BIOPHYSICAL THEORY AND MODELING:

Leping Li, Thomas A. Darden, L. Bartolotti, Dorothea Kominos, and Lee G. Pedersen

An Atomic Model for the Pleated -Sheet Structure of A Amyloid Protofilaments
Biophys. J. 1999 76: 2871-2878. [Abstract] [Full Text] [PDF]  

D. I. Svergun

Restoring Low Resolution Structure of Biological Macromolecules from Solution Scattering Using Simulated Annealing
Biophys. J. 1999 76: 2879-2886. [Abstract] [Full Text] [PDF]  

Zorica Pantic-Tanner and Don Eden

Calculation of Protein Form Birefringence Using the Finite Element Method
Biophys. J. 1999 76: 2943-2950. [Abstract] [Full Text] [PDF]  

Yuri A. Chizmadzhev, Dimetry A. Kumenko, Peter I. Kuzmin, Leonid V. Chernomordik, Joshua Zimmerberg, and Fredric S. Cohen

Lipid Flow through Fusion Pores Connecting Membranes of Different Tensions
Biophys. J. 1999 76: 2951-2965. [Abstract] [Full Text] [PDF]  

Christoph A. Sotriffer, Wolfgang Flader, Alan Cooper, Bernd M. Rode, D. Scott Linthicum, Klaus R. Liedl, and Janos M. Varga

Ligand Binding by Antibody IgE Lb4: Assessment of Binding Site Preferences Using Microcalorimetry, Docking, and Free Energy Simulations
Biophys. J. 1999 76: 2966-2977. [Abstract] [Full Text] [PDF]  

António M. Baptista, Paulo J. Martel, and Cláudio M. Soares

Simulation of Electron-Proton Coupling with a Monte Carlo Method: Application to Cytochrome c₃ Using Continuum Electrostatics
Biophys. J. 1999 76: 2978-2998. [Abstract] [Full Text] [PDF]  

Roberto D. Lins, James M. Briggs, T. P. Straatsma, Heather A. Carlson, Jason Greenwald, Senyon Choe, and J. Andrew McCammon

Molecular Dynamics Studies on the HIV-1 Integrase Catalytic Domain
Biophys. J. 1999 76: 2999-3011. [Abstract] [Full Text] [PDF]  

Jianwei Shuai, Yoshiki Kashimori, Osamu Hoshino, Takeshi Kambara, and Gerhard von der Emde

Electroreceptor Model of Weakly Electric Fish Gnathonemus petersii: II. Cellular Origin of Inverse Waveform Tuning
Biophys. J. 1999 76: 3012-3025. [Abstract] [Full Text] [PDF]  

James C. Weaver, Timothy E. Vaughan, and Gregory T. Martin

Biological Effects Due to Weak Electric and Magnetic Fields: The Temperature Variation Threshold
Biophys. J. 1999 76: 3026-3030. [Abstract] [Full Text] [PDF]  

William S. Hlavacek, Richard G. Posner, and Alan S. Perelson

Steric Effects on Multivalent Ligand-Receptor Binding: Exclusion of Ligand Sites by Bound Cell Surface Receptors
Biophys. J. 1999 76: 3031-3043. [Abstract] [Full Text] [PDF]  

Beatriz Carrasco and José García de la Torre

Hydrodynamic Properties of Rigid Particles: Comparison of Different Modeling and Computational Procedures
Biophys. J. 1999 76: 3044-3057. [Abstract] [Full Text] [PDF]  

CHANNELS, RECEPTORS, AND TRANSPORTERS:

Yi Ri, Juan A. Ballesteros, Charles K. Abrams, Seunghoon Oh, Vytas K. Verselis, Harel Weinstein, and Thaddeus A. Bargiello

The Role of a Conserved Proline Residue in Mediating Conformational Changes Associated with Voltage Gating of Cx32 Gap Junctions
Biophys. J. 1999 76: 2887-2898. [Abstract] [Full Text] [PDF]  

Ricardo C. Araneda, Jian-Yu Lan, Xin Zheng, R. Suzanne Zukin, and Michael V. L. Bennett

Spermine and Arcaine Block and Permeate N-Methyl-D-Aspartate Receptor Channels
Biophys. J. 1999 76: 2899-2911. [Abstract] [Full Text] [PDF]  

Laxma G. Reddy, Yongli Shi, Howard Kutchai, Adelaida G. Filoteo, John T. Penniston, and David D. Thomas

An Autoinhibitory Peptide from the Erythrocyte Ca-ATPase Aggregates and Inhibits Both Muscle Ca-ATPase Isoforms
Biophys. J. 1999 76: 3058-3065. [Abstract] [Full Text] [PDF]  

Eitan Gross and Ulrich Hopfer

Effects of pH on Kinetic Parameters of the Na-HCO₃ Cotransporter in Renal Proximal Tubule
Biophys. J. 1999 76: 3066-3075. [Abstract] [Full Text] [PDF]  

Shalini Gera and Lou Byerly

Measurement of Calcium Channel Inactivation Is Dependent upon the Test Pulse Potential
Biophys. J. 1999 76: 3076-3088. [Abstract] [Full Text] [PDF]  

