Biophysical Journal -- Table of Contents (91 [7])

BIOPHYSICAL THEORY AND MODELING:

Bernhard Windisch, Dennis Bray, and Thomas Duke: Balls and Chains—A Mesoscopic Approach to Tethered Protein Domains
Biophys. J. 2006 91: 2383-2392; Published ahead of print on July 7, 2006 as doi:10.1529/biophysj.105.078543. [Abstract] [Full Text] [PDF]

Gernot Guigas and Matthias Weiss: Size-Dependent Diffusion of Membrane Inclusions
Biophys. J. 2006 91: 2393-2398; Published ahead of print on July 7, 2006 as doi:10.1529/biophysj.106.087031. [Abstract] [Full Text] [PDF]

Lixin Zhan, Jeff Z. Y. Chen, and Wing-Ki Liu: Conformational Study of Met-Enkephalin Based on the ECEPP Force Fields
Biophys. J. 2006 91: 2399-2404; Published ahead of print on July 7, 2006 as doi:10.1529/biophysj.106.083899. [Abstract] [Full Text] [PDF]

David Holcman and Antoine Triller: Modeling Synaptic Dynamics Driven by Receptor Lateral Diffusion
Biophys. J. 2006 91: 2405-2415; Published ahead of print on July 14, 2006 as doi:10.1529/biophysj.106.081935. [Abstract] [Full Text] [PDF]

William H. Mather and Ronald F. Fox: Kinesin's Biased Stepping Mechanism: Amplification of Neck Linker Zippering
Biophys. J. 2006 91: 2416-2426; Published ahead of print on July 14, 2006 as doi:10.1529/biophysj.106.087049. [Abstract] [Full Text] [PDF]

Jason K. Cheung, Pooja Shah, and Thomas M. Truskett: Heteropolymer Collapse Theory for Protein Folding in the Pressure-Temperature Plane
Biophys. J. 2006 91: 2427-2435; Published ahead of print on July 14, 2006 as doi:10.1529/biophysj.106.081802. [Abstract] [Full Text] [PDF]

Assaf Ganoth, Ran Friedman, Esther Nachliel, and Menachem Gutman: A Molecular Dynamics Study and Free Energy Analysis of Complexes between the Mlc1p Protein and Two IQ Motif Peptides
Biophys. J. 2006 91: 2436-2450; Published ahead of print on July 14, 2006 as doi:10.1529/biophysj.106.085399. [Abstract] [Full Text] [PDF]

Xiaoqin Huang and Huan-Xiang Zhou: Similarity and Difference in the Unfolding of Thermophilic and Mesophilic Cold Shock Proteins Studied by Molecular Dynamics Simulations
Biophys. J. 2006 91: 2451-2463; Published ahead of print on July 14, 2006 as doi:10.1529/biophysj.106.082891. [Abstract] [Full Text] [PDF]

Daniel J. V. A. dos Santos and Leif A. Eriksson: Permeability of Psoralen Derivatives in Lipid Membranes
Biophys. J. 2006 91: 2464-2474; Published ahead of print on July 14, 2006 as doi:10.1529/biophysj.105.077156. [Abstract] [Full Text] [PDF]

Karl I. Skau, Rebecca B. Hoyle, and Matthew S. Turner: A Kinetic Model Describing the Processivity of Myosin-V
Biophys. J. 2006 91: 2475-2489; Published ahead of print on June 30, 2006 as doi:10.1529/biophysj.105.070888. [Abstract] [Full Text] [PDF]

MEMBRANES:

Xiuhong Zhai, Xin-Min Li, Maureen M. Momsen, Howard L. Brockman, and Rhoderick E. Brown: Lactosylceramide: Lateral Interactions with Cholesterol
Biophys. J. 2006 91: 2490-2500; Published ahead of print on July 7, 2006 as doi:10.1529/biophysj.106.084921. [Abstract] [Full Text] [PDF]

Vahid Shahedi, Greger Orädd, and Göran Lindblom: Domain-Formation in DOPC/SM Bilayers Studied by pfg-NMR: Effect of Sterol Structure
Biophys. J. 2006 91: 2501-2507; Published ahead of print on July 7, 2006 as doi:10.1529/biophysj.106.085480. [Abstract] [Full Text] [PDF]

Boris G. Tenchov, Robert C. MacDonald, and David P. Siegel: Cubic Phases in Phosphatidylcholine-Cholesterol Mixtures: Cholesterol as Membrane "Fusogen"
Biophys. J. 2006 91: 2508-2516; Published ahead of print on July 7, 2006 as doi:10.1529/biophysj.106.083766. [Abstract] [Full Text] [PDF]

