BIOPHYSICAL LETTERS:

David A. Sturman, Dinara Shakiryanova, Randall S. Hewes, David L. Deitcher, and Edwin S. Levitan

Nearly Neutral Secretory Vesicles in Drosophila Nerve Terminals
Biophys. J. 2006 90: L45-L47; Published ahead of print on January 20, 2006 as doi:10.1529/biophysj.106.080978. [Abstract] [Full Text] [PDF] [Supplemental]  

BIOPHYSICAL THEORY AND MODELING:

Jennifer M. Johnston, Gabriel A. Cook, John M. Tomich, and Mark S. P. Sansom

Conformation and Environment of Channel-Forming Peptides: A Simulation Study
Biophys. J. 2006 90: 1855-1864; Published ahead of print on December 30, 2005 as doi:10.1529/biophysj.105.069625. [Abstract] [Full Text] [PDF]  

Qing Zhang and Tamar Schlick

Stereochemistry and Position-Dependent Effects of Carcinogens on TATA/TBP Binding
Biophys. J. 2006 90: 1865-1877; Published ahead of print on December 30, 2005 as doi:10.1529/biophysj.105.074344. [Abstract] [Full Text] [PDF] [Supplemental]  

Joël Beaudouin, Felipe Mora-Bermúdez, Thorsten Klee, Nathalie Daigle, and Jan Ellenberg

Dissecting the Contribution of Diffusion and Interactions to the Mobility of Nuclear Proteins
Biophys. J. 2006 90: 1878-1894; Published ahead of print on December 30, 2005 as doi:10.1529/biophysj.105.071241. [Abstract] [Full Text] [PDF] [Supplemental]  

Fei Liu, Huan Tong, and Zhong-can Ou-Yang

Force Unfolding Single RNAs
Biophys. J. 2006 90: 1895-1902; Published ahead of print on December 30, 2005 as doi:10.1529/biophysj.105.070540. [Abstract] [Full Text] [PDF]  

Yongli Zhang, Abbye E. McEwen, Donald M. Crothers, and Stephen D. Levene

Statistical-Mechanical Theory of DNA Looping
Biophys. J. 2006 90: 1903-1912; Published ahead of print on December 16, 2005 as doi:10.1529/biophysj.105.070490. [Abstract] [Full Text] [PDF]  

Alexander Spaar, Christian Dammer, Razif R. Gabdoulline, Rebecca C. Wade, and Volkhard Helms

Diffusional Encounter of Barnase and Barstar
Biophys. J. 2006 90: 1913-1924; Published ahead of print on December 16, 2005 as doi:10.1529/biophysj.105.075507. [Abstract] [Full Text] [PDF]  

Kenji Morita, Kunichika Tsumoto, and Kazuyuki Aihara

Bidirectional Modulation of Neuronal Responses by Depolarizing GABAergic Inputs
Biophys. J. 2006 90: 1925-1938; Published ahead of print on December 30, 2005 as doi:10.1529/biophysj.105.063164. [Abstract] [Full Text] [PDF]  

Roya Zandi, Paul van der Schoot, David Reguera, Willem Kegel, and Howard Reiss

Classical Nucleation Theory of Virus Capsids
Biophys. J. 2006 90: 1939-1948; Published ahead of print on December 30, 2005 as doi:10.1529/biophysj.105.072975. [Abstract] [Full Text] [PDF]  

Vincent K. Shen, Jason K. Cheung, Jeffrey R. Errington, and Thomas M. Truskett

Coarse-Grained Strategy for Modeling Protein Stability in Concentrated Solutions. II: Phase Behavior
Biophys. J. 2006 90: 1949-1960; Published ahead of print on December 30, 2005 as doi:10.1529/biophysj.105.076497. [Abstract] [Full Text] [PDF]  

Xiao Wang, Nan Hao, Henrik G. Dohlman, and Timothy C. Elston

Bistability, Stochasticity, and Oscillations in the Mitogen-Activated Protein Kinase Cascade
Biophys. J. 2006 90: 1961-1978; Published ahead of print on December 16, 2005 as doi:10.1529/biophysj.105.073874. [Abstract] [Full Text] [PDF]  

CHANNELS, RECEPTORS, AND ELECTRICAL SIGNALING:

A. J. Thompson, P.-L. Chau, S. L. Chan, and S. C. R. Lummis

Unbinding Pathways of an Agonist and an Antagonist from the 5-HT₃ Receptor
Biophys. J. 2006 90: 1979-1991; Published ahead of print on December 30, 2005 as doi:10.1529/biophysj.105.069385. [Abstract] [Full Text] [PDF]  

Anna Kloda, Alexandre Ghazi, and Boris Martinac

C-Terminal Charged Cluster of MscL, RKKEE, Functions as a pH Sensor
Biophys. J. 2006 90: 1992-1998; Published ahead of print on December 30, 2005 as doi:10.1529/biophysj.105.075481. [Abstract] [Full Text] [PDF]  

