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 Contents: Volume 91, Issue 6, September 2006   [Index by Author] 
      Down BIOPHYSICAL LETTERS
      Down BIOPHYSICAL THEORY AND MODELING
      Down CHANNELS, RECEPTORS, AND ELECTRICAL SIGNALING
      Down MEMBRANES
      Down NUCLEIC ACIDS
      Down PROTEINS
      Down SUPRAMOLECULAR ASSEMBLIES
      Down SPECTROSCOPY, IMAGING, OTHER TECHNIQUES
      Down CELL BIOPHYSICS
      Down ELECTROPHYSIOLOGY
      Down OTHER
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To see an article, click its [Full Text] or [PDF] link. To review many abstracts, check the boxes to the left of the titles you want, and click the 'Get All Checked Abstract(s)' button. To see one abstract at a time, click its [Abstract] link.

BIOPHYSICAL LETTERS:Back

Zhenyu Lu, Hao Hu, Weitao Yang, and Piotr E. Marszalek
Simulating Force-Induced Conformational Transitions in Polysaccharides with the SMD Replica Exchange Method
Biophys. J. 2006 91: L57-L59; Published ahead of print on July 7, 2006 as doi:10.1529/biophysj.106.090324. [Abstract] [Full Text] [PDF]  

Thorsten Erdmann and Ulrich S. Schwarz
Bistability of Cell-Matrix Adhesions Resulting from Nonlinear Receptor-Ligand Dynamics
Biophys. J. 2006 91: L60-L62; Published ahead of print on July 7, 2006 as doi:10.1529/biophysj.106.090209. [Abstract] [Full Text] [PDF]  

Wonchul Shin and Kevin D. Gillis
Measurement of Changes in Membrane Surface Morphology Associated with Exocytosis Using Scanning Ion Conductance Microscopy
Biophys. J. 2006 91: L63-L65; Published ahead of print on July 14, 2006 as doi:10.1529/biophysj.106.088559. [Abstract] [Full Text] [PDF] [Supplement]  

Bradley C. Steel, David R. McKenzie, Marcela M. M. Bilek, Neil J. Nosworthy, and Cristobal G. dos Remedios
Nanosecond Responses of Proteins to Ultra-High Temperature Pulses
Biophys. J. 2006 91: L66-L68; Published ahead of print on July 14, 2006 as doi:10.1529/biophysj.106.090944. [Abstract] [Full Text] [PDF] [Supplement]  

Ashish, Renu Garg, Juan Anguita, and Joanna K. Krueger
Binding of Full-Length HIV-1 gp120 to CD4 Induces Structural Reorientation around the gp120 Core
Biophys. J. 2006 91: L69-L71; Published ahead of print on July 14, 2006 as doi:10.1529/biophysj.106.090381. [Abstract] [Full Text] [PDF] [Supplement]  

Fatemeh Khalili-Araghi, Emad Tajkhorshid, and Klaus Schulten
Dynamics of K+ Ion Conduction through Kv1.2
Biophys. J. 2006 91: L72-L74; Published ahead of print on July 14, 2006 as doi:10.1529/biophysj.106.091926. [Abstract] [Full Text] [PDF] [Supplement]  

BIOPHYSICAL THEORY AND MODELING:Back

Gen Kurosawa, Kazuyuki Aihara, and Yoh Iwasa
A Model for the Circadian Rhythm of Cyanobacteria that Maintains Oscillation without Gene Expression
Biophys. J. 2006 91: 2015-2023; Published ahead of print on June 23, 2006 as doi:10.1529/biophysj.105.076554. [Abstract] [Full Text] [PDF]  

Ivan Degtyarenko, Risto M. Nieminen, and Carme Rovira
Structure and Dynamics of Dioxygen Bound to Cobalt and Iron Heme
Biophys. J. 2006 91: 2024-2034; Published ahead of print on June 2, 2006 as doi:10.1529/biophysj.106.083048. [Abstract] [Full Text] [PDF]  

Vitor H. Teixeira, António M. Baptista, and Cláudio M. Soares
Pathways of H2 toward the Active Site of [NiFe]-Hydrogenase
Biophys. J. 2006 91: 2035-2045; Published ahead of print on May 26, 2006 as doi:10.1529/biophysj.106.084376. [Abstract] [Full Text] [PDF] [Supplement]  