David Y. Haubertin, Hocine Madaoui, Alain Sanson, Raphaël Guérois, and Stéphane Orlowski: Molecular Dynamics Simulations of E. coli MsbA Transmembrane Domain: Formation of a Semipore Structure
Biophys. J. 2006 91: 2517-2531; Published ahead of print on June 16, 2006 as doi:10.1529/biophysj.106.084020. [Abstract] [Full Text] [PDF] [Supplement]

Michael J. Higgins, Martin Polcik, Takeshi Fukuma, John E. Sader, Yoshikazu Nakayama, and Suzanne P. Jarvis: Structured Water Layers Adjacent to Biological Membranes
Biophys. J. 2006 91: 2532-2542; Published ahead of print on June 23, 2006 as doi:10.1529/biophysj.106.085688. [Abstract] [Full Text] [PDF]

MUSCLE AND CONTRACTILITY:

Norbert Klauke, Godfrey L. Smith, and Jon Cooper: Extracellular Recordings of Field Potentials from Single Cardiomyocytes
Biophys. J. 2006 91: 2543-2551; Published ahead of print on July 14, 2006 as doi:10.1529/biophysj.106.085183. [Abstract] [Full Text] [PDF] [Supplement]

NUCLEIC ACIDS:

Lou-sing Kan, Laura Pasternack, Ming-Tsair Wey, Yu-Yu Tseng, and Dee-Hua Huang: The Paperclip Triplex: Understanding the Role of Apex Residues in Tight Turns
Biophys. J. 2006 91: 2552-2563; Published ahead of print on July 7, 2006 as doi:10.1529/biophysj.106.084137. [Abstract] [Full Text] [PDF]

PROTEINS:

Gábor Papp, Beáta Bugyi, Zoltán Ujfalusi, Szilvia Barkó, Gábor Hild, Béla Somogyi, and Miklós Nyitrai: Conformational Changes in Actin Filaments Induced by Formin Binding to the Barbed End
Biophys. J. 2006 91: 2564-2572; Published ahead of print on July 7, 2006 as doi:10.1529/biophysj.106.087775. [Abstract] [Full Text] [PDF]

J. H. Roh, J. E. Curtis, S. Azzam, V. N. Novikov, I. Peral, Z. Chowdhuri, R. B. Gregory, and A. P. Sokolov: Influence of Hydration on the Dynamics of Lysozyme
Biophys. J. 2006 91: 2573-2588; Published ahead of print on July 14, 2006 as doi:10.1529/biophysj.106.082214. [Abstract] [Full Text] [PDF]

Esmael J. Haddadian and Elizabeth L. Gross: A Brownian Dynamics Study of the Interactions of the Luminal Domains of the Cytochrome b₆f complex with Plastocyanin and Cytochrome c₆: The Effects of the Rieske FeS Protein on the Interactions
Biophys. J. 2006 91: 2589-2600; Published ahead of print on July 14, 2006 as doi:10.1529/biophysj.106.085936. [Abstract] [Full Text] [PDF]

Laura Treccani, Karlheinz Mann, Fabian Heinemann, and Monika Fritz: Perlwapin, an Abalone Nacre Protein with Three Four-Disulfide Core (Whey Acidic Protein) Domains, Inhibits the Growth of Calcium Carbonate Crystals
Biophys. J. 2006 91: 2601-2608; Published ahead of print on July 21, 2006 as doi:10.1529/biophysj.106.086108. [Abstract] [Full Text] [PDF]

Leslie M. Hicks, Carl J. Balibar, Christopher T. Walsh, Neil L. Kelleher, and Nathan J. Hillson: Probing Intra- versus Interchain Kinetic Preferences of L-Thr Acylation on Dimeric VibF with Mass Spectrometry
Biophys. J. 2006 91: 2609-2619; Published ahead of print on June 30, 2006 as doi:10.1529/biophysj.106.084848. [Abstract] [Full Text] [PDF] [Supplement]

SPECTROSCOPY, IMAGING, OTHER TECHNIQUES:

Yen Sun, Wei-Liang Chen, Sung-Jan Lin, Shiou-Hwa Jee, Yang-Fang Chen, Ling-Chih Lin, Peter T. C. So, and Chen-Yuan Dong: Investigating Mechanisms of Collagen Thermal Denaturation by High Resolution Second-Harmonic Generation Imaging
Biophys. J. 2006 91: 2620-2625; Published ahead of print on July 7, 2006 as doi:10.1529/biophysj.106.085902. [Abstract] [Full Text] [PDF]

