NEW AND NOTABLE:

NA Dencher

Bacteriorhodopsin: A Spectroscopic Intermediate with Two Conformations and Three Relay Events Is Voltage Sensitive
Biophys. J. 1998 74: 1-2. [Full Text] [PDF]  

BIOPHYSICAL THEORY AND MODELING:

Q Zhong, Q Jiang, PB Moore, DM Newns, and ML Klein

Molecular dynamics simulation of a synthetic ion channel
Biophys. J. 1998 74: 3-10. [Abstract] [Full Text] [PDF]  

J Karolin, M Fa, M Wilczynska, T Ny, and LB Johansson

Donor-donor energy migration for determining intramolecular distances in proteins: I. Application of a model to the latent plasminogen activator inhibitor-1 (PAI-1)
Biophys. J. 1998 74: 11-21. [Abstract] [Full Text] [PDF]  

LA Taber

An optimization principle for vascular radius including the effects of smooth muscle tone
Biophys. J. 1998 74: 109-114. [Abstract] [Full Text] [PDF]  

TB Woolf

Molecular dynamics simulations of individual alpha-helices of bacteriorhodopsin in dimyristoylphosphatidylcholine. II. Interaction energy analysis
Biophys. J. 1998 74: 115-131. [Abstract] [Full Text] [PDF]  

Amir Ahsan, Joseph Rudnick, and Robijn Bruinsma

Elasticity Theory of the B-DNA to S-DNA Transition
Biophys. J. 1998 74: 132-137. [Abstract] [Full Text] [PDF]  

RB Sessions, N Gibbs, and CE Dempsey

Hydrogen bonding in helical polypeptides from molecular dynamics simulations and amide hydrogen exchange analysis: alamethicin and melittin in methanol
Biophys. J. 1998 74: 138-152. [Abstract] [Full Text] [PDF]  

A Peskoff and GA Langer

Calcium concentration and movement in the ventricular cardiac cell during an excitation-contraction cycle
Biophys. J. 1998 74: 153-174. [Abstract] [Full Text] [PDF]  

MD Levin, CJ Morton-Firth, WN Abouhamad, RB Bourret, and D Bray

Origins of individual swimming behavior in bacteria
Biophys. J. 1998 74: 175-181. [Abstract] [Full Text] [PDF]  

WW Parson, ZT Chu, and A Warshel

Reorganization energy of the initial electron-transfer step in photosynthetic bacterial reaction centers
Biophys. J. 1998 74: 182-191. [Abstract] [Full Text] [PDF]  

CHANNELS, RECEPTORS, AND TRANSPORTERS:

S Kuyucak, M Hoyles, and SH Chung

Analytical solutions of Poisson's equation for realistic geometrical shapes of membrane ion channels
Biophys. J. 1998 74: 22-36. [Abstract] [Full Text] [PDF]  

SC Li, M Hoyles, S Kuyucak, and SH Chung

Brownian dynamics study of ion transport in the vestibule of membrane channels
Biophys. J. 1998 74: 37-47. [Abstract] [Full Text] [PDF]  

P Rath, WJ DeGrip, and KJ Rothschild

Photoactivation of rhodopsin causes an increased hydrogen-deuterium exchange of buried peptide groups
Biophys. J. 1998 74: 192-198. [Abstract] [Full Text] [PDF]  

Y Sohma, A Harris, BE Argent, and MA Gray

A novel type of internal barium block of a maxi-K+ channel from human vas deferens epithelial cells
Biophys. J. 1998 74: 199-209. [Abstract] [Full Text] [PDF]  

Mark M. Millonas and Dorothy A. Hanck

Nonequilibrium Response Spectroscopy of Voltage-Sensitive Ion Channel Gating
Biophys. J. 1998 74: 210-229. [Abstract] [Full Text] [PDF]  

Z Zhou, Q Gong, B Ye, Z Fan, JC Makielski, GA Robertson, and CT January

Properties of HERG channels stably expressed in HEK 293 cells studied at physiological temperature
Biophys. J. 1998 74: 230-241. [Abstract] [Full Text] [PDF]  

