BIOPHYSICAL THEORY AND MODELING:

Isabelle Fontaine, David Savéry, and Guy Cloutier

Simulation of Ultrasound Backscattering by Red Cell Aggregates: Effect of Shear Rate and Anisotropy
Biophys. J. 2002 82: 1696-1710. [Abstract] [Full Text] [PDF]  

Peter Tompa, Gábor E. Tusnády, Peter Friedrich, and István Simon

The Role of Dimerization in Prion Replication
Biophys. J. 2002 82: 1711-1718. [Abstract] [Full Text] [PDF]  

Igor Rojdestvenski, Alexander G. Ivanov, M. G. Cottam, Andrei Borodich, Norman P. A. Huner, and Gunnar Öquist

Segregation of Photosystems in Thylakoid Membranes as a Critical Phenomenon
Biophys. J. 2002 82: 1719-1730. [Abstract] [Full Text] [PDF]  

Yiannis N. Kaznessis, Sangtae Kim, and Ronald G. Larson

Simulations of Zwitterionic and Anionic Phospholipid Monolayers
Biophys. J. 2002 82: 1731-1742. [Abstract] [Full Text] [PDF]  

Carla Wofsy and Byron Goldstein

Effective Rate Models for Receptors Distributed in a Layer above a Surface: Application to Cells and Biacore
Biophys. J. 2002 82: 1743-1755. [Abstract] [Full Text] [PDF]  

Ranjan Mukhopadhyay, Gerald Lim H. W., and Michael Wortis

Echinocyte Shapes: Bending, Stretching, and Shear Determine Spicule Shape and Spacing
Biophys. J. 2002 82: 1756-1772. [Abstract] [Full Text] [PDF]  

Victor Levadny, Marco Colombini, Xiao Xian Li, and Vicente M. Aguilella

Electrostatics Explains the Shift in VDAC Gating with Salt Activity Gradient
Biophys. J. 2002 82: 1773-1783. [Abstract] [Full Text] [PDF]  

G. Holzwarth, Keith Bonin, and David B. Hill

Forces Required of Kinesin during Processive Transport through Cytoplasm
Biophys. J. 2002 82: 1784-1790. [Abstract] [Full Text] [PDF]  

Min-yi Shen and Karl F. Freed

Long Time Dynamics of Met-Enkephalin: Comparison of Explicit and Implicit Solvent Models
Biophys. J. 2002 82: 1791-1808. [Abstract] [Full Text] [PDF]  

Matthew D. Levin, Thomas S. Shimizu, and Dennis Bray

Binding and Diffusion of CheR Molecules Within a Cluster of Membrane Receptors
Biophys. J. 2002 82: 1809-1817. [Abstract] [Full Text] [PDF]  

Sagar A. Pandit and Max L. Berkowitz

Molecular Dynamics Simulation of Dipalmitoylphosphatidylserine Bilayer with Na⁺ Counterions
Biophys. J. 2002 82: 1818-1827. [Abstract] [Full Text] [PDF]  

CHANNELS, RECEPTORS, AND TRANSPORTERS:

Denis B. Tikhonov, Jan R. Mellor, Peter N. R. Usherwood, and Lev G. Magazanik

Modeling of the Pore Domain of the GLUR1 Channel: Homology with K⁺ Channel and Binding of Channel Blockers
Biophys. J. 2002 82: 1884-1893. [Abstract] [Full Text] [PDF]  

Don E. Burgess, Oscar Crawford, Brian P. Delisle, and Jonathan Satin

Mechanism of Inactivation Gating of Human T-Type (Low-Voltage Activated) Calcium Channels
Biophys. J. 2002 82: 1894-1906. [Abstract] [Full Text] [PDF]  

Yasser A. Mahmmoud and Flemming Cornelius

Protein Kinase C Phosphorylation of Purified Na,K-ATPase: C-Terminal Phosphorylation Sites at the - and -Subunits Close to the Inner Face of the Plasma Membrane
Biophys. J. 2002 82: 1907-1919. [Abstract] [Full Text] [PDF]  

Cecilia Bouzat, Fernanda Gumilar, María del Carmen Esandi, and Steven M. Sine

Subunit-Selective Contribution to Channel Gating of the M4 Domain of the Nicotinic Receptor
Biophys. J. 2002 82: 1920-1929. [Abstract] [Full Text] [PDF]  

