BIOPHYSICAL LETTERS:

Srinagesh V. Koushik, Huanmian Chen, Christopher Thaler, Henry L. Puhl, III, and Steven S. Vogel

Cerulean, Venus, and Venus_Y67C FRET Reference Standards
Biophys. J. 2006 91: L99-L101; Published ahead of print on October 13, 2006 as doi:10.1529/biophysj.106.096206. [Abstract] [Full Text] [PDF] [Supplement]  

EDITORIAL:

Dianne McGavin

Edward Egelman Named Incoming Biophysical Journal Editor-in-Chief
Biophys. J. 2006 91 [Full Text] [PDF]  

BIOPHYSICAL THEORY AND MODELING:

Malkaram S. Achary, Aramati B. M. Reddy, Subhabrata Chakrabarti, Shirly G. Panicker, Anil K. Mandal, Niyaz Ahmed, Dorairajan Balasubramanian, Seyed E. Hasnain, and Hampapathalu A. Nagarajaram

Disease-Causing Mutations in Proteins: Structural Analysis of the CYP1b1 Mutations Causing Primary Congenital Glaucoma in Humans
Biophys. J. 2006 91: 4329-4339; Published ahead of print on September 8, 2006 as doi:10.1529/biophysj.106.085498. [Abstract] [Full Text] [PDF] [Supplement]  

Chrystel Faure, Frédéric Nallet, Didier Roux, Scott T. Milner, Fabienne Gauffre, David Olea, and Olivier Lambert

Modeling Leakage Kinetics from Multilamellar Vesicles for Membrane Permeability Determination: Application to Glucose
Biophys. J. 2006 91: 4340-4349; Published ahead of print on September 22, 2006 as doi:10.1529/biophysj.106.088401. [Abstract] [Full Text] [PDF]  

Jeroen S. van Zon, Marco J. Morelli, Sorin Tanase-Nicola, and Pieter Rein ten Wolde

Diffusion of Transcription Factors Can Drastically Enhance the Noise in Gene Expression
Biophys. J. 2006 91: 4350-4367; Published ahead of print on September 29, 2006 as doi:10.1529/biophysj.106.086157. [Abstract] [Full Text] [PDF]  

Pontus Melke, Henrik Jönsson, Evangelia Pardali, Peter ten Dijke, and Carsten Peterson

A Rate Equation Approach to Elucidate the Kinetics and Robustness of the TGF-ß Pathway
Biophys. J. 2006 91: 4368-4380; Published ahead of print on September 29, 2006 as doi:10.1529/biophysj.105.080408. [Abstract] [Full Text] [PDF] [Supplement]  

CHANNELS, RECEPTORS, AND ELECTRICAL SIGNALING:

J. B. Saenen, A. J. Labro, A. Raes, and D. J. Snyders

Modulation of HERG Gating by a Charge Cluster in the N-Terminal Proximal Domain
Biophys. J. 2006 91: 4381-4391; Published ahead of print on September 22, 2006 as doi:10.1529/biophysj.106.087247. [Abstract] [Full Text] [PDF] [Supplement]  

Henk Miedema, Maarten Vrouenraets, Jenny Wierenga, Dirk Gillespie, Bob Eisenberg, Wim Meijberg, and Wolfgang Nonner

Ca²⁺ Selectivity of a Chemically Modified OmpF with Reduced Pore Volume
Biophys. J. 2006 91: 4392-4400; Published ahead of print on September 22, 2006 as doi:10.1529/biophysj.106.087114. [Abstract] [Full Text] [PDF]  

Thomas P. Nygaard, Carme Rovira, Günther H. Peters, and Morten Ø. Jensen

Ammonium Recruitment and Ammonia Transport by E. coli Ammonia Channel AmtB
Biophys. J. 2006 91: 4401-4412; Published ahead of print on September 29, 2006 as doi:10.1529/biophysj.106.089714. [Abstract] [Full Text] [PDF]  

MEMBRANES:

David J. Schibli, Leonard T. Nguyen, Stephanie D. Kernaghan, Øystein Rekdal, and Hans J. Vogel

Structure-Function Analysis of Tritrpticin Analogs: Potential Relationships between Antimicrobial Activities, Model Membrane Interactions, and Their Micelle-Bound NMR Structures
Biophys. J. 2006 91: 4413-4426; Published ahead of print on September 22, 2006 as doi:10.1529/biophysj.106.085837. [Abstract] [Full Text] [PDF]  

Yegor A. Domanov and Paavo K. J. Kinnunen

Antimicrobial Peptides Temporins B and L Induce Formation of Tubular Lipid Protrusions from Supported Phospholipid Bilayers
Biophys. J. 2006 91: 4427-4439; Published ahead of print on September 22, 2006 as doi:10.1529/biophysj.106.091702. [Abstract] [Full Text] [PDF] [Supplement]  

Xavier León, Raymonde Lemonnier, Gérard Leblanc, and Esteve Padrós

Changes in Secondary Structures and Acidic Side Chains of Melibiose Permease upon Cosubstrates Binding
Biophys. J. 2006 91: 4440-4449; Published ahead of print on September 29, 2006 as doi:10.1529/biophysj.106.090241. [Abstract] [Full Text] [PDF]  

