BIOPHYSICAL LETTERS:

R. E. Kumon, M. Aehle, D. Sabens, P. Parikh, D. Kourennyi, and C. X. Deng

Ultrasound-Induced Calcium Oscillations and Waves in Chinese Hamster Ovary Cells in the Presence of Microbubbles
Biophys. J. 2007 93: L29-L31; Published ahead of print on July 13, 2007 as doi:10.1529/biophysj.107.113365. [Abstract] [Full Text] [PDF]  

Adam P. Hill, T. J. Campbell, P. S. Bansal, P. W. Kuchel, and J. I. Vandenberg

The S631A Mutation Causes a Mechanistic Switch in the Block of hERG Channels by CnErg1
Biophys. J. 2007 93: L32-L34; Published ahead of print on July 13, 2007 as doi:10.1529/biophysj.107.114561. [Abstract] [Full Text] [PDF]  

Yael Lavi, Michael A. Edidin, and Levi A. Gheber

Dynamic Patches of Membrane Proteins
Biophys. J. 2007 93: L35-L37; Published ahead of print on July 13, 2007 as doi:10.1529/biophysj.107.111567. [Abstract] [Full Text] [PDF]  

BIOPHYSICAL THEORY AND MODELING:

S. Rüdiger, J. W. Shuai, W. Huisinga, C. Nagaiah, G. Warnecke, I. Parker, and M. Falcke

Hybrid Stochastic and Deterministic Simulations of Calcium Blips
Biophys. J. 2007 93: 1847-1857; Published ahead of print on May 11, 2007 as doi:10.1529/biophysj.106.099879. [Abstract] [Full Text] [PDF]  

Dalit Shental-Bechor, Turkan Haliloglu, and Nir Ben-Tal

Interactions of Cationic-Hydrophobic Peptides with Lipid Bilayers: A Monte Carlo Simulation Method
Biophys. J. 2007 93: 1858-1871; Published ahead of print on May 11, 2007 as doi:10.1529/biophysj.106.103812. [Abstract] [Full Text] [PDF]  

Steven S. Andrews and Adam P. Arkin

A Mechanical Explanation for Cytoskeletal Rings and Helices in Bacteria
Biophys. J. 2007 93: 1872-1884; Published ahead of print on May 18, 2007 as doi:10.1529/biophysj.106.102343. [Abstract] [Full Text] [PDF] [Supplement]  

Maria Andrea Mroginski, Franz Mark, Walter Thiel, and Peter Hildebrandt

Quantum Mechanics/Molecular Mechanics Calculation of the Raman Spectra of the Phycocyanobilin Chromophore in -C-Phycocyanin
Biophys. J. 2007 93: 1885-1894; Published ahead of print on May 18, 2007 as doi:10.1529/biophysj.107.108878. [Abstract] [Full Text] [PDF] [Supplement]  

Agnieszka Szarecka, Yan Xu, and Pei Tang

Dynamics of Firefly Luciferase Inhibition by General Anesthetics: Gaussian and Anisotropic Network Analyses
Biophys. J. 2007 93: 1895-1905; Published ahead of print on May 18, 2007 as doi:10.1529/biophysj.106.102780. [Abstract] [Full Text] [PDF] [Supplement]  

Yelena Sliozberg and Cameron F. Abrams

Spontaneous Conformational Changes in the E. coli GroEL Subunit from All-Atom Molecular Dynamics Simulations
Biophys. J. 2007 93: 1906-1916; Published ahead of print on May 18, 2007 as doi:10.1529/biophysj.107.108043. [Abstract] [Full Text] [PDF]  

Mathieu Coppey, Alexander M. Berezhkovskii, Stuart C. Sealfon, and Stanislav Y. Shvartsman

Time and Length Scales of Autocrine Signals in Three Dimensions
Biophys. J. 2007 93: 1917-1922. [Abstract] [Full Text] [PDF]  

Andreas Vitalis, Xiaoling Wang, and Rohit V. Pappu

Quantitative Characterization of Intrinsic Disorder in Polyglutamine: Insights from Analysis Based on Polymer Theories
Biophys. J. 2007 93: 1923-1937; Published ahead of print on May 25, 2007 as doi:10.1529/biophysj.107.110080. [Abstract] [Full Text] [PDF]  

Hyunbum Jang, Jie Zheng, and Ruth Nussinov

Models of ß-Amyloid Ion Channels in the Membrane Suggest That Channel Formation in the Bilayer Is a Dynamic Process
Biophys. J. 2007 93: 1938-1949; Published ahead of print on May 25, 2007 as doi:10.1529/biophysj.107.110148. [Abstract] [Full Text] [PDF]  

