help button home button Biophys. J.
HOME HELP FEEDBACK SUBSCRIPTIONS ARCHIVE SEARCH TABLE OF CONTENTS

Originally published as Biophys J. BioFAST on January 28, 2005.
doi:10.1529/biophysj.104.045260
This Article
Right arrow Full Text
Right arrow Full Text (PDF)
Right arrow All Versions of this Article:
biophysj.104.045260v1
88/4/2403    most recent
Right arrow Alert me when this article is cited
Right arrow Alert me if a correction is posted
Services
Right arrow Similar articles in this journal
Right arrow Similar articles in PubMed
Right arrow Alert me to new issues of the journal
Right arrow Download to citation manager
Right arrow reprints & permissions
Citing Articles
Right arrow Citing Articles via HighWire
Right arrow Citing Articles via Google Scholar
Google Scholar
Right arrow Articles by Ventura, A. C.
Right arrow Articles by Ponce Dawson, S.
Right arrow Search for Related Content
PubMed
Right arrow PubMed Citation
Right arrow Articles by Ventura, A. C.
Right arrow Articles by Ponce Dawson, S.
Biophysical Journal 88:2403-2421 (2005)
© 2005 The Biophysical Society

A Model-Independent Algorithm to Derive Ca2+ Fluxes Underlying Local Cytosolic Ca2+ Transients

Alejandra C. Ventura *, Luciana Bruno *, Angelo Demuro {dagger}, Ian Parker {dagger} and Silvina Ponce Dawson * {ddagger}

* Departamento de Física, Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Buenos Aires, Argentina; {dagger} Department of Neurobiology and Behavior, University of California, Irvine, California; and {ddagger} T10-Theoretical Biology and Biophysics Group, Los Alamos National Laboratory, Los Alamos, New Mexico

Correspondence: Address reprint requests to Silvina M. Ponce Dawson, PhD, Tel.: 54-11-4576-3353; E-mail: silvina{at}df.uba.ar.

Local intracellular Ca2+ signals result from Ca2+ flux into the cytosol through individual channels or clusters of channels. To gain a mechanistic understanding of these events we need to know the magnitude and spatial distribution of the underlying Ca2+ flux. However, this is difficult to infer from fluorescence Ca2+ images because the distribution of Ca2+-bound dye is affected by poorly characterized processes including diffusion of Ca2+ ions, their binding to mobile and immobile buffers, and sequestration by Ca2+ pumps. Several methods have previously been proposed to derive Ca2+ flux from fluorescence images, but all require explicit knowledge or assumptions regarding these processes. We now present a novel algorithm that requires few assumptions and is largely model-independent. By testing the algorithm with both numerically generated image data and experimental images of sparklets resulting from Ca2+ flux through individual voltage-gated channels, we show that it satisfactorily reconstructs the magnitude and time course of the underlying Ca2+ currents.




This article has been cited by other articles:


Home page
Biophys. JHome page
J. Shuai, H. J. Rose, and I. Parker
The Number and Spatial Distribution of IP3 Receptors Underlying Calcium Puffs in Xenopus Oocytes
Biophys. J., December 1, 2006; 91(11): 4033 - 4044.
[Abstract] [Full Text] [PDF]


Home page
Biophys. JHome page
D. Fraiman, B. Pando, S. Dargan, I. Parker, and S. P. Dawson
Analysis of Puff Dynamics in Oocytes: Interdependence of Puff Amplitude and Interpuff Interval
Biophys. J., June 1, 2006; 90(11): 3897 - 3907.
[Abstract] [Full Text] [PDF]


Home page
JGPHome page
A. Demuro and I. Parker
"Optical Patch-clamping": Single-channel Recording by Imaging Ca2+ Flux through Individual Muscle Acetylcholine Receptor Channels
J. Gen. Physiol., August 29, 2005; 126(3): 179 - 192.
[Abstract] [Full Text] [PDF]




HOME HELP FEEDBACK SUBSCRIPTIONS ARCHIVE SEARCH TABLE OF CONTENTS
Copyright © 2005 by the Biophysical Society.