Kristen E. Norman and Hugh Nymeyer
Indole Localization in Lipid Membranes Revealed by Molecular Simulation
Biophys. J. 2006 91: 2046-2054; Published ahead of print on June 30, 2006 as doi:10.1529/biophysj.105.080275. [Abstract] [Full Text] [PDF]  

Rhoda J. Hawkins and Tom C. B. McLeish
Coupling of Global and Local Vibrational Modes in Dynamic Allostery of Proteins
Biophys. J. 2006 91: 2055-2062; Published ahead of print on June 23, 2006 as doi:10.1529/biophysj.106.082180. [Abstract] [Full Text] [PDF]  

Marco Berrera, Antonino Cattaneo, and Paolo Carloni
Molecular Simulation of the Binding of Nerve Growth Factor Peptide Mimics to the Receptor Tyrosine Kinase A
Biophys. J. 2006 91: 2063-2071; Published ahead of print on June 23, 2006 as doi:10.1529/biophysj.106.083519. [Abstract] [Full Text] [PDF] [Supplement]  

Yoshihiro Morishita, Tetsuya J. Kobayashi, and Kazuyuki Aihara
An Optimal Number of Molecules for Signal Amplification and Discrimination in a Chemical Cascade
Biophys. J. 2006 91: 2072-2081; Published ahead of print on June 23, 2006 as doi:10.1529/biophysj.105.070797. [Abstract] [Full Text] [PDF]  

Craig S. Nunemaker, Richard Bertram, Arthur Sherman, Krasimira Tsaneva-Atanasova, Camille R. Daniel, and Leslie S. Satin
Glucose Modulates [Ca2+]i Oscillations in Pancreatic Islets via Ionic and Glycolytic Mechanisms
Biophys. J. 2006 91: 2082-2096; Published ahead of print on June 30, 2006 as doi:10.1529/biophysj.106.087296. [Abstract] [Full Text] [PDF]  

Jin Yu, Taekjip Ha, and Klaus Schulten
Structure-Based Model of the Stepping Motor of PcrA Helicase
Biophys. J. 2006 91: 2097-2114; Published ahead of print on June 30, 2006 as doi:10.1529/biophysj.106.088203. [Abstract] [Full Text] [PDF] [Supplement]  

Holger Gohlke and M. F. Thorpe
A Natural Coarse Graining for Simulating Large Biomolecular Motion
Biophys. J. 2006 91: 2115-2120; Published ahead of print on June 30, 2006 as doi:10.1529/biophysj.106.083568. [Abstract] [Full Text] [PDF]  

Anthony R. Geonnotti and David F. Katz
Dynamics of HIV Neutralization by a Microbicide Formulation Layer: Biophysical Fundamentals and Transport Theory
Biophys. J. 2006 91: 2121-2130; Published ahead of print on June 30, 2006 as doi:10.1529/biophysj.106.086322. [Abstract] [Full Text] [PDF]  

Rudiyanto Gunawan and Francis J. Doyle, III
Isochron-Based Phase Response Analysis of Circadian Rhythms
Biophys. J. 2006 91: 2131-2141; Published ahead of print on June 30, 2006 as doi:10.1529/biophysj.105.078006. [Abstract] [Full Text] [PDF]  

CHANNELS, RECEPTORS, AND ELECTRICAL SIGNALING:Back

Jun-Jie Tong and Lisa Ebihara
Structural Determinants for the Differences in Voltage Gating of Chicken Cx56 and Cx45.6 Gap-Junctional Hemichannels
Biophys. J. 2006 91: 2142-2154; Published ahead of print on June 23, 2006 as doi:10.1529/biophysj.106.082859. [Abstract] [Full Text] [PDF]  

Jay Yang, Qing Cheng, Ayako Takahashi, and Farida Goubaeva
Kinetic Properties of GABA {rho}1 Homomeric Receptors Expressed in HEK293 Cells
Biophys. J. 2006 91: 2155-2162; Published ahead of print on June 23, 2006 as doi:10.1529/biophysj.106.085431. [Abstract] [Full Text] [PDF]  

MEMBRANES:Back

Eva K. Schmitt, Maarten Vrouenraets, and Claudia Steinem
Channel Activity of OmpF Monitored in Nano-BLMs
Biophys. J. 2006 91: 2163-2171; Published ahead of print on June 16, 2006 as doi:10.1529/biophysj.106.083592. [Abstract] [Full Text] [PDF]  

