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* Department of Biological Sciences, University of Warwick, Coventry CV4 7AL, United Kingdom;
Waters MS Technologies Centre, Micromass UK Ltd., Manchester M22 5PP, United Kingdom; and
Structural Genomics Consortium, University of Oxford, Botnar Research Centre, Oxford OX3 7LD, United Kingdom
Correspondence: Address reprint requests to Jonathan P. Williams, Dept. of Biological Sciences, University of Warwick, Gibbet Hill Road, Coventry CV4 7AL, UK. Tel.: 44-2476-522157; Fax: 44-2476-523701; E-mail: j.p.williams{at}warwick.ac.uk.
| ABSTRACT |
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-helix that is absent in the SLTx B monomer. In silico energy calculations support interactions between this helix and the adjacent monomer. These data provide insight into the apparent stabilization of CTx B relative to SLTx B. | INTRODUCTION |
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11.6 kDa/subunit) form a doughnut-shaped ring and that the A subunit (
27.5 kDa) is composed of two distinct domains, A1 and A2. The A1-domain is responsible for the enzymatic activity of the toxin, whereas the A2-domain assists in the tethering of the A1-domian to the B subunit pentamer by inserting noncovalently into and through the central pore of the B5 complex (Fig. 1). The CTx A1 subunit is an ADP-ribosyltransferase and NAD-glycohydrolase that can modify G proteins by ADP ribosylation (9
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In addition to the well-characterized cytotonic properties of CTx, interaction between the CTx holotoxin or the isolated B5 pentamer and specific target cells can also promote signaling pathways not linked to cAMP induction or indeed to other second messenger molecules. This can lead to different immunomodulatory functions, such as mucosal adjuvant effects, depending on the target cell type (22
). A key element in the diverse signaling activities of this toxin is the initial oligomerization of GM1 receptors upon binding the B-chain pentamer. This is believed to promote the recruitment of both signaling and accessory molecules into cholesterol-enriched membrane microdomains (lipid rafts) to establish and enhance signaling cascades (22
,33
). As such, analysis of the noncovalent interactions that promote and maintain the quaternary structure of this toxin is of fundamental importance since such interactions have significant biochemical and medical implications.
There have been relatively few reports of the analysis of CTx by mass spectrometry (MS) (34
,35
). An in-depth study by liquid chromatography MS (LC-MS) and LC tandem MS (LC-MS/MS) provided sequence information derived from tryptic digestion and showed that the toxin was well suited to mass spectrometric detection (35
). During this previous investigation, the AB5 holotoxin was not detected. Here, we demonstrate that the complete noncovalent assembled AB5 holotoxin remains intact during the electrospray ionization (ESI) process and can be observed in the mass spectrum.
ESI-MS has been shown to be an extremely useful tool in the study of the AB5 noncovalent assemblies of the Shiga-like toxin (SLTx) and multivalent complexes of SLTx with globotriaoside (36
). We have previously shown that SLTx from Escherichia coli can be detected over a pH range of 37 (37
), in contrast to the previous study where the AB5 holotoxin was not detected at neutral pH (36
). Investigation of the dissociation of the homopentamer B5, B4, and B3 assemblies by collision-induced dissociation (CID) in an instrument capable of performing MS/MS experiments was shown to provide dissociation pathways of the assemblies. Information relating to the structure of the assemblies was inferred from the product ions formed from the MS/MS experiments. The results obtained for the dissociation of the homopentamer B5 during the previous study (37
) were consistent with those obtained by thermal decomposition by blackbody infrared radiative dissociation within the cell of a Fourier transform ion cyclotron resonance mass spectrometer (38
).