Julio A. Kovacs, Mark Yeager, and Ruben Abagyan

Computational Prediction of Atomic Structures of Helical Membrane Proteins Aided by EM Maps
Biophys. J. 2007 93: 1950-1959; Published ahead of print on May 11, 2007 as doi:10.1529/biophysj.106.102137. [Abstract] [Full Text] [PDF]  

CHANNELS, RECEPTORS, AND ELECTRICAL SIGNALING:

Dezso Boda, Wolfgang Nonner, Mónika Valiskó, Douglas Henderson, Bob Eisenberg, and Dirk Gillespie

Steric Selectivity in Na Channels Arising from Protein Polarization and Mobile Side Chains
Biophys. J. 2007 93: 1960-1980; Published ahead of print on May 25, 2007 as doi:10.1529/biophysj.107.105478. [Abstract] [Full Text] [PDF]  

Huai-Ren Chang and Chung-Chin Kuo

Extracellular Proton-Modulated Pore-Blocking Effect of the Anticonvulsant Felbamate on NMDA Channels
Biophys. J. 2007 93: 1981-1992; Published ahead of print on May 18, 2007 as doi:10.1529/biophysj.106.103176. [Abstract] [Full Text] [PDF]  

MEMBRANES:

Nikolai A. Braun, Andrew W. Davis, and Steven M. Theg

The Chloroplast Tat Pathway Utilizes the Transmembrane Electric Potential as an Energy Source
Biophys. J. 2007 93: 1993-1998; Published ahead of print on May 18, 2007 as doi:10.1529/biophysj.106.098731. [Abstract] [Full Text] [PDF]  

P. Rispoli, R. Carzino, T. Svaldo-Lanero, A. Relini, O. Cavalleri, A. Fasano, G. M. Liuzzi, G. Carlone, P. Riccio, A. Gliozzi, and R. Rolandi

A Thermodynamic and Structural Study of Myelin Basic Protein in Lipid Membrane Models
Biophys. J. 2007 93: 1999-2010; Published ahead of print on May 18, 2007 as doi:10.1529/biophysj.106.103820. [Abstract] [Full Text] [PDF]  

Manasa V. Gudheti, Michael Mlodzianoski, and Samuel T. Hess

Imaging and Shape Analysis of GUVs as Model Plasma Membranes: Effect of Trans DOPC on Membrane Properties
Biophys. J. 2007 93: 2011-2023; Published ahead of print on May 18, 2007 as doi:10.1529/biophysj.106.103374. [Abstract] [Full Text] [PDF]  

Kislon Voïtchovsky, Sonia Antoranz Contera, and J. F. Ryan

Electrostatic and Steric Interactions Determine Bacteriorhodopsin Single-Molecule Biomechanics
Biophys. J. 2007 93: 2024-2037; Published ahead of print on May 18, 2007 as doi:10.1529/biophysj.106.101469. [Abstract] [Full Text] [PDF]  

Maria K. Ratajczak, Y. T. Chris Ko, Yvonne Lange, Theodore L. Steck, and Ka Yee C. Lee

Cholesterol Displacement from Membrane Phospholipids by Hexadecanol
Biophys. J. 2007 93: 2038-2047; Published ahead of print on May 25, 2007 as doi:10.1529/biophysj.107.109553. [Abstract] [Full Text] [PDF]  

Stephanie Tristram-Nagle and John F. Nagle

HIV-1 Fusion Peptide Decreases Bending Energy and Promotes Curved Fusion Intermediates
Biophys. J. 2007 93: 2048-2055; Published ahead of print on May 25, 2007 as doi:10.1529/biophysj.107.109181. [Abstract] [Full Text] [PDF]  

Rebecca Notman, Wouter K. den Otter, Massimo G. Noro, W. J. Briels, and Jamshed Anwar

The Permeability Enhancing Mechanism of DMSO in Ceramide Bilayers Simulated by Molecular Dynamics
Biophys. J. 2007 93: 2056-2068; Published ahead of print on May 18, 2007 as doi:10.1529/biophysj.107.104703. [Abstract] [Full Text] [PDF]  

