BIOPHYSICAL THEORY AND MODELING:

Stefan Legewie, Birgit Schoeberl, Nils Blüthgen, and Hanspeter Herzel

Competing Docking Interactions can Bring About Bistability in the MAPK Cascade
Biophys. J. 2007 93: 2279-2288; Published ahead of print on May 25, 2007 as doi:10.1529/biophysj.107.109132. [Abstract] [Full Text] [PDF] [Supplement]  

Wenjun Zheng, Bernard R. Brooks, and D. Thirumalai

Allosteric Transitions in the Chaperonin GroEL are Captured by a Dominant Normal Mode that is Most Robust to Sequence Variations
Biophys. J. 2007 93: 2289-2299; Published ahead of print on June 8, 2007 as doi:10.1529/biophysj.107.105270. [Abstract] [Full Text] [PDF]  

Yiwen Chen, Sharon L. Campbell, and Nikolay V. Dokholyan

Deciphering Protein Dynamics from NMR Data Using Explicit Structure Sampling and Selection
Biophys. J. 2007 93: 2300-2306; Published ahead of print on June 8, 2007 as doi:10.1529/biophysj.107.104174. [Abstract] [Full Text] [PDF] [Supplement]  

CHANNELS, RECEPTORS, AND ELECTRICAL SIGNALING:

Amir Broomand, Fredrik Österberg, Tara Wardi, and Fredrik Elinder

Electrostatic Domino Effect in the Shaker K Channel Turret
Biophys. J. 2007 93: 2307-2314; Published ahead of print on June 1, 2007 as doi:10.1529/biophysj.107.104349. [Abstract] [Full Text] [PDF]  

Denis Bucher, Leonardo Guidoni, and Ursula Rothlisberger

The Protonation State of the Glu-71/Asp-80 Residues in the KcsA Potassium Channel: A First-Principles QM/MM Molecular Dynamics Study
Biophys. J. 2007 93: 2315-2324; Published ahead of print on May 25, 2007 as doi:10.1529/biophysj.106.102509. [Abstract] [Full Text] [PDF]  

Michael J. Coady, Bernadette Wallendorff, Francis Bourgeois, Francois Charron, and Jean-Yves Lapointe

Establishing a Definitive Stoichiometry for the Na⁺/Monocarboxylate Cotransporter SMCT1
Biophys. J. 2007 93: 2325-2331; Published ahead of print on May 25, 2007 as doi:10.1529/biophysj.107.108555. [Abstract] [Full Text] [PDF]  

Haijun Chen and Steve A. N. Goldstein

Serial Perturbation of MinK in I_Ks Implies an -Helical Transmembrane Span Traversing the Channel Corpus
Biophys. J. 2007 93: 2332-2340; Published ahead of print on June 1, 2007 as doi:10.1529/biophysj.107.109702. [Abstract] [Full Text] [PDF]  

Vincent P. Santarelli, Amy L. Eastwood, Dennis A. Dougherty, Christopher A. Ahern, and Richard Horn

Calcium Block of Single Sodium Channels: Role of a Pore-Lining Aromatic Residue
Biophys. J. 2007 93: 2341-2349; Published ahead of print on June 1, 2007 as doi:10.1529/biophysj.107.106856. [Abstract] [Full Text] [PDF]  

MEMBRANES:

Rachel W. Bailey, Erin D. Olson, Mai P. Vu, Taylor J. Brueseke, Leslie Robertson, Ryan E. Christensen, Kristen H. Parker, Allan M. Judd, and John D. Bell

Relationship between Membrane Physical Properties and Secretory Phospholipase A2 Hydrolysis Kinetics in S49 Cells during Ionophore-Induced Apoptosis
Biophys. J. 2007 93: 2350-2362; Published ahead of print on June 1, 2007 as doi:10.1529/biophysj.107.104679. [Abstract] [Full Text] [PDF]  

Yana K. Reshetnyak, Michael Segala, Oleg A. Andreev, and Donald M. Engelman

A Monomeric Membrane Peptide that Lives in Three Worlds: In Solution, Attached to, and Inserted across Lipid Bilayers
Biophys. J. 2007 93: 2363-2372; Published ahead of print on June 8, 2007 as doi:10.1529/biophysj.107.109967. [Abstract] [Full Text] [PDF]  

Kerstin Wagner and Gerald Brezesinski

Phospholipase D Activity Is Regulated by Product Segregation and the Structure Formation of Phosphatidic Acid within Model Membranes
Biophys. J. 2007 93: 2373-2383; Published ahead of print on June 8, 2007 as doi:10.1529/biophysj.107.108787. [Abstract] [Full Text] [PDF]  

NUCLEIC ACIDS:

Johan Lagerqvist, Michael Zwolak, and Massimiliano Di Ventra

Influence of the Environment and Probes on Rapid DNA Sequencing via Transverse Electronic Transport
Biophys. J. 2007 93: 2384-2390; Published ahead of print on May 25, 2007 as doi:10.1529/biophysj.106.102269. [Abstract] [Full Text] [PDF]  

Ravi Radhakrishnan

Coupling of Fast and Slow Modes in the Reaction Pathway of the Minimal Hammerhead Ribozyme Cleavage
Biophys. J. 2007 93: 2391-2399; Published ahead of print on June 1, 2007 as doi:10.1529/biophysj.107.104661. [Abstract] [Full Text] [PDF] [Supplement]  

Julia Morfill, Ferdinand Kühner, Kerstin Blank, Robert A. Lugmaier, Julia Sedlmair, and Hermann E. Gaub

B-S Transition in Short Oligonucleotides
Biophys. J. 2007 93: 2400-2409; Published ahead of print on June 8, 2007 as doi:10.1529/biophysj.107.106112. [Abstract] [Full Text] [PDF]  