Here, ESI-MS and ESI-MS/MS have been successfully used to examine the noncovalent interactions that exist between the subunits of the complete CTx holotoxin and the pentameric B chains. The first objective of this investigation was to examine the ions produced from the complete hexameric noncovalent holotoxin complex (CTx AB5). Our results clearly show that the intact complex was observed in the gas phase in a time-of-flight (TOF) mass spectrometer. Furthermore, we report the dissociation of the noncovalent homopentameric binding subunit of the CTx by means of CID in a collision cell of a triple quadrupole mass spectrometer. This has allowed us to probe the noncovalent assembly of CTx and CTx-B5s through their gas phase dissociation pathways.
| MATERIALS AND METHODS |
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Mass spectrometry
Experiments were performed in a single TOF mass spectrometer (LCT, Waters MS Technologies, Manchester, UK) and a triple quadrupole mass spectrometer (Quattro Ultima, Manchester, UK). In each instrument, noncovalent assemblies were observed by increasing the backing pressure between the source and high vacuum region. Both instruments were equipped with the standard Z-spray ESI source and operated at a source and desolvation temperature of 110°C. Sample solutions were introduced into the source region of the instruments by conventional electrospray, operated in positive mode of ionization with a capillary voltage of 3 kV, and optimized for the transmission of noncovalent assemblies. In the triple quadrupole instrument, tandem mass spectrometry (MS/MS or MS2) was carried out using argon collision gas at a pressure of 2.5 x 103 mbar within the radio-frequency (RF)-only hexapole collision cell.
Data acquisition and processing were carried out using MassLynx (V3.5). Transform or, alternatively, maximum entropy-based software was used to find the masses of the subunits and hence the charges on each multiply charged ion. All spectra shown were subjected to minimal smoothing. The upper m/z range of the triple quadrupole instrument is 4000 so that, since the monomer has a mass of nearly 11,600, ions of the type
could be observed only if y is 3x or greater.
The complex formed by the homopentameric binding subunit of the CTx (CTx B5) and the hexameric holotoxin (CTx AB5) was studied by direct infusion at a concentration of 4.5 pmol/µL and 8 pmol/µL in 10 mM aqueous ammonium acetate at a pH of 4.07.0, adjusted by addition of dilute ammonia or formic acid solution, respectively. A Harvard Apparatus (South Natick, MA) Model 22 syringe pump was used to provide a flow rate of 4 µL/min.
Molecular modeling
The structures of SLTx (PDB code 1BOV) and CTx B (PDB code 1FGB) were taken from the Protein Data Bank (PDB) at Brookhaven (39
) and imported into the Molsoft ICM program (40
). The coordinates of the structures were then converted into internal coordinate space to allow regularization of the structures to be performed. Interchain energy calculations were made using the standard ICM force field (40
) between two adjacent monomers (chains A and B in 1BOV and chains D and E in 1FGB). Interactions were specifically analyzed and images made using ICM.
| RESULTS AND DISCUSSION |
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4.0; Fig. 4 C). The abundances of the monomer and pentamer ions observed did not remain constant over the pH range. At pH 5.0 the monomer B7+ ion had a relative abundance of
93% of the base peak corresponding to the pentamer
ion. At pH 4.0, the monomer B7+ ion was observed in the mass spectrum as the base peak and the pentamer
ion had a relative abundance of
64% to the monomer B7+ ion. The observed charged states for the AB5 holotoxin extend from 21+ to 15+. It is of interest to note that both the AB5 and B5 ions were observed throughout the pH range examined, suggesting that the hexameric AB5 CTx assembly and the pentameric B5 CTx B assembly were both stable at acidic pH. This is in marked contrast to findings with the structurally related AB5 SLTx, where the cell-binding B5 pentamer was less stable at acidic pH than the complete AB5 holotoxin (37
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We have demonstrated that the complete noncovalent assembly of the CTx holotoxin can be detected by ESI-TOFMS over a range of physiological pHs. To our knowledge, this is the first time the CTx holotoxin assembly has been observed intact in the gas phase by MS. The increased sensitivity afforded by TOF mass analyzers for observing such AB5 assemblies intact in the gas phase supports and extends our previous work (37
). The high degree of sensitivity also allowed for the accurate detection of differentially trimmed species of the A-chain component of the holotoxin preparation. Over 2 min acquisition time at a flow rate of 4 µL/min, 8 µL of 8 pmol/µL of AB5 solution was consumed to generate the mass spectra shown.
The TOF instrument is not capable of MS/MS experiments and further investigative studies were performed in a triple quadrupole instrument. The CTx AB5 ions observed could not be subjected to MS/MS experiments because of the upper mass range of 4000 of the triple quadrupole instrument. Therefore, further MS/MS experiments were carried out solely on the CTx B5 pentamer.