Artem G. Ayuyan and Fredric S. Cohen
Lipid Peroxides Promote Large Rafts: Effects of Excitation of Probes in Fluorescence Microscopy and Electrochemical Reactions during Vesicle Formation
Biophys. J. 2006 91: 2172-2183; Published ahead of print on June 30, 2006 as doi:10.1529/biophysj.106.087387. [Abstract] [Full Text] [PDF]  

Antje Pokorny, Lindsay E. Yandek, Adekunle I. Elegbede, Anne Hinderliter, and Paulo F. F. Almeida
Temperature and Composition Dependence of the Interaction of {delta}-Lysin with Ternary Mixtures of Sphingomyelin/Cholesterol/POPC
Biophys. J. 2006 91: 2184-2197; Published ahead of print on June 23, 2006 as doi:10.1529/biophysj.106.085027. [Abstract] [Full Text] [PDF]  

Kenichiro Koshiyama, Tetsuya Kodama, Takeru Yano, and Shigeo Fujikawa
Structural Change in Lipid Bilayers and Water Penetration Induced by Shock Waves: Molecular Dynamics Simulations
Biophys. J. 2006 91: 2198-2205; Published ahead of print on June 23, 2006 as doi:10.1529/biophysj.105.077677. [Abstract] [Full Text] [PDF]  

Sandrine Pouvreau, Laszlo Csernoch, Bruno Allard, Jean Marc Sabatier, Michel De Waard, Michel Ronjat, and Vincent Jacquemond
Transient Loss of Voltage Control of Ca2+ Release in the Presence of Maurocalcine in Skeletal Muscle
Biophys. J. 2006 91: 2206-2215; Published ahead of print on June 16, 2006 as doi:10.1529/biophysj.105.078089. [Abstract] [Full Text] [PDF]  

Brenda Schoffstall, Amanda Clark, and P. Bryant Chase
Positive Inotropic Effects of Low dATP/ATP Ratios on Mechanics and Kinetics of Porcine Cardiac Muscle
Biophys. J. 2006 91: 2216-2226; Published ahead of print on June 23, 2006 as doi:10.1529/biophysj.105.079061. [Abstract] [Full Text] [PDF]  

NUCLEIC ACIDS:Back

Arthi Jayaraman, Carol K. Hall, and Jan Genzer
Computer Simulation Study of Molecular Recognition in Model DNA Microarrays
Biophys. J. 2006 91: 2227-2236. [Abstract] [Full Text] [PDF]  

Boualem Hammouda and David Worcester
The Denaturation Transition of DNA in Mixed Solvents
Biophys. J. 2006 91: 2237-2242; Published ahead of print on June 30, 2006 as doi:10.1529/biophysj.106.083691. [Abstract] [Full Text] [PDF]  

PROTEINS:Back

P. Tompa, P. Bánki, M. Bokor, P. Kamasa, D. Kovács, G. Lasanda, and K. Tompa
Protein-Water and Protein-Buffer Interactions in the Aqueous Solution of an Intrinsically Unstructured Plant Dehydrin: NMR Intensity and DSC Aspects
Biophys. J. 2006 91: 2243-2249; Published ahead of print on June 23, 2006 as doi:10.1529/biophysj.106.084723. [Abstract] [Full Text] [PDF]  

Inés García-Rubio, Milagros Medina, Richard Cammack, Pablo J. Alonso, and Jesús I. Martínez
CW-EPR and ENDOR Study of Cytochrome c6 from Anabaena PCC 7119
Biophys. J. 2006 91: 2250-2263; Published ahead of print on June 23, 2006 as doi:10.1529/biophysj.105.080358. [Abstract] [Full Text] [PDF] [Supplement]  

J. Font, J. Torrent, M. Ribó, D. V. Laurents, C. Balny, M. Vilanova, and R. Lange
Pressure-Jump-Induced Kinetics Reveals a Hydration Dependent Folding/Unfolding Mechanism of Ribonuclease A
Biophys. J. 2006 91: 2264-2274; Published ahead of print on June 23, 2006 as doi:10.1529/biophysj.106.082552. [Abstract] [Full Text] [PDF]  

SUPRAMOLECULAR ASSEMBLIES:Back

Marco Diociaiuti, Laura Zanetti Polzi, Luisa Valvo, Fiorella Malchiodi-Albedi, Cecilia Bombelli, and Maria Cristina Gaudiano
Calcitonin Forms Oligomeric Pore-Like Structures in Lipid Membranes
Biophys. J. 2006 91: 2275-2281. [Abstract] [Full Text] [PDF]  