Philippe Desmeules, Sara-Édith Penney, Bernard Desbat, and Christian Salesse

Determination of the Contribution of the Myristoyl Group and Hydrophobic Amino Acids of Recoverin on its Dynamics of Binding to Lipid Monolayers
Biophys. J. 2007 93: 2069-2082; Published ahead of print on May 25, 2007 as doi:10.1529/biophysj.106.103481. [Abstract] [Full Text] [PDF]  

MUSCLE AND CONTRACTILITY:

L. Michel Espinoza-Fonseca, David Kast, and David D. Thomas

Molecular Dynamics Simulations Reveal a Disorder-to-Order Transition on Phosphorylation of Smooth Muscle Myosin
Biophys. J. 2007 93: 2083-2090; Published ahead of print on June 1, 2007 as doi:10.1529/biophysj.106.095802. [Abstract] [Full Text] [PDF]  

Delisa I. García, Peter Lanigan, Martin Webb, Timothy G. West, Jose Requejo-Isidro, Egidijus Auksorius, Chris Dunsby, Mark Neil, Paul French, and Michael A. Ferenczi

Fluorescence Lifetime Imaging to Detect Actomyosin States in Mammalian Muscle Sarcomeres
Biophys. J. 2007 93: 2091-2101; Published ahead of print on May 11, 2007 as doi:10.1529/biophysj.106.096479. [Abstract] [Full Text] [PDF]  

Pasquale Bianco, Attila Nagy, András Kengyel, Dávid Szatmári, Zsolt Mártonfalvi, Tamás Huber, and Miklós S. Z. Kellermayer

Interaction Forces between F-Actin and Titin PEVK Domain Measured with Optical Tweezers
Biophys. J. 2007 93: 2102-2109; Published ahead of print on May 18, 2007 as doi:10.1529/biophysj.107.106153. [Abstract] [Full Text] [PDF]  

NUCLEIC ACIDS:

Qi Cai, Ana Karin Kusnetzow, Kálmán Hideg, Eric A. Price, Ian S. Haworth, and Peter Z. Qin

Nanometer Distance Measurements in RNA Using Site-Directed Spin Labeling
Biophys. J. 2007 93: 2110-2117; Published ahead of print on May 25, 2007 as doi:10.1529/biophysj.107.109439. [Abstract] [Full Text] [PDF] [Supplement]  

PHOTOBIOPHYSICS:

Maxime T. A. Alexandre, Daniel C. Lührs, Ivo H. M. van Stokkum, Roger Hiller, Marie-Louise Groot, John T. M. Kennis, and Rienk van Grondelle

Triplet State Dynamics in Peridinin-Chlorophyll-a-Protein: A New Pathway of Photoprotection in LHCs?
Biophys. J. 2007 93: 2118-2128; Published ahead of print on May 4, 2007 as doi:10.1529/biophysj.107.106674. [Abstract] [Full Text] [PDF]  

PROTEINS:

Lavanya Rajagopalan, Christopher C. Chin, and Krishna Rajarathnam

Role of Intramolecular Disulfides in Stability and Structure of a Noncovalent Homodimer
Biophys. J. 2007 93: 2129-2134; Published ahead of print on May 18, 2007 as doi:10.1529/biophysj.107.108761. [Abstract] [Full Text] [PDF]  

Giampiero De Sanctis, Giovanni Petrella, Chiara Ciaccio, Alessandro Feis, Giulietta Smulevich, and Massimo Coletta

A Comparative Study on Axial Coordination and Ligand Binding in Ferric Mini Myoglobin and Horse Heart Myoglobin
Biophys. J. 2007 93: 2135-2142; Published ahead of print on May 11, 2007 as doi:10.1529/biophysj.106.098764. [Abstract] [Full Text] [PDF]  

M. I. Smith, J. S. Sharp, and C. J. Roberts

Nucleation and Growth of Insulin Fibrils in Bulk Solution and at Hydrophobic Polystyrene Surfaces
Biophys. J. 2007 93: 2143-2151; Published ahead of print on May 11, 2007 as doi:10.1529/biophysj.107.105338. [Abstract] [Full Text] [PDF]  

Zhonglin Luo, Jiandong Ding, and Yaoqi Zhou

Temperature-Dependent Folding Pathways of Pin1 WW Domain: An All-Atom Molecular Dynamics Simulation of a G Model
Biophys. J. 2007 93: 2152-2161; Published ahead of print on May 18, 2007 as doi:10.1529/biophysj.106.102095. [Abstract] [Full Text] [PDF]  