Triple quadrupole MS for the homopentamer B5
The CTx pentamer B5 consists of five identical subunits that arrange into a pentameric ring structure (Fig. 1 B). Each subunit has a molecular mass of 11.6 kDa and is composed of 103 amino acids. Initially, the mass spectrum was obtained for the noncovalent complex of CTx B5 buffered with ammonium acetate at pH
6.6 (Fig. 5). Ions corresponding to the CTx B5 homopentamer were observed at a range of pH from
4.07.0 (data not shown). The mass spectrum was obtained with a declustering voltage of 60 V. The base peak in the mass spectrum corresponds to
The dominant signal corresponds to the intact homopentamer (B5), with observed charge states extending from 18+ to 15+. The pattern of abundance of these ions is identical to the multiply charged species observed with the SLTx B5 ions, which extended from 15+ to 12+ (37
). This presumably reflects the overall similarity in tertiary and quaternary structure between the two toxins. The mass spectrum also shows monomer ions (B) with observed charge states from 8+ to 5+. The mass spectrum demonstrates that the homopentamer B5, the dominant quaternary form of the B subunit protein in solution (44
46
), remains intact during the ESI process. Furthermore, the B5 complex remained intact over a range a pH. Over 3 min acquisition time, at a flow rate of 4 µL/min, 12 µL of 4.5 pmol/µL of B5 solution was consumed to generate the mass spectra shown.
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5.0), similar to that found within the endosome compartment of intoxicated target cells, causes a conformational change within the CTx B5s (47
Triple quadrupole MS/MS of the homopentamer B5
MS/MS was then used to investigate the dissociation pathway of the homopentamer
ion (Fig. 6). The two dominant ions in the mass spectrum of the homopentamer correspond to
and
(Fig. 5). The
ion was selected as a precursor ion to undergo CID in the collision cell of the instrument, the collision energy being varied (1545 eV (ELAB = 255765 eV)) to obtain intense fragment ions (product ions). An increase in the abundance of product ions was observed as the collision energy was increased (Fig. 6 B). The multiply protonated pentamer species
selected for CID dissociates almost entirely via the loss of one subunit (Fig. 6 B) to form primarily abundant monomer ions having a range of charges. A very low abundant dimer
ion is also observed. The
dissociation formed monomer, dimer, trimer, and tetramer ions, but no peaks which could be unequivocally assigned to trimer ions were observed. These ions could still be formed, however, as the ions
and
cannot be distinguished from the ions B+, B2+, and B3+,
and
and
and
respectively, to which some of the peaks have been assigned. However, not all of the ions that are predicted to form were detected (Fig. 6 C). This was either due to them being present in very low abundance or due to the m/z ratio of the ion being beyond the upper m/z range of the instrument, 4000, as discussed above. This is important since the pentamer ion selected for dissociation does not only form monomer ions with a range of charges, it must form tetramer ions with a range of charges also. The tetramer ions formed though, for example
will unfortunately not be detected due to the limited m/z range of the instrument.
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required a collision energy of 40 eV, (ELAB 680 eV)
2.4-fold higher than that seen for the SLTx precursor ions
(Fig. 7) and
(37
20 eV (ELAB 280 eV).
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(CTx) and
(SLTx), to 50% of their initial abundances at similar collision gas pressures. An exact comparison cannot be made since the ions carry different numbers of charges and the distribution of products is unknown in each case. For the CTx complex, a 50% reduction in the abundance of the
ion was observed when a potential difference of 40 V was applied between the source and the RF-only collision cell, corresponding to a laboratory collision energy, ELAB, of 17 x 40 = 680 eV. For the SLTx complex, a similar reduction in the abundance of the
ion was observed with a potential difference of 20 V, corresponding to a laboratory collision energy, ELAB, of 14 x 20 = 280 eV. The approximate masses of the two complexes are 58 kDa and 38 kDa, respectively, and the collision gas was argon, mass 40 Da. The amount of energy available to effect dissociation, the center-of-mass collision energy ECOM, is given by ECOM = ELAB x (mAr/(mAr + mion)) x 96.5 kJ mol1, where ELAB is the ion kinetic energy in the laboratory frame of reference, mAr is the mass of argon the collision cell gas, and mion is the mass of the precursor ion. This leads to values of
45 kJ mol1 and 28 kJ mol1 for the CTx and SLTx complexes, respectively, implying that
1.5 times as much energy is required to effect the dissociation of the CTx pentamer compared to the SLTx B complex.