SPECTROSCOPY, IMAGING, OTHER TECHNIQUES:Back

Eeva-Liisa Karjalainen, Amelie Hardell, and Andreas Barth
Toward a General Method to Observe the Phosphate Groups of Phosphoenzymes with Infrared Spectroscopy
Biophys. J. 2006 91: 2282-2289; Published ahead of print on June 23, 2006 as doi:10.1529/biophysj.106.084442. [Abstract] [Full Text] [PDF]  

Fei Wu, Xueqian Zhang, Joseph Y. Cheung, Kebin Shi, Zhiwen Liu, Claire Luo, Stuart Yin, and Paul Ruffin
Frequency Division Multiplexed Multichannel High-Speed Fluorescence Confocal Microscope
Biophys. J. 2006 91: 2290-2296; Published ahead of print on June 30, 2006 as doi:10.1529/biophysj.106.083337. [Abstract] [Full Text] [PDF]  

CELL BIOPHYSICS:Back

Bidisha Banerjee, Dipanjan Bhattacharya, and G.V. Shivashankar
Chromatin Structure Exhibits Spatio-Temporal Heterogeneity within the Cell Nucleus
Biophys. J. 2006 91: 2297-2303; Published ahead of print on June 30, 2006 as doi:10.1529/biophysj.105.079525. [Abstract] [Full Text] [PDF] [Supplement]  

Zeba Wunderlich and Leonid A. Mirny
Using the Topology of Metabolic Networks to Predict Viability of Mutant Strains
Biophys. J. 2006 91: 2304-2311; Published ahead of print on June 16, 2006 as doi:10.1529/biophysj.105.080572. [Abstract] [Full Text] [PDF] [Supplement]  

Khuloud Jaqaman, Jonas F. Dorn, Gregory S. Jelson, Jessica D. Tytell, Peter K. Sorger, and Gaudenz Danuser
Comparative Autoregressive Moving Average Analysis of Kinetochore Microtubule Dynamics in Yeast
Biophys. J. 2006 91: 2312-2325. [Abstract] [Full Text] [PDF] [Supplement]  

Dipanjan Bhattacharya, Aprotim Mazumder, S. Annie Miriam, and G. V. Shivashankar
EGFP-Tagged Core and Linker Histones Diffuse via Distinct Mechanisms within Living Cells
Biophys. J. 2006 91: 2326-2336; Published ahead of print on June 30, 2006 as doi:10.1529/biophysj.105.079343. [Abstract] [Full Text] [PDF] [Supplement]  

ELECTROPHYSIOLOGY:Back

Rolf Vogel, Virginijus Valiunas, and Robert Weingart
Subconductance States of Cx30 Gap Junction Channels: Data from Transfected HeLa Cells versus Data from a Mathematical Model
Biophys. J. 2006 91: 2337-2348; Published ahead of print on June 16, 2006 as doi:10.1529/biophysj.106.084186. [Abstract] [Full Text] [PDF]  

Boris Reynaud and Thomas M. Quinn
Tensorial Electrokinetics in Articular Cartilage
Biophys. J. 2006 91: 2349-2355; Published ahead of print on June 23, 2006 as doi:10.1529/biophysj.106.082263. [Abstract] [Full Text] [PDF]  

OTHER:Back

Kinuko Masaki, Thomas F. Weiss, and Dennis M. Freeman
Poroelastic Bulk Properties of the Tectorial Membrane Measured with Osmotic Stress
Biophys. J. 2006 91: 2356-2370; Published ahead of print on June 30, 2006 as doi:10.1529/biophysj.105.078121. [Abstract] [Full Text] [PDF]  

E. C. Hulme, A. K. Soper, S. E. McLain, and J. L. Finney
The Hydration of the Neurotransmitter Acetylcholine in Aqueous Solution
Biophys. J. 2006 91: 2371-2380; Published ahead of print on June 23, 2006 as doi:10.1529/biophysj.106.089185. [Abstract] [Full Text] [PDF]  

To see an article, click its [Full Text] or [PDF] link. To review many abstracts, check the boxes to the left of the titles you want, and click the 'Get All Checked Abstract(s)' button. To see one abstract at a time, click its [Abstract] link.


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