NEW AND NOTABLE:

Albert H. Beth

How to Assemble the Parts: Structures of Protein Complexes from their Components
Biophys. J. 2007 93: 3339(10) [Full Text] [PDF]  

BIOPHYSICAL THEORY AND MODELING:

Kelly Brock, Kemper Talley, Kacey Coley, Petras Kundrotas, and Emil Alexov

Optimization of Electrostatic Interactions in Protein-Protein Complexes
Biophys. J. 2007 93: 3340-3352; Published ahead of print on August 10, 2007 as doi:10.1529/biophysj.107.112367. [Abstract] [Full Text] [PDF] [Supplement]  

Chungwen Liang, Philippe Derreumaux, and Guanghong Wei

Structure and Aggregation Mechanism of ß₂-Microglobulin (83–99) Peptides Studied by Molecular Dynamics Simulations
Biophys. J. 2007 93: 3353-3362; Published ahead of print on August 10, 2007 as doi:10.1529/biophysj.107.105585. [Abstract] [Full Text] [PDF] [Supplement]  

Zhisong Wang, Min Feng, Wenwei Zheng, and Dagong Fan

Kinesin Is an Evolutionarily Fine-Tuned Molecular Ratchet-and-Pawl Device of Decisively Locked Direction
Biophys. J. 2007 93: 3363-3372; Published ahead of print on August 3, 2007 as doi:10.1529/biophysj.107.108233. [Abstract] [Full Text] [PDF]  

Jeremiah Nummela and Ioan Andricioaei

Exact Low-Force Kinetics from High-Force Single-Molecule Unfolding Events
Biophys. J. 2007 93: 3373-3381; Published ahead of print on August 17, 2007 as doi:10.1529/biophysj.107.111658. [Abstract] [Full Text] [PDF]  

David A. C. Beck and Valerie Daggett

A One-Dimensional Reaction Coordinate for Identification of Transition States from Explicit Solvent P_fold-Like Calculations
Biophys. J. 2007 93: 3382-3391. [Abstract] [Full Text] [PDF]  

Hironori Kokubo, Jörg Rösgen, D. Wayne Bolen, and B. Montgomery Pettitt

Molecular Basis of the Apparent Near Ideality of Urea Solutions
Biophys. J. 2007 93: 3392-3407; Published ahead of print on August 10, 2007 as doi:10.1529/biophysj.107.114181. [Abstract] [Full Text] [PDF]  

Leighton T. Izu, Tamás Bányász, C. William Balke, and Ye Chen-Izu

Eavesdropping on the Social Lives of Ca²⁺ Sparks
Biophys. J. 2007 93: 3408-3420; Published ahead of print on August 3, 2007 as doi:10.1529/biophysj.107.112466. [Abstract] [Full Text] [PDF]  

Michael Cooling, Peter Hunter, and Edmund J. Crampin

Modeling Hypertrophic IP3 Transients in the Cardiac Myocyte
Biophys. J. 2007 93: 3421-3433; Published ahead of print on August 10, 2007 as doi:10.1529/biophysj.107.110031. [Abstract] [Full Text] [PDF] [Supplement]  

Ombeline de La Rochefoucauld and Elizabeth S. Olson

The Role of Organ of Corti Mass in Passive Cochlear Tuning
Biophys. J. 2007 93: 3434-3450; Published ahead of print on September 28, 2007 as doi:10.1529/biophysj.107.109744. [Abstract] [Full Text] [PDF]  

Yurie Okabe and Masaki Sasai

Stable Stochastic Dynamics in Yeast Cell Cycle
Biophys. J. 2007 93: 3451-3459; Published ahead of print on August 17, 2007 as doi:10.1529/biophysj.107.109991. [Abstract] [Full Text] [PDF] [Supplement]  

Kei Moritsugu and Jeremy C. Smith

Coarse-Grained Biomolecular Simulation with REACH: Realistic Extension Algorithm via Covariance Hessian
Biophys. J. 2007 93: 3460-3469; Published ahead of print on August 10, 2007 as doi:10.1529/biophysj.107.111898. [Abstract] [Full Text] [PDF]  

CHANNELS, RECEPTORS, AND ELECTRICAL SIGNALING:

Hanning Chen, Yujie Wu, and Gregory A. Voth

Proton Transport Behavior through the Influenza A M2 Channel: Insights from Molecular Simulation
Biophys. J. 2007 93: 3470-3479; Published ahead of print on August 10, 2007 as doi:10.1529/biophysj.107.105742. [Abstract] [Full Text] [PDF]  

MEMBRANES:

Shadi Abu-Baker, Xiaoyang Qi, and Gary A. Lorigan

Investigating the Interaction of Saposin C with POPS and POPC Phospholipids: A Solid-State NMR Spectroscopic Study
Biophys. J. 2007 93: 3480-3490; Published ahead of print on August 17, 2007 as doi:10.1529/biophysj.107.107789. [Abstract] [Full Text] [PDF] [Supplement]  

Howard L. Brockman, Maureen M. Momsen, Weiling C. King, and John A. Glomset

Structural Determinants of the Packing and Electrostatic Behavior of Unsaturated Phosphoglycerides
Biophys. J. 2007 93: 3491-3503; Published ahead of print on August 10, 2007 as doi:10.1529/biophysj.107.110072. [Abstract] [Full Text] [PDF]  

Cristina Arnulphi, Jesús Sot, Marcos García-Pacios, José-Luis R. Arrondo, Alicia Alonso, and Félix M. Goñi

Triton X-100 Partitioning into Sphingomyelin Bilayers at Subsolubilizing Detergent Concentrations: Effect of Lipid Phase and a Comparison with Dipalmitoylphosphatidylcholine
Biophys. J. 2007 93: 3504-3514; Published ahead of print on August 3, 2007 as doi:10.1529/biophysj.107.104463. [Abstract] [Full Text] [PDF] [Supplement]  

XiaoYang Luo, Hideyo Inouye, Abby A. R. Gross, Marla M. Hidalgo, Deepak Sharma, Daniel Lee, Robin L. Avila, Mario Salmona, and Daniel A. Kirschner

Cytoplasmic Domain of Zebrafish Myelin Protein Zero: Adhesive Role Depends on ß-Conformation
Biophys. J. 2007 93: 3515-3528; Published ahead of print on August 10, 2007 as doi:10.1529/biophysj.107.112771. [Abstract] [Full Text] [PDF]  

Werner L. Vos, Marieke Schor, Petr V. Nazarov, Rob B. M. Koehorst, Ruud B. Spruijt, and Marcus A. Hemminga

Structure of Membrane-Embedded M13 Major Coat Protein Is Insensitive to Hydrophobic Stress
Biophys. J. 2007 93: 3541-3547; Published ahead of print on August 17, 2007 as doi:10.1529/biophysj.107.112698. [Abstract] [Full Text] [PDF]  

L.-Ruth Montes, Alicia Alonso, Felix M. Goñi, and Luis A. Bagatolli

Giant Unilamellar Vesicles Electroformed from Native Membranes and Organic Lipid Mixtures under Physiological Conditions
Biophys. J. 2007 93: 3548-3554; Published ahead of print on August 17, 2007 as doi:10.1529/biophysj.107.116228. [Abstract] [Full Text] [PDF]  

MUSCLE AND CONTRACTILITY:

Miriam F. Halstead, Katalin Ajtai, Alan R. Penheiter, Joshua D. Spencer, Ye Zheng, Emma A. Morrison, and Thomas P. Burghardt

An Unusual Transduction Pathway in Human Tonic Smooth Muscle Myosin
Biophys. J. 2007 93: 3555-3566; Published ahead of print on August 17, 2007 as doi:10.1529/biophysj.106.100818. [Abstract] [Full Text] [PDF] [Supplement]  

NUCLEIC ACIDS:

Piotr Guga, Magdalena Janicka, Anna Maciaszek, Beata Rebowska, and Genowefa Nowak

Hoogsteen-Paired Homopurine [R_P-PS]-DNA and Homopyrimidine RNA Strands Form a Thermally Stable Parallel Duplex
Biophys. J. 2007 93: 3567-3574; Published ahead of print on August 10, 2007 as doi:10.1529/biophysj.107.108183. [Abstract] [Full Text] [PDF] [Supplement]  

Harold D. Kim, Joseph D. Puglisi, and Steven Chu

Fluctuations of Transfer RNAs between Classical and Hybrid States
Biophys. J. 2007 93: 3575-3582; Published ahead of print on August 10, 2007 as doi:10.1529/biophysj.107.109884. [Abstract] [Full Text] [PDF]  

PROTEINS:

Julia Morfill, Kerstin Blank, Christian Zahnd, Beatrice Luginbühl, Ferdinand Kühner, Kay-E. Gottschalk, Andreas Plückthun, and Hermann E. Gaub

Affinity-Matured Recombinant Antibody Fragments Analyzed by Single-Molecule Force Spectroscopy
Biophys. J. 2007 93: 3583-3590; Published ahead of print on August 3, 2007 as doi:10.1529/biophysj.107.112532. [Abstract] [Full Text] [PDF]  

Jordi Cohen and Klaus Schulten

O₂ Migration Pathways Are Not Conserved across Proteins of a Similar Fold
Biophys. J. 2007 93: 3591-3600; Published ahead of print on August 10, 2007 as doi:10.1529/biophysj.107.108712. [Abstract] [Full Text] [PDF]  