L. Venkataramanan and F. J. Sigworth

Applying Hidden Markov Models to the Analysis of Single Ion Channel Activity
Biophys. J. 2002 82: 1930-1942. [Abstract] [Full Text] [PDF]  

Hui Dong, Jeremy Dunn, and Jonathan Lytton

Stoichiometry of the Cardiac Na⁺/Ca²⁺ Exchanger NCX1.1 Measured in Transfected HEK Cells
Biophys. J. 2002 82: 1943-1952. [Abstract] [Full Text] [PDF]  

Fiona Mead and Alan J. Williams

Block of the Ryanodine Receptor Channel by Neomycin Is Relieved at High Holding Potentials
Biophys. J. 2002 82: 1953-1963. [Abstract] [Full Text] [PDF]  

Fiona Mead and Alan J. Williams

Ryanodine-Induced Structural Alterations in the RyR Channel Suggested by Neomycin Block
Biophys. J. 2002 82: 1964-1974. [Abstract] [Full Text] [PDF]  

Ben Corry, Matthew Hoyles, Toby W. Allen, Michael Walker, Serdar Kuyucak, and Shin-Ho Chung

Reservoir Boundaries in Brownian Dynamics Simulations of Ion Channels
Biophys. J. 2002 82: 1975-1984. [Abstract] [Full Text] [PDF]  

Valery V. Malev, Ludmila V. Schagina, Philip A. Gurnev, Jon Y. Takemoto, Ekaterina M. Nestorovich, and Sergey M. Bezrukov

Syringomycin E Channel: A Lipidic Pore Stabilized by Lipopeptide?
Biophys. J. 2002 82: 1985-1994. [Abstract] [Full Text] [PDF]  

Huiping Tu, Tomoya Miyakawa, Zhengnan Wang, Lyuba Glouchankova, Masamitsu Iino, and Ilya Bezprozvanny

Functional Characterization of the Type 1 Inositol 1,4,5-Trisphosphate Receptor Coupling Domain SII(±) Splice Variants and the Opisthotonos Mutant Form
Biophys. J. 2002 82: 1995-2004. [Abstract] [Full Text] [PDF]  

MEMBRANES:

C. Lindsay Bashford, Glenn M. Alder, and Charles A. Pasternak

Fluctuation of Surface Charge in Membrane Pores
Biophys. J. 2002 82: 2032-2040. [Abstract] [Full Text] [PDF]  

Kaushik Nag, Jin-Si Pao, Robert R. Harbottle, Fred Possmayer, Nils O. Petersen, and Luis A. Bagatolli

Segregation of Saturated Chain Lipids in Pulmonary Surfactant Films and Bilayers
Biophys. J. 2002 82: 2041-2051. [Abstract] [Full Text] [PDF]  

Tian-xiang Xiang and Bradley D. Anderson

A Computer Simulation of Functional Group Contributions to Free Energy in Water and a DPPC Lipid Bilayer
Biophys. J. 2002 82: 2052-2066. [Abstract] [Full Text] [PDF]  

Li Li, Xiaoping Tang, K. Grant Taylor, Donald B. DuPré, and M. Cecilia Yappert

Conformational Characterization of Ceramides by Nuclear Magnetic Resonance Spectroscopy
Biophys. J. 2002 82: 2067-2080. [Abstract] [Full Text] [PDF]  

Jeffrey A. White and William M. Deen

Agarose-Dextran Gels as Synthetic Analogs of Glomerular Basement Membrane: Water Permeability
Biophys. J. 2002 82: 2081-2089. [Abstract] [Full Text] [PDF]  

Vladimir S. Malinin, Peter Frederik, and Barry R. Lentz

Osmotic and Curvature Stress Affect PEG-Induced Fusion of Lipid Vesicles but Not Mixing of Their Lipids
Biophys. J. 2002 82: 2090-2100. [Abstract] [Full Text] [PDF]  

Adina Lavi, Hana Weitman, Robert T. Holmes, Kevin M. Smith, and Benjamin Ehrenberg

