BIOPHYSICAL LETTERS:

Nicholas Dimakis and Grant Bunker

Ab Initio Self-Consistent X-Ray Absorption Fine Structure Analysis for Metalloproteins
Biophys. J. 2006 91: L87-L89; Published ahead of print on September 29, 2006 as doi:10.1529/biophysj.106.090837. [Abstract] [Full Text] [PDF] [Supplement]  

J. Alfredo Freites, Douglas J. Tobias, and Stephen H. White

A Voltage-Sensor Water Pore
Biophys. J. 2006 91: L90-L92; Published ahead of print on September 29, 2006 as doi:10.1529/biophysj.106.096065. [Abstract] [Full Text] [PDF] [Supplement]  

Janet S. Anderson, David M. LeMaster, and Griselda Hernández

Electrostatic Potential Energy within a Protein Monitored by Metal Charge-Dependent Hydrogen Exchange
Biophys. J. 2006 91: L93-L95; Published ahead of print on September 29, 2006 as doi:10.1529/biophysj.106.094219. [Abstract] [Full Text] [PDF]  

Martijn E. van Raaij, Ine M. J. Segers-Nolten, and Vinod Subramaniam

Quantitative Morphological Analysis Reveals Ultrastructural Diversity of Amyloid Fibrils from -Synuclein Mutants
Biophys. J. 2006 91: L96-L98; Published ahead of print on September 22, 2006 as doi:10.1529/biophysj.106.090449. [Abstract] [Full Text] [PDF] [Supplement]  

NEW AND NOTABLE:

Michael Edidin

Switching Sides: The Actin/Membrane Lipid Connection
Biophys. J. 2006 91: 3963(11) [Full Text] [PDF]  

BIOPHYSICAL THEORY AND MODELING:

Fabien Cailliez and Richard Lavery

Dynamics and Stability of E-Cadherin Dimers
Biophys. J. 2006 91: 3964-3971; Published ahead of print on September 15, 2006 as doi:10.1529/biophysj.106.087213. [Abstract] [Full Text] [PDF]  

Ying Yin, Morten Ø Jensen, Emad Tajkhorshid, and Klaus Schulten

Sugar Binding and Protein Conformational Changes in Lactose Permease
Biophys. J. 2006 91: 3972-3985; Published ahead of print on September 8, 2006 as doi:10.1529/biophysj.106.085993. [Abstract] [Full Text] [PDF] [Supplement]  

Danying Shao, Wen Zheng, Wenjun Qiu, Qi Ouyang, and Chao Tang

Dynamic Studies of Scaffold-Dependent Mating Pathway in Yeast
Biophys. J. 2006 91: 3986-4001; Published ahead of print on September 15, 2006 as doi:10.1529/biophysj.106.081661. [Abstract] [Full Text] [PDF] [Supplement]  

Ganhui Lan and Sean X. Sun

Flexible Light-Chain and Helical Structure of F-Actin Explain the Movement and Step Size of Myosin-VI
Biophys. J. 2006 91: 4002-4013; Published ahead of print on September 8, 2006 as doi:10.1529/biophysj.106.089888. [Abstract] [Full Text] [PDF]  

Shi Zhong, Jeremy M. Moix, Stephen Quirk, and Rigoberto Hernandez

Dihedral-Angle Information Entropy as a Gauge of Secondary Structure Propensity
Biophys. J. 2006 91: 4014-4023; Published ahead of print on September 15, 2006 as doi:10.1529/biophysj.106.089243. [Abstract] [Full Text] [PDF] [Supplement]  

Heather J. Rose, Sheila Dargan, Jianwei Shuai, and Ian Parker

‘Trigger’ Events Precede Calcium Puffs in Xenopus Oocytes
Biophys. J. 2006 91: 4024-4032; Published ahead of print on September 15, 2006 as doi:10.1529/biophysj.106.088872. [Abstract] [Full Text] [PDF]  

Jianwei Shuai, Heather J. Rose, and Ian Parker

The Number and Spatial Distribution of IP₃ Receptors Underlying Calcium Puffs in Xenopus Oocytes
Biophys. J. 2006 91: 4033-4044; Published ahead of print on September 15, 2006 as doi:10.1529/biophysj.106.088880. [Abstract] [Full Text] [PDF]  

Yajun Zhou and Xiaowei Zhuang

Robust Reconstruction of the Rate Constant Distribution Using the Phase Function Method
Biophys. J. 2006 91: 4045-4053; Published ahead of print on September 15, 2006 as doi:10.1529/biophysj.106.090688. [Abstract] [Full Text] [PDF] [Supplement]  

CHANNELS, RECEPTORS, AND ELECTRICAL SIGNALING:

Junko Shibayama, Cristina Gutiérrez, Daniel González, Fabien Kieken, Akiko Seki, Jesus Requena Carrión, Paul L. Sorgen, Steven M. Taffet, Luis C. Barrio, and Mario Delmar