This difference in pentamer stability is also seen in aqueous solution (44
,46
,49
). Despite these differences, a high degree of structural stability exists in both the CTx and SLTx B5 pentamers at physiological pH (37
). This has been attributed to the large number of intersubunit interactions that occur between monomers (6
,50
). The amount of surface area buried during pentamer assembly differs between the two toxins, with CTx B having a greater buried surface area (2700 A2) than SLTx B (>1269 A2 < 2700 A2) (6
,51
). The degree of buried surface area correlates well with the measured stabilities of the two pentamers (44
), implying that additional interactions must be present within the CTx B monomer-monomer interface to account for its increased stability. We therefore compared the monomer interface region in the two different pentameric proteins. This revealed that the CTx B monomer interface has an additional
-helix which lies in front of the continuous ß-sheet that forms the majority of the CTx B monomer interactions (Fig. 8 A) and this region of secondary structure contains residues that interact with residues that lie in the adjacent monomer. The SLTx B monomer interface region, however, possesses only the continuous ß-sheet structure and not the
-helix (Fig. 8 B). In silico energy calculations were performed using the crystal structures of the CTx B (PDB code 1FGB) and SLTx B (PBD code 1BOV) pentamers to assess the theoretical interactions that exist between the additional helix present in the CTx B structure that can interact with the adjacent monomer (Table 1). The comparison of the pentameric structures provides an insight into the apparent stabilization of CTx B relative to SLTx B. The additional N-terminal helix shown in the CTx B structure is involved in a number of extra interactions between monomers such that the intermonomer interaction energy is
2.4 times greater than between the monomers of SLTx B. This value is in agreement with that determined experimentally for the increase in energy required to dissociate the two complexes. This revealed that the additional interactions in the CTx B pentamer would most likely result in an increased degree of stability of
236 kJ mol1 to this molecule compared to the SLTx B pentamer. Although the gas phase experimentally determined values are much lower than the theoretically calculated values of 405.7 and 169.5 kJ mol1, respectively, for monomer-monomer interactions (Table 1), this is to be expected because of the contribution of coulombic repulsion in the fragmenting of the highly charged complexes. The gas phase stability calculation assumes that a single collision has occurred to the precursor ion; however as is the case for large complexes studied here, to reduce the precursor ion intensity by 50%, multiple collisions will occur and contribute to the ECOM value. As gas phase complexes are desolvated before mass analysis, the hydrogen bonding and electrostatic interactions that survive ESI are possibly accountable for maintaining the quaternary structure of the desolvated complexes, whereas the hydrophobic interactions may be lost or partially lost in the gas phase. As such, complete correlation of gas phase and solution phase binding energies would not be expected. Rather, the experimental and theoretical results above show a similar trend, implying that the dominant interactions stabilizing the quaternary structure are maintained in the gas phase and can provide a rough comparison to those in solution. The overwhelming majority of the difference in energy can be accounted for by the presence of a strong hydrogen-bond interaction between E11 in the first monomer with R35 in the second (Fig. 8 C). Also there is a significant area of hydrophobic contact between the N-terminal underside of the additional helix and the top of the nearby sheet from the neighboring monomer (Fig. 8 C). It is important to note that the N-terminal
-helix is held in place by an intramolecular disulphide bridge (C9C86), which therefore helps to maintain a nonplastic surface for the monomers to interact. We propose that although the interface regions between adjacent monomers has a larger surface area in the CTx B pentamer, the additional interactions present in the CTx B helical region (residues 114) may provide the increase in structural stability observed in both the gas and aqueous phase. To further investigate these structural differences in the gas phase, a more detailed comparative study is now required between different B5 pentamers.
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| CONCLUSIONS |
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| ACKNOWLEDGEMENTS |
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This study was supported by a Wellcome Trust program grant (063058/Z/00/Z) to L.M.R.
| FOOTNOTES |
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Submitted on October 20, 2005; accepted for publication January 19, 2006.
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