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* Institute of Biophysics,
Department of Internal Medicine I, and
Institute of General Zoology and Endocrinology, University of Ulm, 89069 Ulm, Germany; and
Department of Physics, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801
Correspondence: Address reprint requests to Gerd Ulrich Nienhaus, University of Ulm, Institute of Biophysics, 89069 Ulm, Germany. Tel.: 49-731-50-23050; Fax: 49-731-50-23059; E-mail: uli{at}uiuc.edu.
| ABSTRACT |
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| INTRODUCTION |
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This development in fluorescence microscopy was further spurred by the widespread application of genetically encoded fluorescent marker proteins (FPs). They can be fused to almost any target protein at the DNA level and thus are powerful tools for probing gene expression, protein localization, or protein-protein interaction in the cellular environment. Exciting new possibilities have emerged from the advent of photoactivatable FPs (5
). These optical marker proteins allow the fluorescence emission intensity or color to be controlled by irradiation with light at specific wavelengths (6
10
). We have recently identified and characterized EosFP, a protein that can be irreversibly switched from green to red emission by illumination with
400-nm light, which induces a photochemical modification of the chromophore (10
12
). Photoactivatable proteins have been recognized as key tools with which to achieve subdiffraction imaging (13
,14
) and, moreover, they enable localized photoactivation in subcellular regions and subsequent in vivo tracking of the marked proteins. In standard fluorescence microscopy using one-photon excitation (OPE), the optically marked region is limited by the size of the illuminating laser spot in the lateral dimensions, but there is no selective photoactivation along the axial dimension. However, confinement in all three spatial dimensions is possible by using two-photon activation (TPA), as shown for the photoactivatable proteins PA-GFP (15
), KikG (16
), and EosFP (17
).
3D imaging of subcellular territories requires high resolution in all three dimensions, which can be achieved by optical sectioning using confocal or multiphoton microscopy. Here again, the axial dimension is the most critical, with a resolution three to four times lower than in the image plane. To improve the axial resolution, 4Pi confocal microscopy was introduced, featuring a coherent superposition of two spherical wavefronts by means of two opposing lenses (1
). 4Pi microscopy types A, B, and C are distinguished, depending on the coherent superposition of the exciting light, emitted light, or both, respectively. Over the years, Hell and co-workers have developed 4Pi confocal microscopy into a reliable technique for high resolution optical microscopy (2
,18
21
), and a commercial instrument (Leica TCS 4Pi) has recently become available. In 4Pi microscopy, the opposing wavefronts generate an interference pattern along the axial direction that consists of a sharp central maximum with a full width at half-maximum of
100 nm and a series of side lobes due to the incomplete solid angle of the interfering waves. A combination of strategies is pursued to achieve sufficient suppression of the interference side lobes. In 4Pi microscopy of type A, confocal detection and two-photon excitation (TPE) are usually employed in conjunction. Thereby, the side lobes can be suppressed to <25% of the main peak, which enables reliable image reconstruction by deconvolution. The resulting axial resolution of
100 nm is excellent for 3D tracking of protein subpopulations carrying a photoactivated label.
In this study, we have combined 3D optical marking of subcellular regions and 4Pi confocal microscopy using EosFP. Efficient TPE in 4Pi microscopy and TPA for 3D-localized optical marking require a thorough characterization of the respective nonlinear properties of the marker protein. Therefore, we have measured the spectral dependencies of TPA and TPE of the green form of EosFP as well as the TPE cross sections for both the green and the red forms. This knowledge allowed us to select optimal imaging parameters in a cellular application using EosFP fused to a mitochondrial targeting signal in HeLa cells. After two-photon conversion of a small subregion within the mitochondrial network of HeLa cells, the photoactivated volume was resolved in a 3D reconstruction from a dual-color 4Pi image stack.