Effect of Charge Substitutions at Residue His-142 on Voltage Gating of Connexin43 Channels
Biophys. J. 2006 91: 4054-4063; Published ahead of print on September 8, 2006 as doi:10.1529/biophysj.106.085787. [Abstract] [Full Text] [PDF]  

MEMBRANES:

Allen P. Liu and Daniel A. Fletcher

Actin Polymerization Serves as a Membrane Domain Switch in Model Lipid Bilayers
Biophys. J. 2006 91: 4064-4070; Published ahead of print on September 8, 2006 as doi:10.1529/biophysj.106.090852. [Abstract] [Full Text] [PDF]  

Martin J. O. Widenbrant, Jayakumar Rajadas, Christopher Sutardja, and Gerald G. Fuller

Lipid-Induced ß-Amyloid Peptide Assemblage Fragmentation
Biophys. J. 2006 91: 4071-4080. [Abstract] [Full Text] [PDF]  

Amalie L. Frischknecht and Laura J. Douglas Frink

Alcohols Reduce Lateral Membrane Pressures: Predictions from Molecular Theory
Biophys. J. 2006 91: 4081-4090; Published ahead of print on September 15, 2006 as doi:10.1529/biophysj.106.091918. [Abstract] [Full Text] [PDF]  

Heather A. Wilson-Ashworth, Quinn Bahm, Joshua Erickson, Aaron Shinkle, Mai P. Vu, Dixon Woodbury, and John D. Bell

Differential Detection of Phospholipid Fluidity, Order, and Spacing by Fluorescence Spectroscopy of Bis-pyrene, Prodan, Nystatin, and Merocyanine 540
Biophys. J. 2006 91: 4091-4101; Published ahead of print on September 15, 2006 as doi:10.1529/biophysj.106.090860. [Abstract] [Full Text] [PDF]  

MUSCLE AND CONTRACTILITY:

Kenneth S. Campbell

Filament Compliance Effects Can Explain Tension Overshoots during Force Development
Biophys. J. 2006 91: 4102-4109; Published ahead of print on September 1, 2006 as doi:10.1529/biophysj.106.087312. [Abstract] [Full Text] [PDF]  

Naoto Yagi, Hiroyuki Iwamoto, and Katsuaki Inoue

Structural Changes of Cross-Bridges on Transition from Isometric to Shortening State in Frog Skeletal Muscle
Biophys. J. 2006 91: 4110-4120; Published ahead of print on September 15, 2006 as doi:10.1529/biophysj.106.087502. [Abstract] [Full Text] [PDF]  

NUCLEIC ACIDS:

Jory Z. Ruscio and Alexey Onufriev

A Computational Study of Nucleosomal DNA Flexibility
Biophys. J. 2006 91: 4121-4132; Published ahead of print on August 4, 2006 as doi:10.1529/biophysj.106.082099. [Abstract] [Full Text] [PDF]  

M. T. Horne, D. J. Fish, and A. S. Benight

Statistical Thermodynamics and Kinetics of DNA Multiplex Hybridization Reactions
Biophys. J. 2006 91: 4133-4153; Published ahead of print on September 8, 2006 as doi:10.1529/biophysj.106.090662. [Abstract] [Full Text] [PDF]  

Gregory J. Gemmen, Rachel Millin, and Douglas E. Smith

Dynamics of Single DNA Looping and Cleavage by Sau3AI and Effect of Tension Applied to the DNA
Biophys. J. 2006 91: 4154-4165; Published ahead of print on September 8, 2006 as doi:10.1529/biophysj.106.088518. [Abstract] [Full Text] [PDF]  

Bryant S. Fujimoto, Gregory P. Brewood, and J. Michael Schurr

Torsional Rigidities of Weakly Strained DNAs
Biophys. J. 2006 91: 4166-4179; Published ahead of print on September 8, 2006 as doi:10.1529/biophysj.106.087593. [Abstract] [Full Text] [PDF]  

PROTEINS:

Shashi Bhushan Pandit, Yang Zhang, and Jeffrey Skolnick

TASSER-Lite: An Automated Tool for Protein Comparative Modeling
Biophys. J. 2006 91: 4180-4190; Published ahead of print on September 8, 2006 as doi:10.1529/biophysj.106.084293. [Abstract] [Full Text] [PDF]  

Andras D. Kaposi, Jane M. Vanderkooi, and Solomon S. Stavrov

Infrared Absorption Study of the Heme Pocket Dynamics of Carbonmonoxyheme Proteins
Biophys. J. 2006 91: 4191-4200; Published ahead of print on September 15, 2006 as doi:10.1529/biophysj.105.068254. [Abstract] [Full Text] [PDF]  