J. Borejdo, Z. Gryczynski, N. Calander, P. Muthu, and I. Gryczynski: Application of Surface Plasmon Coupled Emission to Study of Muscle
Biophys. J. 2006 91: 2626-2635; Published ahead of print on July 14, 2006 as doi:10.1529/biophysj.106.088369. [Abstract] [Full Text] [PDF]

Ziad Ganim and Andrei Tokmakoff: Spectral Signatures of Heterogeneous Protein Ensembles Revealed by MD Simulations of 2DIR Spectra
Biophys. J. 2006 91: 2636-2646; Published ahead of print on July 14, 2006 as doi:10.1529/biophysj.106.088070. [Abstract] [Full Text] [PDF] [Supplement]

Christian Beier and Heinz-Jürgen Steinhoff: A Structure-Based Simulation Approach for Electron Paramagnetic Resonance Spectra Using Molecular and Stochastic Dynamics Simulations
Biophys. J. 2006 91: 2647-2664; Published ahead of print on July 14, 2006 as doi:10.1529/biophysj.105.080051. [Abstract] [Full Text] [PDF]

Miklós S. Z. Kellermayer, Árpád Karsai, András Kengyel, Attila Nagy, Pasquale Bianco, Tamás Huber, Ágnes Kulcsár, Csaba Niedetzky, Roger Proksch, and László Grama: Spatially and Temporally Synchronized Atomic Force and Total Internal Reflection Fluorescence Microscopy for Imaging and Manipulating Cells and Biomolecules
Biophys. J. 2006 91: 2665-2677; Published ahead of print on July 21, 2006 as doi:10.1529/biophysj.106.085456. [Abstract] [Full Text] [PDF]

Brian P. Lynch, Al M. Hilton, and Garth J. Simpson: Nanoscale Dielectrophoretic Spectroscopy of Individual Immobilized Mammalian Blood Cells
Biophys. J. 2006 91: 2678-2686; Published ahead of print on June 23, 2006 as doi:10.1529/biophysj.106.082412. [Abstract] [Full Text] [PDF] [Supplement]

Bin Wu, Yan Chen, and Joachim D. Müller: Dual-Color Time-Integrated Fluorescence Cumulant Analysis
Biophys. J. 2006 91: 2687-2698; Published ahead of print on June 30, 2006 as doi:10.1529/biophysj.106.086181. [Abstract] [Full Text] [PDF]

CELL BIOPHYSICS:

Sidhartha S. Jena, Hiren M. Joshi, K. P. V. Sabareesh, B. V. R. Tata, and T. S. Rao: Dynamics of Deinococcus radiodurans under Controlled Growth Conditions
Biophys. J. 2006 91: 2699-2707; Published ahead of print on July 7, 2006 as doi:10.1529/biophysj.106.086520. [Abstract] [Full Text] [PDF]

Balázs Hegedüs, Françoise Marga, Károly Jakab, Kathy L. Sharpe-Timms, and Gabor Forgacs: The Interplay of Cell-Cell and Cell-Matrix Interactions in the Invasive Properties of Brain Tumors
Biophys. J. 2006 91: 2708-2716; Published ahead of print on July 7, 2006 as doi:10.1529/biophysj.105.077834. [Abstract] [Full Text] [PDF]

Magnus Andersson, Erik Fällman, Bernt Eric Uhlin, and Ove Axner: Dynamic Force Spectroscopy of E. coli P Pili
Biophys. J. 2006 91: 2717-2725; Published ahead of print on July 14, 2006 as doi:10.1529/biophysj.106.087429. [Abstract] [Full Text] [PDF]

Guanglai Li and Jay X. Tang: Low Flagellar Motor Torque and High Swimming Efficiency of Caulobacter crescentus Swarmer Cells
Biophys. J. 2006 91: 2726-2734; Published ahead of print on July 14, 2006 as doi:10.1529/biophysj.106.080697. [Abstract] [Full Text] [PDF]

ELECTROPHYSIOLOGY:

Elena G. Tolkacheva, Justus M. B. Anumonwo, and José Jalife: Action Potential Duration Restitution Portraits of Mammalian Ventricular Myocytes: Role of Calcium Current
Biophys. J. 2006 91: 2735-2745; Published ahead of print on July 14, 2006 as doi:10.1529/biophysj.106.083865. [Abstract] [Full Text] [PDF]