Maria Isabel Viseu, Eduardo P. Melo, Teresa Isabel Carvalho, Raquel F. Correia, and Sílvia M. B. Costa

Unfolding Kinetics of ß-Lactoglobulin Induced by Surfactant and Denaturant: A Stopped-Flow/Fluorescence Study
Biophys. J. 2007 93: 3601-3612; Published ahead of print on August 10, 2007 as doi:10.1529/biophysj.106.101667. [Abstract] [Full Text] [PDF]  

Nadtanet Nunthaboot, Somsak Pianwanit, Vudhichai Parasuk, Jerry O. Ebalunode, James M. Briggs, and Sirirat Kokpol

Hybrid Quantum Mechanical/Molecular Mechanical Molecular Dynamics Simulations of HIV-1 Integrase/Inhibitor Complexes
Biophys. J. 2007 93: 3613-3626; Published ahead of print on August 10, 2007 as doi:10.1529/biophysj.107.108464. [Abstract] [Full Text] [PDF] [Supplement]  

Xiaoqin Huang and Chang-Guo Zhan

How Dopamine Transporter Interacts with Dopamine: Insights from Molecular Modeling and Simulation
Biophys. J. 2007 93: 3627-3639; Published ahead of print on August 17, 2007 as doi:10.1529/biophysj.107.110924. [Abstract] [Full Text] [PDF]  

SUPRAMOLECULAR ASSEMBLIES:

Angela Ostuni, Brigida Bochicchio, Maria F. Armentano, Faustino Bisaccia, and Antonio M. Tamburro

Molecular and Supramolecular Structural Studies on Human Tropoelastin Sequences
Biophys. J. 2007 93: 3640-3651; Published ahead of print on August 10, 2007 as doi:10.1529/biophysj.107.110809. [Abstract] [Full Text] [PDF] [Supplement]  

Aurélie Bertin, Stéphanie Mangenot, Madalena Renouard, Dominique Durand, and Françoise Livolant

Structure and Phase Diagram of Nucleosome Core Particles Aggregated by Multivalent Cations
Biophys. J. 2007 93: 3652-3663; Published ahead of print on August 10, 2007 as doi:10.1529/biophysj.107.108365. [Abstract] [Full Text] [PDF]  

Rajamani Lakshminarayanan, Daming Fan, Chang Du, and Janet Moradian-Oldak

The Role of Secondary Structure in the Entropically Driven Amelogenin Self-Assembly
Biophys. J. 2007 93: 3664-3674; Published ahead of print on August 17, 2007 as doi:10.1529/biophysj.107.113936. [Abstract] [Full Text] [PDF]  

SPECTROSCOPY, IMAGING, OTHER TECHNIQUES:

D. Hilger, Y. Polyhach, E. Padan, H. Jung, and G. Jeschke

High-Resolution Structure of a Na⁺/H⁺ Antiporter Dimer Obtained by Pulsed Electron Paramagnetic Resonance Distance Measurements
Biophys. J. 2007 93: 3675-3683; Published ahead of print on August 17, 2007 as doi:10.1529/biophysj.107.109769. [Abstract] [Full Text] [PDF]  

Chenxu Yu and Joseph Irudayaraj

Quantitative Evaluation of Sensitivity and Selectivity of Multiplex NanoSPR Biosensor Assays
Biophys. J. 2007 93: 3684-3692; Published ahead of print on July 27, 2007 as doi:10.1529/biophysj.107.110064. [Abstract] [Full Text] [PDF]  

CELL BIOPHYSICS:

Igor Titushkin and Michael Cho

Modulation of Cellular Mechanics during Osteogenic Differentiation of Human Mesenchymal Stem Cells
Biophys. J. 2007 93: 3693-3702; Published ahead of print on August 3, 2007 as doi:10.1529/biophysj.107.107797. [Abstract] [Full Text] [PDF] [Supplement]  

Gladys Massiera, Kathleen M. Van Citters, Paul L. Biancaniello, and John C. Crocker

Mechanics of Single Cells: Rheology, Time Dependence, and Fluctuations
Biophys. J. 2007 93: 3703-3713; Published ahead of print on August 10, 2007 as doi:10.1529/biophysj.107.111641. [Abstract] [Full Text] [PDF]  

ELECTROPHYSIOLOGY:

Martin J. Bishop, Blanca Rodriguez, Fujian Qu, Igor R. Efimov, David J. Gavaghan, and Natalia A. Trayanova

The Role of Photon Scattering in Optical Signal Distortion during Arrhythmia and Defibrillation
Biophys. J. 2007 93: 3714-3726. [Abstract] [Full Text] [PDF]  

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