Mads Bruun Hovgaard, Mingdong Dong, Daniel Erik Otzen, and Flemming Besenbacher

Quartz Crystal Microbalance Studies of Multilayer Glucagon Fibrillation at the Solid-Liquid Interface
Biophys. J. 2007 93: 2162-2169; Published ahead of print on May 18, 2007 as doi:10.1529/biophysj.107.109686. [Abstract] [Full Text] [PDF]  

Alicia Roque, Inma Ponte, and Pedro Suau

Macromolecular Crowding Induces a Molten Globule State in the C-Terminal Domain of Histone H1
Biophys. J. 2007 93: 2170-2177; Published ahead of print on May 18, 2007 as doi:10.1529/biophysj.107.104513. [Abstract] [Full Text] [PDF]  

Yulong Li, George J. Augustine, and Keith Weninger

Kinetics of Complexin Binding to the SNARE Complex: Correcting Single Molecule FRET Measurements for Hidden Events
Biophys. J. 2007 93: 2178-2187; Published ahead of print on May 18, 2007 as doi:10.1529/biophysj.106.101220. [Abstract] [Full Text] [PDF] [Supplement]  

SUPRAMOLECULAR ASSEMBLIES:

V. Urboniene, O. Vrublevskaja, G. Trinkunas, A. Gall, B. Robert, and L. Valkunas

Solvation Effect of Bacteriochlorophyll Excitons in Light-Harvesting Complex LH2
Biophys. J. 2007 93: 2188-2198; Published ahead of print on May 18, 2007 as doi:10.1529/biophysj.106.103093. [Abstract] [Full Text] [PDF]  

SPECTROSCOPY, IMAGING, OTHER TECHNIQUES:

Jui-I. Chao, Elena Perevedentseva, Pei-Hua Chung, Kuang-Kai Liu, Chih-Yuan Cheng, Chia-Ching Chang, and Chia-Liang Cheng

Nanometer-Sized Diamond Particle as a Probe for Biolabeling
Biophys. J. 2007 93: 2199-2208; Published ahead of print on May 18, 2007 as doi:10.1529/biophysj.107.108134. [Abstract] [Full Text] [PDF]  

CELL BIOPHYSICS:

Aprotim Mazumder and G. V. Shivashankar

Gold-Nanoparticle-Assisted Laser Perturbation of Chromatin Assembly Reveals Unusual Aspects of Nuclear Architecture within Living Cells
Biophys. J. 2007 93: 2209-2216; Published ahead of print on May 11, 2007 as doi:10.1529/biophysj.106.102202. [Abstract] [Full Text] [PDF] [Supplement]  

T. Ishikawa, G. Sekiya, Y. Imai, and T. Yamaguchi

Hydrodynamic Interactions between Two Swimming Bacteria
Biophys. J. 2007 93: 2217-2225; Published ahead of print on May 11, 2007 as doi:10.1529/biophysj.107.110254. [Abstract] [Full Text] [PDF]  

Thomas P. Burghardt, Katalin Ajtai, Daniel K. Chan, Miriam F. Halstead, Jinhui Li, and Ye Zheng

GFP-Tagged Regulatory Light Chain Monitors Single Myosin Lever-Arm Orientation in a Muscle Fiber
Biophys. J. 2007 93: 2226-2239; Published ahead of print on May 18, 2007 as doi:10.1529/biophysj.107.107433. [Abstract] [Full Text] [PDF] [Supplement]  

Giuseppe Zucchelli, Doriano Brogioli, Anna Paola Casazza, Flavio M. Garlaschi, and Robert C. Jennings

Chlorophyll Ring Deformation Modulates Q_y Electronic Energy in Chlorophyll-Protein Complexes and Generates Spectral Forms
Biophys. J. 2007 93: 2240-2254; Published ahead of print on May 18, 2007 as doi:10.1529/biophysj.107.104554. [Abstract] [Full Text] [PDF]  

BIOENERGETICS:

Wolfgang Wiechert

The Thermodynamic Meaning of Metabolic Exchange Fluxes
Biophys. J. 2007 93: 2255-2264; Published ahead of print on May 25, 2007 as doi:10.1529/biophysj.106.099895. [Abstract] [Full Text] [PDF] [Supplement]  

OTHER:

Claus-Peter Richter, Gulam Emadi, Geoffrey Getnick, Alicia Quesnel, and Peter Dallos

Tectorial Membrane Stiffness Gradients
Biophys. J. 2007 93: 2265-2276; Published ahead of print on May 11, 2007 as doi:10.1529/biophysj.106.094474. [Abstract] [Full Text] [PDF]  

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