Minfen Li, Jingxian Liu, Xiaoyuan Ran, Miaoqing Fang, Jiahai Shi, Haina Qin, June-Mui Goh, and Jianxing Song

Resurrecting Abandoned Proteins with Pure Water: CD and NMR Studies of Protein Fragments Solubilized in Salt-Free Water
Biophys. J. 2006 91: 4201-4209; Published ahead of print on September 15, 2006 as doi:10.1529/biophysj.106.093187. [Abstract] [Full Text] [PDF]  

Karin Nienhaus, Fabiana Renzi, Beatrice Vallone, Jörg Wiedenmann, and G. Ulrich Nienhaus

Chromophore-Protein Interactions in the Anthozoan Green Fluorescent Protein asFP499
Biophys. J. 2006 91: 4210-4220; Published ahead of print on September 15, 2006 as doi:10.1529/biophysj.106.087411. [Abstract] [Full Text] [PDF]  

SUPRAMOLECULAR ASSEMBLIES:

Shaohua Xu and Jianqing J. Yu

Beneath the Minerals, a Layer of Round Lipid Particles Was Identified to Mediate Collagen Calcification in Compact Bone Formation
Biophys. J. 2006 91: 4221-4229; Published ahead of print on September 15, 2006 as doi:10.1529/biophysj.105.075804. [Abstract] [Full Text] [PDF]  

Xiaoying Lu, Larry S. Tobacman, and Masataka Kawai

Temperature-Dependence of Isometric Tension and Cross-Bridge Kinetics of Cardiac Muscle Fibers Reconstituted with a Tropomyosin Internal Deletion Mutant
Biophys. J. 2006 91: 4230-4240; Published ahead of print on September 15, 2006 as doi:10.1529/biophysj.106.084608. [Abstract] [Full Text] [PDF]  

SPECTROSCOPY, IMAGING, OTHER TECHNIQUES:

Daniel R. Sisan, Richard Arevalo, Catherine Graves, Ryan McAllister, and Jeffrey S. Urbach

Spatially Resolved Fluorescence Correlation Spectroscopy Using a Spinning Disk Confocal Microscope
Biophys. J. 2006 91: 4241-4252; Published ahead of print on September 1, 2006 as doi:10.1529/biophysj.106.084251. [Abstract] [Full Text] [PDF]  

John Peter Rickgauer, Derek N. Fuller, and Douglas E. Smith

DNA as a Metrology Standard for Length and Force Measurements with Optical Tweezers
Biophys. J. 2006 91: 4253-4257; Published ahead of print on September 8, 2006 as doi:10.1529/biophysj.106.089524. [Abstract] [Full Text] [PDF]  

Samuel T. Hess, Thanu P. K. Girirajan, and Michael D. Mason

Ultra-High Resolution Imaging by Fluorescence Photoactivation Localization Microscopy
Biophys. J. 2006 91: 4258-4272; Published ahead of print on September 15, 2006 as doi:10.1529/biophysj.106.091116. [Abstract] [Full Text] [PDF]  

Lindsey N. Hillesheim, Yan Chen, and Joachim D. Müller

Dual-Color Photon Counting Histogram Analysis of mRFP1 and EGFP in Living Cells
Biophys. J. 2006 91: 4273-4284; Published ahead of print on September 15, 2006 as doi:10.1529/biophysj.106.085845. [Abstract] [Full Text] [PDF]  

CELL BIOPHYSICS:

Claus-Dieter Ohl, Manish Arora, Roy Ikink, Nico de Jong, Michel Versluis, Michael Delius, and Detlef Lohse

Sonoporation from Jetting Cavitation Bubbles
Biophys. J. 2006 91: 4285-4295; Published ahead of print on September 1, 2006 as doi:10.1529/biophysj.105.075366. [Abstract] [Full Text] [PDF]  

Daphne Weihs, Thomas G. Mason, and Michael A. Teitell

Bio-Microrheology: A Frontier in Microrheology
Biophys. J. 2006 91: 4296-4305; Published ahead of print on September 8, 2006 as doi:10.1529/biophysj.106.081109. [Abstract] [Full Text] [PDF]  

Sergey N. Arkhipov and Ivan V. Maly

Quantitative Analysis of the Role of Receptor Recycling in T Cell Polarization
Biophys. J. 2006 91: 4306-4316; Published ahead of print on September 8, 2006 as doi:10.1529/biophysj.106.083204. [Abstract] [Full Text] [PDF]  

Miguel Antonio Aon, Sonia Cortassa, and Brian O'Rourke

The Fundamental Organization of Cardiac Mitochondria as a Network of Coupled Oscillators
Biophys. J. 2006 91: 4317-4327; Published ahead of print on September 15, 2006 as doi:10.1529/biophysj.106.087817. [Abstract] [Full Text] [PDF] [Supplement]  

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