DB Tikhonov and BS Zhorov

Kinked-helices model of the nicotinic acetylcholine receptor ion channel and its complexes with blockers: simulation by the Monte Carlo minimization method
Biophys. J. 1998 74: 242-255. [Abstract] [Full Text] [PDF]  

JM Tomich, D Wallace, K Henderson, KE Mitchell, G Radke, R Brandt, CA Ambler, AJ Scott, J Grantham, L Sullivan, and T Iwamoto

Aqueous solubilization of transmembrane peptide sequences with retention of membrane insertion and function
Biophys. J. 1998 74: 256-267. [Abstract] [Full Text] [PDF]  

JP Ding, ZW Li, and CJ Lingle

Inactivating BK channels in rat chromaffin cells may arise from heteromultimeric assembly of distinct inactivation-competent and noninactivating subunits
Biophys. J. 1998 74: 268-289. [Abstract] [Full Text] [PDF]  

F Kamp, P Donoso, and C Hidalgo

Changes in luminal pH caused by calcium release in sarcoplasmic reticulum vesicles
Biophys. J. 1998 74: 290-296. [Abstract] [Full Text] [PDF]  

MEMBRANES:

T Shangguan, DP Siegel, JD Lear, PH Axelsen, D Alford, and J Bentz

Morphological changes and fusogenic activity of influenza virus hemagglutinin
Biophys. J. 1998 74: 54-62. [Abstract] [Full Text] [PDF]  

R Simson, B Yang, SE Moore, P Doherty, FS Walsh, and KA Jacobson

Structural mosaicism on the submicron scale in the plasma membrane
Biophys. J. 1998 74: 297-308. [Abstract] [Full Text] [PDF]  

P Brocca, P Berthault, and S Sonnino

Conformation of the oligosaccharide chain of G(M1) ganglioside in a carbohydrate-enriched surface
Biophys. J. 1998 74: 309-318. [Abstract] [Full Text] [PDF]  

S Paula, AG Volkov, and DW Deamer

Permeation of halide anions through phospholipid bilayers occurs by the solubility-diffusion mechanism
Biophys. J. 1998 74: 319-327. [Abstract] [Full Text] [PDF]  

M Goulian, ON Mesquita, DK Fygenson, C Nielsen, OS Andersen, and A Libchaber

Gramicidin channel kinetics under tension
Biophys. J. 1998 74: 328-337. [Abstract] [Full Text] [PDF]  

S Ali, JM Smaby, MM Momsen, HL Brockman, and RE Brown

Acyl chain-length asymmetry alters the interfacial elastic interactions of phosphatidylcholines
Biophys. J. 1998 74: 338-348. [Abstract] [Full Text] [PDF]  

MUSCLE AND CONTRACTILITY:

JQ Zhang, A Weisberg, and R Horowits

Expression and purification of large nebulin fragments and their interaction with actin
Biophys. J. 1998 74: 349-359. [Abstract] [Full Text] [PDF]  

JR Patel, GM Diffee, XP Huang, and RL Moss

Phosphorylation of myosin regulatory light chain eliminates force- dependent changes in relaxation rates in skeletal muscle
Biophys. J. 1998 74: 360-368. [Abstract] [Full Text] [PDF]  

E Pate, K Franks-Skiba, and R Cooke

Depletion of phosphate in active muscle fibers probes actomyosin states within the powerstroke
Biophys. J. 1998 74: 369-380. [Abstract] [Full Text] [PDF]  

NUCLEIC ACIDS:

C Krafft, W Hinrichs, P Orth, W Saenger, and H Welfle

Interaction of Tet repressor with operator DNA and with tetracycline studied by infrared and Raman spectroscopy
Biophys. J. 1998 74: 63-71. [Abstract] [Full Text] [PDF]  

E. Raspaud, M. Olvera, de la Cruz, J.-L. Sikorav, and F. Livolant

Precipitation of DNA by Polyamines: A Polyelectrolyte Behavior
Biophys. J. 1998 74: 381-393. [Abstract] [Full Text] [PDF]  

J Norberg and L Nilsson

Solvent influence on base stacking
Biophys. J. 1998 74: 394-402. [Abstract] [Full Text] [PDF]  

PHOTOBIOPHYSICS:

G Nagel, B Kelety, B Mockel, G Buldt, and E Bamberg

Voltage dependence of proton pumping by bacteriorhodopsin is regulated by the voltage-sensitive ratio of M1 to M2
Biophys. J. 1998 74: 403-412. [Abstract] [Full Text] [PDF]  

PROTEINS:

P Derreumaux and T Schlick

The loop opening/closing motion of the enzyme triosephosphate isomerase
Biophys. J. 1998 74: 72-81. [Abstract] [Full Text] [PDF]  

L Swint-Kruse, KS Matthews, PE Smith, and BM Pettitt

Comparison of simulated and experimentally determined dynamics for a variant of the Lacl DNA-binding domain, Nlac-P
Biophys. J. 1998 74: 413-421. [Abstract] [Full Text] [PDF]  

D Matulis and R Lovrien

1-Anilino-8-naphthalene sulfonate anion-protein binding depends primarily on ion pair formation
Biophys. J. 1998 74: 422-429. [Abstract] [Full Text] [PDF]  

SUPRAMOLECULAR ASSEMBLIES:

P Mariani, F Ciuchi, and L Saturni

Helix-specific interactions induce condensation of guanosine four- stranded helices in concentrated salt solutions
Biophys. J. 1998 74: 430-435. [Abstract] [Full Text] [PDF]  

S Koroyasu, M Yamazato, T Hirano, and SI Aizawa

Kinetic analysis of the growth rate of the flagellar hook in Salmonella typhimurium by the population balance method
Biophys. J. 1998 74: 436-443. [Abstract] [Full Text] [PDF]  

SPECTROSCOPY, IMAGING, OTHER TECHNIQUES:

O Zohar, M Ikeda, H Shinagawa, H Inoue, H Nakamura, D Elbaum, DL Alkon, and T Yoshioka

Thermal imaging of receptor-activated heat production in single cells
Biophys. J. 1998 74: 82-89. [Abstract] [Full Text] [PDF]  

B Demeler and H Saber

Determination of molecular parameters by fitting sedimentation data to finite-element solutions of the Lamm equation
Biophys. J. 1998 74: 444-454. [Abstract] [Full Text] [PDF]  

S Ohnishi, M Murata, and M Hato

Correlation between surface morphology and surface forces of protein A adsorbed on mica
Biophys. J. 1998 74: 455-465. [Abstract] [Full Text] [PDF]  

P Schuck, CE MacPhee, and GJ Howlett

Determination of sedimentation coefficients for small peptides
Biophys. J. 1998 74: 466-474. [Abstract] [Full Text] [PDF]  

CELL BIOPHYSICS:

AL Kindzelskii, MJ Zhou, RP Haugland, LA Boxer, and HR Petty

Oscillatory pericellular proteolysis and oxidant deposition during neutrophil locomotion
Biophys. J. 1998 74: 90-97. [Abstract] [Full Text] [PDF]  

E Neumann, K Toensing, S Kakorin, P Budde, and J Frey

Mechanism of electroporative dye uptake by mouse B cells
Biophys. J. 1998 74: 98-108. [Abstract] [Full Text] [PDF]  

I Fatt, CJ Giasson, and TD Mueller

Non-steady-state diffusion in a multilayered tissue initiated by manipulation of chemical activity at the boundaries
Biophys. J. 1998 74: 475-486. [Abstract] [Full Text] [PDF]  

Y Moriyama, S Hiyama, and H Asai

High-speed video cinematographic demonstration of stalk and zooid contraction of Vorticella convallaria
Biophys. J. 1998 74: 487-491. [Abstract] [Full Text] [PDF]  

JW Piper, RA Swerlick, and C Zhu

Determining force dependence of two-dimensional receptor-ligand binding affinity by centrifugation
Biophys. J. 1998 74: 492-513. [Abstract] [Full Text] [PDF]  

R Simson, E Wallraff, J Faix, J Niewohner, G Gerisch, and E Sackmann

Membrane bending modulus and adhesion energy of wild-type and mutant cells of Dictyostelium lacking talin or cortexillins
Biophys. J. 1998 74: 514-522. [Abstract] [Full Text] [PDF]  

JY Chatton, Y Cao, and JW Stucki

Perturbation of myo-inositol-1,4,5-trisphosphate levels during agonist- induced Ca2+ oscillations
Biophys. J. 1998 74: 523-531. [Abstract] [Full Text] [PDF]  