Xiaoying Koh, Bhuvan Srinivasan, Hwee Seong Ching, and Andre Levchenko

A 3D Monte Carlo Analysis of the Role of Dyadic Space Geometry in Spark Generation
Biophys. J. 2006 90: 1999-2014; Published ahead of print on December 30, 2005 as doi:10.1529/biophysj.105.065466. [Abstract] [Full Text] [PDF] [Supplemental]  

Jaya Pal Gangopadhyay and Noriaki Ikemoto

Role of the Met³⁵³⁴–Ala⁴²⁷¹ Region of the Ryanodine Receptor in the Regulation of Ca²⁺ Release Induced by Calmodulin Binding Domain Peptide
Biophys. J. 2006 90: 2015-2026; Published ahead of print on December 30, 2005 as doi:10.1529/biophysj.105.074328. [Abstract] [Full Text] [PDF]  

Ronghua ZhuGe, Valerie DeCrescenzo, Vincenzo Sorrentino, F. Anthony Lai, Richard A. Tuft, Lawrence M. Lifshitz, Jose R. Lemos, Corey Smith, Kevin E. Fogarty, and John V. Walsh, Jr.

Syntillas Release Ca²⁺ at a Site Different from the Microdomain Where Exocytosis Occurs in Mouse Chromaffin Cells
Biophys. J. 2006 90: 2027-2037; Published ahead of print on December 30, 2005 as doi:10.1529/biophysj.105.071654. [Abstract] [Full Text] [PDF]  

MEMBRANES:

Z. Khattari, G. Brotons, M. Akkawi, E. Arbely, I. T. Arkin, and T. Salditt

SARS Coronavirus E Protein in Phospholipid Bilayers: An X-Ray Study
Biophys. J. 2006 90: 2038-2050; Published ahead of print on December 16, 2005 as doi:10.1529/biophysj.105.072892. [Abstract] [Full Text] [PDF]  

Ivan V. Polozov and Klaus Gawrisch

Characterization of the Liquid-Ordered State by Proton MAS NMR
Biophys. J. 2006 90: 2051-2061; Published ahead of print on December 30, 2005 as doi:10.1529/biophysj.105.070441. [Abstract] [Full Text] [PDF]  

Xiaocheng Chen, Demet Araç, Tzu-Ming Wang, Christopher J. Gilpin, Joshua Zimmerberg, and Josep Rizo

SNARE-Mediated Lipid Mixing Depends on the Physical State of the Vesicles
Biophys. J. 2006 90: 2062-2074; Published ahead of print on December 16, 2005 as doi:10.1529/biophysj.105.071415. [Abstract] [Full Text] [PDF]  

Kislon Voïtchovsky, Sonia Antoranz Contera, Miya Kamihira, Anthony Watts, and J. F. Ryan

Differential Stiffness and Lipid Mobility in the Leaflets of Purple Membranes
Biophys. J. 2006 90: 2075-2085; Published ahead of print on December 30, 2005 as doi:10.1529/biophysj.105.072405. [Abstract] [Full Text] [PDF]  

Andrey Filippov, Greger Orädd, and Göran Lindblom

Sphingomyelin Structure Influences the Lateral Diffusion and Raft Formation in Lipid Bilayers
Biophys. J. 2006 90: 2086-2092; Published ahead of print on December 30, 2005 as doi:10.1529/biophysj.105.075150. [Abstract] [Full Text] [PDF]  

PHOTOBIOPHYSICS:

Honglian Guo, Chunhua Xu, Chunxiang Liu, E. Qu, Ming Yuan, Zhaolin Li, Bingying Cheng, and Daozhong Zhang

Mechanism and Dynamics of Breakage of Fluorescent Microtubules
Biophys. J. 2006 90: 2093-2098; Published ahead of print on December 30, 2005 as doi:10.1529/biophysj.105.071209. [Abstract] [Full Text] [PDF]  

Markus Löweneck, Alexander G. Milbradt, Christopher Root, Helmut Satzger, Wolfgang Zinth, Luis Moroder, and Christian Renner

A Conformational Two-State Peptide Model System Containing an Ultrafast but Soft Light Switch
Biophys. J. 2006 90: 2099-2108; Published ahead of print on December 30, 2005 as doi:10.1529/biophysj.105.067363. [Abstract] [Full Text] [PDF] [Supplemental]  

PROTEINS:

Nuno M. F. S. A. Cerqueira, Pedro Alexandrino Fernandes, Leif A. Eriksson, and Maria João Ramos

Dehydration of Ribonucleotides Catalyzed by Ribonucleotide Reductase: The Role of the Enzyme
Biophys. J. 2006 90: 2109-2119; Published ahead of print on December 16, 2005 as doi:10.1529/biophysj.104.054627. [Abstract] [Full Text] [PDF] [Supplemental]  

Sarah Batey, Kathryn A. Scott, and Jane Clarke

Complex Folding Kinetics of a Multidomain Protein
Biophys. J. 2006 90: 2120-2130; Published ahead of print on December 30, 2005 as doi:10.1529/biophysj.105.072710. [Abstract] [Full Text] [PDF]  