Anna C. V. Johansson and Erik Lindahl

Amino-Acid Solvation Structure in Transmembrane Helices from Molecular Dynamics Simulations
Biophys. J. 2006 91: 4450-4463; Published ahead of print on September 29, 2006 as doi:10.1529/biophysj.106.092767. [Abstract] [Full Text] [PDF]  

Ana Vitória Botelho, Thomas Huber, Thomas P. Sakmar, and Michael F. Brown

Curvature and Hydrophobic Forces Drive Oligomerization and Modulate Activity of Rhodopsin in Membranes
Biophys. J. 2006 91: 4464-4477; Published ahead of print on September 29, 2006 as doi:10.1529/biophysj.106.082776. [Abstract] [Full Text] [PDF] [Supplement]  

David A. Keire, Mohanraja Kumar, Weidong Hu, James Sinnett-Smith, and Enrique Rozengurt

The Lipid-Associated 3D Structure of SPA, a Broad-Spectrum Neuropeptide Antagonist with Anticancer Properties
Biophys. J. 2006 91: 4478-4489; Published ahead of print on September 22, 2006 as doi:10.1529/biophysj.106.089292. [Abstract] [Full Text] [PDF]  

MUSCLE AND CONTRACTILITY:

Andras Muhlrad, Israel Ringel, Dmitry Pavlov, Y. Michael Peyser, and Emil Reisler

Antagonistic Effects of Cofilin, Beryllium Fluoride Complex, and Phalloidin on Subdomain 2 and Nucleotide-Binding Cleft in F-Actin
Biophys. J. 2006 91: 4490-4499; Published ahead of print on September 22, 2006 as doi:10.1529/biophysj.106.087767. [Abstract] [Full Text] [PDF]  

Yudong Hao, Mark S. Miller, Douglas M. Swank, Hongjun Liu, Sanford I. Bernstein, David W. Maughan, and Gerald H. Pollack

Passive Stiffness in Drosophila Indirect Flight Muscle Reduced by Disrupting Paramyosin Phosphorylation, but Not by Embryonic Myosin S2 Hinge Substitution
Biophys. J. 2006 91: 4500-4506; Published ahead of print on September 29, 2006 as doi:10.1529/biophysj.106.088492. [Abstract] [Full Text] [PDF]  

NUCLEIC ACIDS:

Alexey K. Mazur

Evaluation of Elastic Properties of Atomistic DNA Models
Biophys. J. 2006 91: 4507-4518; Published ahead of print on September 29, 2006 as doi:10.1529/biophysj.106.091280. [Abstract] [Full Text] [PDF]  

PHOTOBIOPHYSICS:

Oleg A. Sineshchekov, Elena N. Spudich, Vishwa D. Trivedi, and John L. Spudich

Role of the Cytoplasmic Domain in Anabaena Sensory Rhodopsin Photocycling: Vectoriality of Schiff Base Deprotonation
Biophys. J. 2006 91: 4519-4527; Published ahead of print on September 29, 2006 as doi:10.1529/biophysj.106.093641. [Abstract] [Full Text] [PDF]  

PROTEINS:

Ning Du, Xiang Yang Liu, Janaky Narayanan, Lian Li, Matthew Lek Min Lim, and Daiqin Li

Design of Superior Spider Silk: From Nanostructure to Mechanical Properties
Biophys. J. 2006 91: 4528-4535; Published ahead of print on September 1, 2006 as doi:10.1529/biophysj.106.089144. [Abstract] [Full Text] [PDF]  

Pau Bernadó, Martin Blackledge, and Javier Sancho

Sequence-Specific Solvent Accessibilities of Protein Residues in Unfolded Protein Ensembles
Biophys. J. 2006 91: 4536-4543; Published ahead of print on September 29, 2006 as doi:10.1529/biophysj.106.087528. [Abstract] [Full Text] [PDF] [Supplement]  

Voichita M. Dadarlat and Carol Beth Post

Decomposition of Protein Experimental Compressibility into Intrinsic and Hydration Shell Contributions
Biophys. J. 2006 91: 4544-4554; Published ahead of print on September 22, 2006 as doi:10.1529/biophysj.106.087726. [Abstract] [Full Text] [PDF] [Supplement]  

Michael Hayley, Jason Emberley, Philip J. Davis, Michael R. Morrow, and John J. Robinson

Interaction of Toposome from Sea-Urchin Yolk Granules with Dimyristoyl Phosphatidylserine Model Membranes: A ²H-NMR Study
Biophys. J. 2006 91: 4555-4564; Published ahead of print on September 29, 2006 as doi:10.1529/biophysj.106.089979. [Abstract] [Full Text] [PDF]  

SUPRAMOLECULAR ASSEMBLIES:

Andrea L. Slade, Joseph S. Schoeniger, Darryl Y. Sasaki, and Christopher M. Yip

In Situ Scanning Probe Microscopy Studies of Tetanus Toxin-Membrane Interactions
Biophys. J. 2006 91: 4565-4574; Published ahead of print on September 22, 2006 as doi:10.1529/biophysj.105.080457. [Abstract] [Full Text] [PDF]  

