosophila, which is the only effect these motors have on kMT dynamics in our model (18
,44
). The plots of sister kinetochores' positions shown in Fig. 4 D (left and right panels) or movie 4 (Supplemental Material) thus pertain to a KLP59Cinhibited Drosophila embryonic spindle with highly dynamic MTs, kinetochores with 7 MT binding sites, and high dynein activity at kinetochores (2
,20
,21
). In contrast with the motility of the sister chromatids in a wild-type Drosophila embryo (Fig. 4 B), where the anaphase A rate is vA
0.09 µm s1, in the KLP59C-inhibited spindle (Fig. 4 D, last 50 s in left panel or Fig. 4 D, right panel) the anaphase A rate is attenuated by
40%, vA
0.055 µm s1, in reasonable agreement with experimental results (18
). It can also be seen in movie 4 that, in this spindle, the kinetochores rarely overtake the speckles.
Role of KLP59C depolymerase on metaphase positioning and anaphase A rates in other species
We also wanted to study the efficiency of the KLP59C-based pacman mechanism in an organism with larger kinetochores and a correspondingly higher number of MT binding sites, such as in PtK cells (6
). Can this mechanism work as fast in spindles with larger kinetochores if dynein activity is high and MTs are highly dynamic as in Drosophila embryos? We find that, in spindles where kinetochores can accommodate up to 30 MTs, where MTs are highly dynamic, and where dynein activity is high, the anaphase A rates are only
1020% higher than the mean flux rate (vflux
0.05 µm s1) despite the presence of active pacman motors. This indicates that the Drosophila pacman mechanism loses efficiency (maximal pacman rate
0.01 µm s1 for the value of
KLP59C, the factor for the suppression of rescue frequency used for the Drosophila spindle) in spindles with large-sized kinetochores (or equivalently kinetochore fibers composed of more than 15 kMTs) even if dynein activity and MT dynamics are sufficiently high to effectively engage the KLP59C pacman motors (results not shown). Further, we find that in spindles with dynamic microtubules such as in Fig. 3, AC, where dynein activity is low, when we inhibit the KLP59C activity, the oscillations cease (results not shown). This suggests that a KLP59C-like depolymerase, which suppresses rescue frequency, promotes metaphase oscillations, possibly by helping kMT plus ends synchronize their depolymerization dynamics during metaphase through prolonging the shrinkage events that are otherwise short lived when kinetochores are under tension.
| DISCUSSION |
|---|
|
|
|---|
Chromosome motility in Drosophila embryos
Chromosome motility in Drosophila embryos is well characterized (Fig. 1 A) and proceeds in spindles that contain highly dynamic MTs (turnover half-life
5 s) with each kt having
515 maximum MT attachment sites (2
,14
,15
,18
,21
). The dynamics of chromosome motility in this system can be reproduced very well by our model, so long as dynein and KLP59C remain active at the kinetochore (Fig. 4 B, left and right panels) in good agreement with experimental data (18
,20
). Our model shows that, in this system, where MTs are highly dynamic and flux rates are high, to ensure the observed fast and steady rates of chromatid-to-pole motility, i), high dynein activity at kinetochores must be maintained throughout metaphase/anaphase A to prevent detachment of the kinetochores from poles, and ii), KLP59C motors are required to prevent high rescue during anaphase A. Thus, the combined action of these two motors dampens the metaphase chromosome oscillations, a model prediction supported by previous experimental work in Drosophila embryos (13
,15
,20
), and produces a fast pacman mechanism.
The model also predicts that kt dynein activity is necessary for KLP59C to work effectively as a pacman motor (Fig. 4 C, left and right panels) (20
). Our analysis is consistent with the idea that the use of KLP59C and a high number of dynein motors on kts in the Drosophila embryo spindles represent the adaptation of a general mechanism, governing the behavior of metaphase and anaphase A chromosomes in many systems, for fast motility, which is a characteristic feature of the fly embryos. A significant result of the model is that highly dynamic kMTs are capable of driving chromatid-to-pole motility at a fast, steady rate, as is observed (14
,15
,18
,21
). Thus the model complements a recent model for anaphase B in this system, which also describes steady linear pole-pole separation by motors that are working on tracks that are constantly growing and shrinking (21
).
Forces on kinetochores, kMTs, and motors
The model results suggest that both the plus and minus end-directed motors at the kinetochore (dynein and cenpE) work near their stall regime throughout metaphase and anaphase A (data not shown). During anaphase A, the action of the minus end-directed motor dynein, in particular, is antagonized mainly by the MT ends impinging on the kinetochore plate, in addition to the plus end-directed motors at the kinetochore and the flux motors at the spindle pole. This implies that the anaphase A kinetochore must be compressed. The available EM data on kinetochore structure in some systems supports this idea: the anaphase A kinetochore is very deformed and ragged compared with an early metaphase kinetochore (6
). Also, at least a subset of kMT tips must be compressed at the kinetochore interface by the action of the minus end-directed MT motors, e.g., dynein in the case of Drosophila, pushing them into the kinetochore plate.
Mechanism of coupling kMT dynamics
To produce coordinated behavior of the sister kinetochores, the dynamics of the sister kMTs as well as the dynamics of the kMTs of each kinetochore must be coordinated and coupled. For example, during metaphase, when a kinetochore moves poleward by net depolymerization of its kMTs, its sister's kMTs must, on average, polymerize. Similarly, during anaphase A, the dynamics of the kMTs of a kinetochore must be coordinated to ensure the kinetochore's attachment to its pole throughout anaphase A. The presence of tension forces across the kt appears to be sufficient to coordinate the dynamics of the kMTs of the sister kinetochores. However, coordination of the dynamics of a kinetochore's MTs is more complex: in this case, i), the kinetochore plate provides a barrier beyond which individual kMTs cannot grow, therefore couples the dynamics of growing plus ends of kMTs to one another; ii), when the kinetochore is not under tension, the KLP59C pacman motors couple the shrinkage/depolymerization dynamics; and iii), when the kinetochore is under tension, kMTs remain, on average, in either a growth or neutral state (impinging on the kinetochore plate, without being able to undergo net growth).
Predictio