Ole Farver, Ernst Grell, Bernd Ludwig, Hartmut Michel, and Israel Pecht

Rates and Equilibrium of Cu_A to Heme a Electron Transfer in Paracoccus denitrificans Cytochrome c Oxidase
Biophys. J. 2006 90: 2131-2137; Published ahead of print on December 30, 2005 as doi:10.1529/biophysj.105.075440. [Abstract] [Full Text] [PDF]  

SUPRAMOLECULAR ASSEMBLIES:

Lalida P. Shank, James R. Broughman, Wade Takeguchi, Gabriel Cook, Ashley S. Robbins, Lindsey Hahn, Gary Radke, Takeo Iwamoto, Bruce D. Schultz, and John M. Tomich

Redesigning Channel-Forming Peptides: Amino Acid Substitutions that Enhance Rates of Supramolecular Self-Assembly and Raise Ion Transport Activity
Biophys. J. 2006 90: 2138-2150; Published ahead of print on December 30, 2005 as doi:10.1529/biophysj.105.070078. [Abstract] [Full Text] [PDF]  

SPECTROSCOPY, IMAGING, OTHER TECHNIQUES:

F. v. Wegner, M. Both, and R. H. A. Fink

Automated Detection of Elementary Calcium Release Events Using the À Trous Wavelet Transform
Biophys. J. 2006 90: 2151-2163; Published ahead of print on December 30, 2005 as doi:10.1529/biophysj.105.069930. [Abstract] [Full Text] [PDF]  

Keiichi Kameyama and Allen P. Minton

Rapid Quantitative Characterization of Protein Interactions by Composition Gradient Static Light Scattering
Biophys. J. 2006 90: 2164-2169; Published ahead of print on December 30, 2005 as doi:10.1529/biophysj.105.074310. [Abstract] [Full Text] [PDF]  

James E. Shaw, Raquel F. Epand, Richard M. Epand, Zaiguo Li, Robert Bittman, and Christopher M. Yip

Correlated Fluorescence-Atomic Force Microscopy of Membrane Domains: Structure of Fluorescence Probes Determines Lipid Localization
Biophys. J. 2006 90: 2170-2178; Published ahead of print on December 16, 2005 as doi:10.1529/biophysj.105.073510. [Abstract] [Full Text] [PDF]  

Kaupo Palo, Ülo Mets, Vello Loorits, and Peet Kask

Calculation of Photon-Count Number Distributions via Master Equations
Biophys. J. 2006 90: 2179-2191; Published ahead of print on December 30, 2005 as doi:10.1529/biophysj.105.066084. [Abstract] [Full Text] [PDF]  

Anna Tourovskaia, T. Fettah Kosar, and Albert Folch

Local Induction of Acetylcholine Receptor Clustering in Myotube Cultures Using Microfluidic Application of Agrin
Biophys. J. 2006 90: 2192-2198; Published ahead of print on December 30, 2005 as doi:10.1529/biophysj.105.074864. [Abstract] [Full Text] [PDF] [Supplemental]  

CELL BIOPHYSICS:

Mark F. Coughlin, Marina Puig-de-Morales, Predrag Bursac, Matthew Mellema, Emil Millet, and Jeffrey J. Fredberg

Filamin-A and Rheological Properties of Cultured Melanoma Cells
Biophys. J. 2006 90: 2199-2205; Published ahead of print on December 30, 2005 as doi:10.1529/biophysj.105.061267. [Abstract] [Full Text] [PDF]  

Elnaz Alipour-Assiabi, Guanglai Li, Thomas R. Powers, and Jay X. Tang

Fluctuation Analysis of Caulobacter crescentus Adhesion
Biophys. J. 2006 90: 2206-2212; Published ahead of print on December 16, 2005 as doi:10.1529/biophysj.105.064592. [Abstract] [Full Text] [PDF]  

Wei-hui Guo, Margo T. Frey, Nancy A. Burnham, and Yu-li Wang

Substrate Rigidity Regulates the Formation and Maintenance of Tissues
Biophys. J. 2006 90: 2213-2220; Published ahead of print on December 30, 2005 as doi:10.1529/biophysj.105.070144. [Abstract] [Full Text] [PDF] [Supplemental]  

Zhihua Xiao, Harry L. Goldsmith, Fiona A. McIntosh, Harish Shankaran, and Sriram Neelamegham

Biomechanics of P-Selectin PSGL-1 Bonds: Shear Threshold and Integrin-Independent Cell Adhesion
Biophys. J. 2006 90: 2221-2234; Published ahead of print on December 30, 2005 as doi:10.1529/biophysj.105.065789. [Abstract] [Full Text] [PDF] [Supplemental]  

ELECTROPHYSIOLOGY:

Guiscard Seebohm, Nathalie Strutz-Seebohm, Oana N. Ureche, Ravshan Baltaev, Angelika Lampert, Ganna Kornichuk, Kaichiro Kamiya, Thomas V. Wuttke, Holger Lerche, Michael C. Sanguinetti, and Florian Lang

Differential Roles of S6 Domain Hinges in the Gating of KCNQ Potassium Channels
Biophys. J. 2006 90: 2235-2244; Published ahead of print on December 2, 2005 as doi:10.1529/biophysj.105.067165. [Abstract] [Full Text] [PDF]  

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