Xiang D. Tang and Toshinori Hoshi

Rundown of the Hyperpolarization-Activated KAT1 Channel Involves Slowing of the Opening Transitions Regulated by Phosphorylation
Biophys. J. 1999 76: 3089-3098. [Abstract] [Full Text] [PDF]  

Brenda L. Moss, Shai D. Silberberg, Crina M. Nimigean, and Karl L. Magleby

Ca²⁺-Dependent Gating Mechanisms for dSlo, a Large-Conductance Ca²⁺-Activated K⁺ (BK) Channel
Biophys. J. 1999 76: 3099-3117. [Abstract] [Full Text] [PDF]  

Ziv Gil, Karl L. Magleby, and Shai D. Silberberg

Membrane-Pipette Interactions Underlie Delayed Voltage Activation of Mechanosensitive Channels in Xenopus Oocytes
Biophys. J. 1999 76: 3118-3127. [Abstract] [Full Text] [PDF]  

Jing-Song Fan, Min Jiang, Wen Dun, Thomas V. McDonald, and Gea-Ny Tseng

Effects of Outer Mouth Mutations on hERG Channel Function: A Comparison with Similar Mutations in the Shaker Channel
Biophys. J. 1999 76: 3128-3140. [Abstract] [Full Text] [PDF]  

Sho-Ya Wang and Ging Kuo Wang

Batrachotoxin-Resistant Na⁺ Channels Derived from Point Mutations in Transmembrane Segment D4-S6
Biophys. J. 1999 76: 3141-3149. [Abstract] [Full Text] [PDF]  

MEMBRANES:

Gregory C. Troiano, Kathleen J. Stebe, Robert M. Raphael, and Leslie Tung

The Effects of Gramicidin on Electroporation of Lipid Bilayers
Biophys. J. 1999 76: 3150-3157. [Abstract] [Full Text] [PDF]  

Stefan Huebner, Bronwyn Jean Battersby, Rudo Grimm, and Gregor Cevc

Lipid-DNA Complex Formation: Reorganization and Rupture of Lipid Vesicles in the Presence of DNA As Observed by Cryoelectron Microscopy
Biophys. J. 1999 76: 3158-3166. [Abstract] [Full Text] [PDF]  

Gerhard Schwarz and Susanne E. Taylor

Polymorphism and Interactions of a Viral Fusion Peptide in a Compressed Lipid Monolayer
Biophys. J. 1999 76: 3167-3175. [Abstract] [Full Text] [PDF]  

Thad A. Harroun, William T. Heller, Thomas M. Weiss, Lin Yang, and Huey W. Huang

Theoretical Analysis of Hydrophobic Matching and Membrane-Mediated Interactions in Lipid Bilayers Containing Gramicidin
Biophys. J. 1999 76: 3176-3185. [Abstract] [Full Text] [PDF]  

D. Peter Tieleman, Herman J. C. Berendsen, and Mark S. P. Sansom

Surface Binding of Alamethicin Stabilizes its Helical Structure: Molecular Dynamics Simulations
Biophys. J. 1999 76: 3186-3191. [Abstract] [Full Text] [PDF]  

NUCLEIC ACIDS:

D. Jeremy Williams and Kathleen B. Hall

Unrestrained Stochastic Dynamics Simulations of the UUCG Tetraloop Using an Implicit Solvation Model
Biophys. J. 1999 76: 3192-3205. [Abstract] [Full Text] [PDF]  

Nicolas Foloppe and Alexander D. MacKerell, Jr.

Intrinsic Conformational Properties of Deoxyribonucleosides: Implicated Role for Cytosine in the Equilibrium Among the A, B, and Z Forms of DNA
Biophys. J. 1999 76: 3206-3218. [Abstract] [Full Text] [PDF]  

PHOTOBIOPHYSICS:

György Váró, Leonid S. Brown, Richard Needleman, and Janos K. Lanyi

Binding of Calcium Ions to Bacteriorhodopsin
Biophys. J. 1999 76: 3219-3226. [Abstract] [Full Text] [PDF]  

PROTEINS:

Boguslaw Stec, Robert F. Troxler, and Martha M. Teeter

Crystal Structure of C-Phycocyanin from Cyanidium caldarium Provides a New Perspective on Phycobilisome Assembly
Biophys. J. 1999 76: 2912-2921. [Abstract] [Full Text] [PDF]  

Janet S. W. Holtz, John H. Holtz, Zhenhuan Chi, and Sanford A. Asher

Ultraviolet Raman Examination of the Environmental Dependence of Bombolitin I and Bombolitin III Secondary Structure
Biophys. J. 1999 76: 3227-3234. [Abstract] [Full Text] [PDF]  

Andrew H. A. Clayton and William H. Sawyer

Tryptophan Rotamer Distributions in Amphipathic Peptides at a Lipid Surface
Biophys. J. 1999 76: 3235-3242. [Abstract] [Full Text] [PDF]  

Christopher A. Miles and Michael Ghelashvili

Polymer-in-a-Box Mechanism for the Thermal Stabilization of Collagen Molecules in Fibers
Biophys. J. 1999 76: 3243-3252. [Abstract] [Full Text] [PDF]  