| MATERIALS AND METHODS |
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For the determination of TPE cross sections of the green and red forms of EosFP, fluorescein and rhodamine 6G were used as reference dyes, with TPE cross sections reported as 26 GM (1 GM = 1050 cm4 s) at 920 nm (22
) and 3.6 GM at 1064 nm (23
,24
), respectively. To account for the spectral dependencies of the pulse duration, 
2/
, and the excited volume, V
3, the excitation powers were corrected according to
![]() | (1) |
Here, the reference values were taken at 920 nm; Pexp is the measured laser power. For the wavelength-dependent TPA experiments with EosFP on surfaces, the power density was corrected according to the diffraction-limited illuminated area, S
2. The laser pulse duration was kept constant at 160 fs throughout the wavelength range.
4Pi microscopy
TPA of EosFP in cells with subsequent 4Pi imaging was performed on a commercial 4Pi microscope with TPE (Leica TCS 4Pi, Leica Microsystems, Mannheim, Germany), using a matched pair of opposing objective lenses (HCX PL APO 100x/1.35 GLYC CORR CS, Leica Microsystems) to achieve a coherent superposition of two exciting wavefronts (4Pi type A). For TPE of EosFP, the picosecond Ti:Sapphire laser (Mai Tai, Spectra Physics) was tuned to 970 nm, whereas TPA was performed at 810 nm. 4Pi image stacks were recorded as y-stacked xz-scans with a typical voxel size of 15 x 15 x 30 nm in a green (500530 nm) and a red (572648 nm) spectral channel, using APD detectors. The pinhole size was set to 1 airy unit, and bidirectional scans were performed with a scanning rate of 400 lines per second. Eight lines were averaged; frame accumulation was set to 24. For photoconversion, a particular spot within the cell was illuminated for 20 s with an excitation power of 1.6 mW at the entrance of the microscope, corresponding to
80 µW at the sample (upper objective only). Image processing was limited to blurring, cross talk correction, and a one-dimensional linear three-point deconvolution with the ImSpector software package (25
). This procedure removes side lobe artifacts without introducing any resolution enhancement. After rescaling, overlays were generated from the images of the red and the green channels. Volume rendering of the image stacks was performed using the program Voxx (26
).
Sample preparation
EosFP was expressed in Escherichia coli (BL21 DE3) and purified as described (17
). For the spectroscopic experiments, the sample was prepared in a sandwich of two glass coverslips separated by Mylar foils. TPE experiments were performed with micromolar concentrations of EosFP dissolved in 100 mM sodium phosphate buffer at pH 7. Solutions of fluorescein (Sigma-Aldrich, Seelze, Germany) at pH 11 and rhodamine 6G (Lambda Physik, Göttingen, Germany) in methanol were used as reference standards. TPA experiments were performed on a dense layer of EosFP immobilized on a bovine serum albumin (BSA) coated surface via biotin-streptavidin coupling (17
).
For 4Pi microscopy, HeLa cells (ATCC CCL 2) were grown at 37°C under 5% CO2 in Dulbecco's modified Eagle's medium (Gibco, Karlsruhe, Germany) supplemented with 10% fetal calf serum. A total of 2 x 105 cells was plated on circular quartz coverslips (Leica) in 6-cm diameter dishes. After 16 h, the cells were transfected with 2 µg of the expression vector pcDNA3-mt-EosFP using the FuGENE transfection reagent (Roche, Mannheim, Germany). In this vector, cDNA coding for EosFP is fused to cDNA coding for the mitochondrial (mt) targeting signal from subunit VIII of cytochrome c oxidase (10
). By means of this targeting sequence, the expressed protein, mt-EosFP, localizes in the mitochondria of transfected HeLa cells. Cells were rinsed with phosphate buffered saline (PBS; Gibco) 24 h after transfection and fixed with 4% paraformaldehyde (PFA, Merck, Darmstadt, Germany) for 10 min at room temperature. Sandwiches of two coverslips were assembled with PBS/glycerol (13%:87%, v/v) as a mounting medium. All experiments were carried out in temperature-controlled laboratories at 22°C.