The Depth of Porphyrin in a Membrane and the Membrane's Physical Properties Affect the Photosensitizing Efficiency
Biophys. J. 2002 82: 2101-2110. [Abstract] [Full Text] [PDF]  

MUSCLE AND CONTRACTILITY:

S. Xu, J. Gu, G. Melvin, and L. C. Yu

Structural Characterization of Weakly Attached Cross-Bridges in the A·M·ATP State in Permeabilized Rabbit Psoas Muscle
Biophys. J. 2002 82: 2111-2122. [Abstract] [Full Text] [PDF]  

Jin Gu, Sengen Xu, and Leepo C. Yu

A Model of Cross-Bridge Attachment to Actin in the A·M·ATP State Based on X-Ray Diffraction from Permeabilized Rabbit Psoas Muscle
Biophys. J. 2002 82: 2123-2133. [Abstract] [Full Text] [PDF]  

Josh E. Baker, Christine Brosseau, Peteranne B. Joel, and David M. Warshaw

The Biochemical Kinetics Underlying Actin Movement Generated by One and Many Skeletal Muscle Myosin Molecules
Biophys. J. 2002 82: 2134-2147. [Abstract] [Full Text] [PDF]  

PHOTOBIOPHYSICS:

Catherine Tetreau, Eugene Novikov, Martine Tourbez, and Daniel Lavalette

Kinetic Evidence for Three Photolyzable Taxonomic Conformational Substates in Oxymyoglobin
Biophys. J. 2002 82: 2148-2155. [Abstract] [Full Text] [PDF]  

Johann P. Klare, Georg Schmies, Igor Chizhov, Kazumi Shimono, Naoki Kamo, and Martin Engelhard

Probing the Proton Channel and the Retinal Binding Site of Natronobacterium pharaonis Sensory Rhodopsin II
Biophys. J. 2002 82: 2156-2164. [Abstract] [Full Text] [PDF]  

PROTEINS:

Francesco Spinozzi, Domenico Gazzillo, Achille Giacometti, Paolo Mariani, and Flavio Carsughi

Interaction of Proteins in Solution from Small-Angle Scattering: A Perturbative Approach
Biophys. J. 2002 82: 2165-2175. [Abstract] [Full Text] [PDF]  

Gianluigi Veglia, Ana Carolina Zeri, Che Ma, and Stanley J. Opella

Deuterium/Hydrogen Exchange Factors Measured by Solution Nuclear Magnetic Resonance Spectroscopy as Indicators of the Structure and Topology of Membrane Proteins
Biophys. J. 2002 82: 2176-2183. [Abstract] [Full Text] [PDF]  

SUPRAMOLECULAR ASSEMBLIES:

L. Kreplak, A. Franbourg, F. Briki, F. Leroy, D. Dallé, and J. Doucet

A New Deformation Model of Hard -Keratin Fibers at the Nanometer Scale: Implications for Hard -Keratin Intermediate Filament Mechanical Properties
Biophys. J. 2002 82: 2265-2274. [Abstract] [Full Text] [PDF]  

SPECTROSCOPY, IMAGING, OTHER TECHNIQUES:

Sofia Georgakopoulou, Raoul N. Frese, Evelyn Johnson, Corline Koolhaas, Richard J. Cogdell, Rienk van Grondelle, and Gert van der Zwan

Absorption and CD Spectroscopy and Modeling of Various LH2 Complexes from Purple Bacteria
Biophys. J. 2002 82: 2184-2197. [Abstract] [Full Text] [PDF]  

Blaine C. Butler, Ross H. Hanchett, Helena Rafailov, and Gina MacDonald

Investigating Structural Changes Induced By Nucleotide Binding to RecA Using Difference FTIR
Biophys. J. 2002 82: 2198-2210. [Abstract] [Full Text] [PDF]  

Hayden Huang, Chen Y. Dong, Hyuk-Sang Kwon, Jason D. Sutin, Roger D. Kamm, and Peter T. C. So

Three-Dimensional Cellular Deformation Analysis with a Two-Photon Magnetic Manipulator Workstation
Biophys. J. 2002 82: 2211-2223. [Abstract] [Full Text] [PDF]  