Jinming Gao, Jeffrey Carbeck, Q. Paula Lei, Richard D. Smith, and George M. Whitesides

Probing the Energetics of Dissociation of Carbonic Anhydrase-Ligand Complexes in the Gas Phase
Biophys. J. 1999 76: 3253-3260. [Abstract] [Full Text] [PDF]  

N. Fuller and R. P. Rand

Water in Actin Polymerization
Biophys. J. 1999 76: 3261-3266. [Abstract] [Full Text] [PDF]  

SUPRAMOLECULAR ASSEMBLIES:

Pamela A. Thuman-Commike, Barrie Greene, Justine A. Malinski, Michelle Burbea, Amy McGough, Wah Chiu, and Peter E. Prevelige, Jr.

Mechanism of Scaffolding-Directed Virus Assembly Suggested by Comparison of Scaffolding-Containing and Scaffolding-Lacking P22 Procapsids
Biophys. J. 1999 76: 3267-3277. [Abstract] [Full Text] [PDF]  

SPECTROSCOPY, IMAGING, OTHER TECHNIQUES:

Laura T. Mazzola, Curtis W. Frank, Stephen P. A. Fodor, Curtis Mosher, Raj Lartius, and Eric Henderson

Discrimination of DNA Hybridization Using Chemical Force Microscopy
Biophys. J. 1999 76: 2922-2933. [Abstract] [Full Text] [PDF]  

Eriko Nagao and James A. Dvorak

Phase Imaging by Atomic Force Microscopy: Analysis of Living Homoiothermic Vertebrate Cells
Biophys. J. 1999 76: 3289-3297. [Abstract] [Full Text] [PDF]  

Jeff P. Barnes, Zhichun Liang, Hassane S. Mchaourab, Jack H. Freed, and Wayne L. Hubbell

A Multifrequency Electron Spin Resonance Study of T4 Lysozyme Dynamics
Biophys. J. 1999 76: 3298-3306. [Abstract] [Full Text] [PDF]  

Jun Yang, Ying Huang, Xujing Wang, Xiao-Bo Wang, Frederick F. Becker, and Peter R. C. Gascoyne

Dielectric Properties of Human Leukocyte Subpopulations Determined by Electrorotation as a Cell Separation Criterion
Biophys. J. 1999 76: 3307-3314. [Abstract] [Full Text] [PDF]  

Julia Buitink, Marcus A. Hemminga, and Folkert A. Hoekstra

Characterization of Molecular Mobility in Seed Tissues: An Electron Paramagnetic Resonance Spin Probe Study
Biophys. J. 1999 76: 3315-3322. [Abstract] [Full Text] [PDF]  

CELL BIOPHYSICS:

Louis Amari, Brian Layden, Joyce Nikolakopoulos, Qinfen Rong, Duarte Mota de Freitas, Graça Baltazar, M. Margarida C. A. Castro, and Carlos F. G. C. Geraldes

Competition between Li⁺ and Mg²⁺ in Neuroblastoma SH-SY5Y Cells: A Fluorescence and ³¹P NMR Study
Biophys. J. 1999 76: 2934-2942. [Abstract] [Full Text] [PDF]  

Y. R. Chemla, H. L. Grossman, T. S. Lee, John Clarke, M. Adamkiewicz, and B. B. Buchanan

A New Study of Bacterial Motion: Superconducting Quantum Interference Device Microscopy of Magnetotactic Bacteria
Biophys. J. 1999 76: 3323-3330. [Abstract] [Full Text] [PDF]  

Patricia R. Smith, Ian E. G. Morrison, Keith M. Wilson, Nelson Fernández, and Richard J. Cherry

Anomalous Diffusion of Major Histocompatibility Complex Class I Molecules on HeLa Cells Determined by Single Particle Tracking
Biophys. J. 1999 76: 3331-3344. [Abstract] [Full Text] [PDF]  

K. Asami, E. Gheorghiu, and T. Yonezawa

Real-Time Monitoring of Yeast Cell Division by Dielectric Spectroscopy
Biophys. J. 1999 76: 3345-3348. [Abstract] [Full Text] [PDF]  

BIOENERGETICS:

Sergei Savikhin, Wu Xu, Victor Soukoulis, Parag R. Chitnis, and Walter S. Struve

Ultrafast Primary Processes in Photosystem I of the Cyanobacterium Synechocystis sp. PCC 6803
Biophys. J. 1999 76: 3278-3288. [Abstract] [Full Text] [PDF]  

LETTERS TO THE EDITOR:

Enrico Grazi, Orietta Cintio, Ermes Magri, and Giorgio Trombetta

Reversible Inactivation of Myosin Subfragment-1 Activity by Mechanical Immobilization: A Reappraisal
Biophys. J. 1999 76: 3349-3350. [Full Text] [PDF]  

Stefan Highsmith, Kelly Duignan, Kathy Franks-Skiba, Katherine Polosukhina, and Roger Cooke

Response to Grazi et al.
Biophys. J. 1999 76: 3351(6) [Full Text] [PDF]  

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