| RESULTS AND DISCUSSION |
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![]() | (2) |
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), and spectral detection efficiencies (
) of the sample (subscript "1") and a reference solution of known TPE cross section (subscript "2"). Using fluorescein as a reference, the TPE cross section of the green form of EosFP was determined as 2.0 ± 0.5 GM at 920 nm. All wavelength-dependent TPE determinations were scaled to this value, including corrections for the spectral dependencies of spot size and pulse duration. The TPE spectrum of the green form of EosFP in Fig. 1 shows a maximum cross section of 19 ± 5 GM at the wavelength of 1000 ± 5 nm, which lies in the range reported for other autofluorescent proteins (27
The TPE spectrum of EosFP displays vibronic structure, most prominently a well-resolved vibronic band at
940 nm, whereas the corresponding OPE spectrum shows only a shoulder. An exact coincidence of the spectra is not expected because the selection rules for OPE and TPE are different, and the two types of electronic transition are likely coupled to different vibrational modes (28
30
), as is also apparent from the different vibronic features in the OPE and TPE spectra of EosFP in Fig. 1.
The TPE spectrum of the red form of EosFP is expected to have a maximum at
1150 nm. No laser is available in our laboratory to cover this range; and, therefore, we determined the TPE properties of the red form of EosFP only at 1064 nm, a laser wavelength used by many laboratories. For comparison, we have also studied TPE of eqFP611, a far-red fluorescent protein which we have investigated recently (31
33
). Fig. 2 shows the dependence of the fluorescence intensity on the squared power for the two autofluorescent proteins and our reference sample, rhodamine 6G. Sublinear behavior is noticeable at higher powers due to ground state depletion, blinking, and photobleaching. Therefore, we only took the data below 20 mW to determine the slopes. By referencing them to rhodamine 6G, we obtained TPE cross sections of 4.2 ± 0.3 GM for eqFP611 and 5.0 ± 0.4 GM for the red form of EosFP.
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where the saturation amplitude, Csat, depends on the total density of fluorophores in the sample, and the saturation power, Psat, reflects the inverse two-photon conversion cross section under the given experimental conditions. The solid line in Fig. 4 A represents a fit of the model to the data, which yields a saturation power of Psat = 3.7 mW. This value is well below the power limit of
10 mW, above which damage was reported to become significant in live cell imaging (34
This behavior coincides with the expectation from the one-photon photoconversion action spectrum of EosFP, which is tightly associated with the protonated state (10
,11
). Interestingly, a shoulder appears in the TPA spectrum at 830 nm, which closely matches the wavelength of three-photon excitation of aromatic amino acids. It is known that the EosFP chromophore can be efficiently excited at 280 nm via resonance energy transfer (10
), and the shoulder at 830 nm in Fig. 4 B suggests that photoactivation can also occur by excitation of aromatic amino acids near the chromophore. From a practical point of view, wavelengths below 800 nm are less attractive for TPA, as they bear an increasing risk of additional one-photon processes even for weak transitions due to the rather high powers applied. The increased multiphoton absorption of the surrounding protein matrix may also lead to deviations from the expected spectral shape below 800 nm, as was found for the TPA of PA-GFP (15
).
4Pi microscopy and 3D localized optical marking with EosFP
In Fig. 5, we compare images of mitochondria from a HeLa cell transfected with mt-EosFP in an xz projection. The 3D PSF in conventional two-photon confocal microscopy has the shape of an ellipsoid that is strongly elongated in the axial direction and does not allow objects to be resolved that are closer than
500800 nm in the axial direction. By contrast, 4Pi confocal microscopy has an excellent axial resolution and is clearly capable of resolving mitochondrial structures in great detail. Interconnections and gaps between the tubular structures, which are completely obscured in conventional confocal microscopy with 488-nm OPE (Fig. 5 A), can be discerned in the 970-nm TPE 4Pi image of the same region after deconvolution (Fig. 5 B). 4Pi microscopy thus enables 3D image reconstructions of mitochondrial networks with comparable resolution in all three spatial dimensions using the Leica TCS 4Pi.
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| CONCLUSIONS |
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| SUPPLEMENTARY MATERIAL |
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| ACKNOWLEDGEMENTS |
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We gratefully acknowledge financial support by the Deutsche Forschungsgemeinschaft (grants Ni291/4 and Ni291/5, SFB 497 and SFB 569) and the Fonds der Chemischen Industrie.
Submitted on December 20, 2006; accepted for publication February 12, 2007.
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