ELECTROPHYSIOLOGY:

J Zhang, RM Davidson, MD Wei, and LM Loew

Membrane electric properties by combined patch clamp and fluorescence ratio imaging in single neurons
Biophys. J. 1998 74: 48-53. [Abstract] [Full Text] [PDF]  

CASPAR SYMPOSIUM:

Carolyn Cohen

Good Times with Don Caspar
Biophys. J. 1998 74: 532-533. [Full Text] [PDF]  

L Makowski

An unreasonable man in a quasi-equivalent world
Biophys. J. 1998 74: 534-536. [Full Text] [PDF]  

SB Malinchik, H Inouye, KE Szumowski, and DA Kirschner

Structural analysis of Alzheimer's beta(1-40) amyloid: protofilament assembly of tubular fibrils
Biophys. J. 1998 74: 537-545. [Abstract] [Full Text] [PDF]  

VS Reddy, HA Giesing, RT Morton, A Kumar, CB Post, CL Brooks, 3rd, and JE Johnson

Energetics of quasiequivalence: computational analysis of protein- protein interactions in icosahedral viruses
Biophys. J. 1998 74: 546-558. [Abstract] [Full Text] [PDF]  

PA Thuman-Commike, B Greene, JA Malinski, J King, and W Chiu

Role of the scaffolding protein in P22 procapsid size determination suggested by T = 4 and T = 7 procapsid structures
Biophys. J. 1998 74: 559-568. [Abstract] [Full Text] [PDF]  

K Hasegawa, I Yamashita, and K Namba

Quasi- and nonequivalence in the structure of bacterial flagellar filament
Biophys. J. 1998 74: 569-575. [Abstract] [Full Text] [PDF]  

ZH Zhou, W Chiu, K Haskell, H Spears, Jr, J Jakana, FJ Rixon, and LR Scott

Refinement of herpesvirus B-capsid structure on parallel supercomputers
Biophys. J. 1998 74: 576-588. [Abstract] [Full Text] [PDF]  

J Frank and RK Agrawal

The movement of tRNA through the ribosome
Biophys. J. 1998 74: 589-594. [Abstract] [Full Text] [PDF]  

R Diaz-Avalos and DL Caspar

Structure of the stacked disk aggregate of tobacco mosaic virus protein
Biophys. J. 1998 74: 595-603. [Abstract] [Full Text] [PDF]  

B Bhyravbhatla, SJ Watowich, and DL Caspar

Refined atomic model of the four-layer aggregate of the tobacco mosaic virus coat protein at 2.4-A resolution
Biophys. J. 1998 74: 604-615. [Abstract] [Full Text] [PDF]  

B Yu and DL Caspar

Structure of cubic insulin crystals in glucose solutions
Biophys. J. 1998 74: 616-622. [Abstract] [Full Text] [PDF]  

E Bullitt and L Makowski

Bacterial adhesion pili are heterologous assemblies of similar subunits
Biophys. J. 1998 74: 623-632. [Abstract] [Full Text] [PDF]  

H Wang, A Planchart, and G Stubbs

Caspar carboxylates: the structural basis of tobamovirus disassembly
Biophys. J. 1998 74: 633-638. [Abstract] [Full Text] [PDF]  

MS Chapman

Watching one's P's and Q's: promiscuity, plasticity, and quasiequivalence in a T = 1 virus
Biophys. J. 1998 74: 639-644. [Abstract] [Full Text] [PDF]  

R Oldenbourg, ED Salmon, and PT Tran

Birefringence of single and bundled microtubules
Biophys. J. 1998 74: 645-654. [Abstract] [Full Text] [PDF]  

XQ Mu, L Makowski, and B Magdoff-Fairchild

Analysis of the stability of hemoglobin S double strands
Biophys. J. 1998 74: 655-668. [Abstract] [Full Text] [PDF]  

M Adams and S Fraden

Phase behavior of mixtures of rods (tobacco mosaic virus) and spheres (polyethylene oxide, bovine serum albumin)
Biophys. J. 1998 74: 669-677. [Abstract] [Full Text] [PDF]  

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