Guenther Leitz, Erik Fällman, Simon Tuck, and Ove Axner

Stress Response in Caenorhabditis elegans Caused by Optical Tweezers: Wavelength, Power, and Time Dependence
Biophys. J. 2002 82: 2224-2231. [Abstract] [Full Text] [PDF]  

Susana A. Sanchez, Luis A. Bagatolli, Enrico Gratton, and Theodore L. Hazlett

A Two-Photon View of an Enzyme at Work: Crotalus atrox Venom PLA₂ Interaction with Single-Lipid and Mixed-Lipid Giant Unilamellar Vesicles
Biophys. J. 2002 82: 2232-2243. [Abstract] [Full Text] [PDF]  

Peter J. Steinbach, Roxana Ionescu, and C. Robert Matthews

Analysis of Kinetics Using a Hybrid Maximum-Entropy/Nonlinear-Least-Squares Method: Application to Protein Folding
Biophys. J. 2002 82: 2244-2255. [Abstract] [Full Text] [PDF]  

Adam Wax, Changhuei Yang, Vadim Backman, Kamran Badizadegan, Charles W. Boone, Ramachandra R. Dasari, and Michael S. Feld

Cellular Organization and Substructure Measured Using Angle-Resolved Low-Coherence Interferometry
Biophys. J. 2002 82: 2256-2264. [Abstract] [Full Text] [PDF]  

CELL BIOPHYSICS:

George Georgiou, Sukhvinder S. Bahra, Alan R. Mackie, Caroline A. Wolfe, Paul O'Shea, Shab Ladha, Nelson Fernandez, and Richard J. Cherry

Measurement of the Lateral Diffusion of Human MHC Class I Molecules on HeLa Cells by Fluorescence Recovery after Photobleaching Using a Phycoerythrin Probe
Biophys. J. 2002 82: 1828-1834. [Abstract] [Full Text] [PDF]  

Eric Y. H. Park, McRae J. Smith, Emily S. Stropp, Karen R. Snapp, Jeffrey A. DiVietro, William F. Walker, David W. Schmidtke, Scott L. Diamond, and Michael B. Lawrence

Comparison of PSGL-1 Microbead and Neutrophil Rolling: Microvillus Elongation Stabilizes P-Selectin Bond Clusters
Biophys. J. 2002 82: 1835-1847. [Abstract] [Full Text] [PDF]  

Ella Zimmerman, Benjamin Geiger, and Lia Addadi

Initial Stages of Cell-Matrix Adhesion Can Be Mediated and Modulated by Cell-Surface Hyaluronan
Biophys. J. 2002 82: 1848-1857. [Abstract] [Full Text] [PDF]  

Daniel Irimia and Jens O. M. Karlsson

Kinetics and Mechanism of Intercellular Ice Propagation in a Micropatterned Tissue Construct
Biophys. J. 2002 82: 1858-1868. [Abstract] [Full Text] [PDF]  

M. J. Tyska and M. S. Mooseker

MYO1A (Brush Border Myosin I) Dynamics in the Brush Border of LLC-PK1-CL4 Cells
Biophys. J. 2002 82: 1869-1883. [Abstract] [Full Text] [PDF]  

BIOENERGETICS:

Melinda Lakatos, Géza I. Groma, Constanta Ganea, Janos K. Lanyi, and György Váró

Characterization of the Azide-Dependent Bacteriorhodopsin-Like Photocycle of Salinarum Halorhodopsin
Biophys. J. 2002 82: 1687-1695. [Abstract] [Full Text] [PDF]  

ELECTROPHYSIOLOGY:

Fusao Kawai

Ca²⁺-Activated K⁺ Currents Regulate Odor Adaptation by Modulating Spike Encoding of Olfactory Receptor Cells
Biophys. J. 2002 82: 2005-2015. [Abstract] [Full Text] [PDF]  

Derek L. Beahm and James E. Hall

Hemichannel and Junctional Properties of Connexin 50
Biophys. J. 2002 82: 2016-2031. [Abstract] [Full Text] [PDF]  

LETTERS TO THE EDITOR:

Yu-Kai The, Mirko Wagner, and Jens Timmer

Method-Independent Effect in Testing for Detailed Balance in Ion Channel Gating
Biophys. J. 2002 82: 2275-2276. [Full Text] [PDF]  

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