Claudio Canale, Silvia Torrassa, Pasquale Rispoli, Annalisa Relini, Ranieri Rolandi, Monica Bucciantini, Massimo Stefani, and Alessandra Gliozzi

Natively Folded HypF-N and Its Early Amyloid Aggregates Interact with Phospholipid Monolayers and Destabilize Supported Phospholipid Bilayers
Biophys. J. 2006 91: 4575-4588; Published ahead of print on September 22, 2006 as doi:10.1529/biophysj.106.089482. [Abstract] [Full Text] [PDF]  

Anton Arkhipov, Peter L. Freddolino, Katsumi Imada, Keiichi Namba, and Klaus Schulten

Coarse-Grained Molecular Dynamics Simulations of a Rotating Bacterial Flagellum
Biophys. J. 2006 91: 4589-4597; Published ahead of print on September 22, 2006 as doi:10.1529/biophysj.106.093443. [Abstract] [Full Text] [PDF] [Supplement]  

David Lasne, Gerhard A. Blab, Stéphane Berciaud, Martin Heine, Laurent Groc, Daniel Choquet, Laurent Cognet, and Brahim Lounis

Single Nanoparticle Photothermal Tracking (SNaPT) of 5-nm Gold Beads in Live Cells
Biophys. J. 2006 91: 4598-4604; Published ahead of print on September 22, 2006 as doi:10.1529/biophysj.106.089771. [Abstract] [Full Text] [PDF] [Supplement]  

SPECTROSCOPY, IMAGING, OTHER TECHNIQUES:

Bálint Kintses, Zoltán Simon, Máté Gyimesi, Júlia Tóth, Balázs Jelinek, Csaba Niedetzky, Mihály Kovács, and András Málnási-Csizmadia

Enzyme Kinetics above Denaturation Temperature: A Temperature-Jump/Stopped-Flow Apparatus
Biophys. J. 2006 91: 4605-4610; Published ahead of print on September 29, 2006 as doi:10.1529/biophysj.106.092833. [Abstract] [Full Text] [PDF]  

Jonathan W. D. Comeau, Santiago Costantino, and Paul W. Wiseman

A Guide to Accurate Fluorescence Microscopy Colocalization Measurements
Biophys. J. 2006 91: 4611-4622; Published ahead of print on September 29, 2006 as doi:10.1529/biophysj.106.089441. [Abstract] [Full Text] [PDF]  

Tennille Presley, Periannan Kuppusamy, Jay L. Zweier, and Govindasamy Ilangovan

Electron Paramagnetic Resonance Oximetry as a Quantitative Method to Measure Cellular Respiration: A Consideration of Oxygen Diffusion Interference
Biophys. J. 2006 91: 4623-4631; Published ahead of print on September 29, 2006 as doi:10.1529/biophysj.106.090175. [Abstract] [Full Text] [PDF]  

T. Roopa and G. V. Shivashankar

Direct Measurement of Local Chromatin Fluidity Using Optical Trap Modulation Force Spectroscopy
Biophys. J. 2006 91: 4632-4637; Published ahead of print on September 29, 2006 as doi:10.1529/biophysj.106.086827. [Abstract] [Full Text] [PDF]  

CELL BIOPHYSICS:

Kheya Sengupta, Helim Aranda-Espinoza, Lee Smith, Paul Janmey, and Daniel Hammer

Spreading of Neutrophils: From Activation to Migration
Biophys. J. 2006 91: 4638-4648; Published ahead of print on September 29, 2006 as doi:10.1529/biophysj.105.080382. [Abstract] [Full Text] [PDF]  

A. C. Rowat, J. Lammerding, and J. H. Ipsen

Mechanical Properties of the Cell Nucleus and the Effect of Emerin Deficiency
Biophys. J. 2006 91: 4649-4664; Published ahead of print on September 22, 2006 as doi:10.1529/biophysj.106.086454. [Abstract] [Full Text] [PDF]  

Theodossis A. Theodossiou, Christopher Thrasivoulou, Chidi Ekwobi, and David L. Becker

Second Harmonic Generation Confocal Microscopy of Collagen Type I from Rat Tendon Cryosections
Biophys. J. 2006 91: 4665-4677. [Abstract] [Full Text] [PDF]  

Qingqing Wu, Chunhe Chen, and Yiannis Koutalos

All-Trans Retinol in Rod Photoreceptor Outer Segments Moves Unrestrictedly by Passive Diffusion
Biophys. J. 2006 91: 4678-4689; Published ahead of print on September 29, 2006 as doi:10.1529/biophysj.106.086728. [Abstract] [Full Text] [PDF]  

COMMENTS TO THE EDITOR:

Zimei Rong and Pankaj Vadgama

Bipartite Expressions for Diffusional Mass Transport in Biomembranes
Biophys. J. 2006 91: 4690-4696; Published ahead of print on September 22, 2006 as doi:10.1529/biophysj.106.088153. [Abstract] [Full Text] [PDF]  

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