PHOTOBIOPHYSICS:

Daniel H. Murgida, David von Stetten, Peter Hildebrandt, Pascale Schwinté, Friedrich Siebert, Shivani Sharda, Wolfgang Gärtner, and Maria Andrea Mroginski

The Chromophore Structures of the Pr States in Plant and Bacterial Phytochromes
Biophys. J. 2007 93: 2410-2417; Published ahead of print on June 1, 2007 as doi:10.1529/biophysj.107.108092. [Abstract] [Full Text] [PDF]  

Roberta Croce, Agnieszka Chojnicka, Tomas Morosinotto, Janne A. Ihalainen, Frank van Mourik, Jan P. Dekker, Roberto Bassi, and Rienk van Grondelle

The Low-Energy Forms of Photosystem I Light-Harvesting Complexes: Spectroscopic Properties and Pigment-Pigment Interaction Characteristics
Biophys. J. 2007 93: 2418-2428; Published ahead of print on June 1, 2007 as doi:10.1529/biophysj.107.106955. [Abstract] [Full Text] [PDF]  

PROTEINS:

Vesna Serrano, Wenge Liu, and Stefan Franzen

An Infrared Spectroscopic Study of the Conformational Transition of Elastin-Like Polypeptides
Biophys. J. 2007 93: 2429-2435; Published ahead of print on June 1, 2007 as doi:10.1529/biophysj.106.100594. [Abstract] [Full Text] [PDF]  

Sergi Garcia-Manyes, Jasna Brujic, Carmen L. Badilla, and Julio M. Fernández

Force-Clamp Spectroscopy of Single-Protein Monomers Reveals the Individual Unfolding and Folding Pathways of I27 and Ubiquitin
Biophys. J. 2007 93: 2436-2446; Published ahead of print on June 1, 2007 as doi:10.1529/biophysj.107.104422. [Abstract] [Full Text] [PDF]  

Keri Siggers, Cinque Soto, and Arthur G. Palmer, III

Conformational Dynamics in Loop Swap Mutants of Homologous Fibronectin Type III Domains
Biophys. J. 2007 93: 2447-2456; Published ahead of print on May 25, 2007 as doi:10.1529/biophysj.106.100578. [Abstract] [Full Text] [PDF]  

Brijesh Patel and John M. Finke

Folding and Unfolding of TIM Monomers and Dimers
Biophys. J. 2007 93: 2457-2471; Published ahead of print on June 1, 2007 as doi:10.1529/biophysj.107.108068. [Abstract] [Full Text] [PDF]  

Mojtaba Hadian, Brendan M. Corcoran, Richard I. Han, J. Günter Grossmann, and Jeremy P. Bradshaw

Collagen Organization in Canine Myxomatous Mitral Valve Disease: An X-Ray Diffraction Study
Biophys. J. 2007 93: 2472-2476; Published ahead of print on June 8, 2007 as doi:10.1529/biophysj.107.107847. [Abstract] [Full Text] [PDF]  

SUPRAMOLECULAR ASSEMBLIES:

Mei Wang, Maggie Law, Jean Duhamel, and P. Chen

Interaction of a Self-Assembling Peptide with Oligonucleotides: Complexation and Aggregation
Biophys. J. 2007 93: 2477-2490; Published ahead of print on June 1, 2007 as doi:10.1529/biophysj.106.102624. [Abstract] [Full Text] [PDF] [Supplement]  

SPECTROSCOPY, IMAGING, OTHER TECHNIQUES:

I. Renge, R. van Grondelle, and J. P. Dekker

Pigment Spectra and Intermolecular Interaction Potentials in Glasses and Proteins
Biophys. J. 2007 93: 2491-2503; Published ahead of print on June 8, 2007 as doi:10.1529/biophysj.107.104273. [Abstract] [Full Text] [PDF]  

Pauline Dan, Eric Lin, Jingbo Huang, Perveen Biln, and Glen F. Tibbits

Three-Dimensional Distribution of Cardiac Na⁺-Ca²⁺ Exchanger and Ryanodine Receptor during Development
Biophys. J. 2007 93: 2504-2518; Published ahead of print on June 8, 2007 as doi:10.1529/biophysj.107.104943. [Abstract] [Full Text] [PDF] [Supplement]  

Raluca Niesner, Volker Andresen, Jens Neumann, Heinrich Spiecker, and Matthias Gunzer

The Power of Single and Multibeam Two-Photon Microscopy for High-Resolution and High-Speed Deep Tissue and Intravital Imaging
Biophys. J. 2007 93: 2519-2529; Published ahead of print on June 8, 2007 as doi:10.1529/biophysj.106.102459. [Abstract] [Full Text] [PDF] [Supplement]  

CELL BIOPHYSICS:

Francisca Barceló, Jesús Prades, José Antonio Encinar, Sérgio S. Funari, Oliver Vögler, José Manuel González-Ros, and Pablo V. Escribá

Interaction of the C-Terminal Region of the G Protein with Model Membranes
Biophys. J. 2007 93: 2530-2541; Published ahead of print on June 1, 2007 as doi:10.1529/biophysj.106.101196. [Abstract] [Full Text] [PDF]  

Jerry S. H. Lee, Christopher M. Hale, Porntula Panorchan, Shyam B. Khatau, Jerry P. George, Yiider Tseng, Colin L. Stewart, Didier Hodzic, and Denis Wirtz

Nuclear Lamin A/C Deficiency Induces Defects in Cell Mechanics, Polarization, and Migration
Biophys. J. 2007 93: 2542-2552; Published ahead of print on July 13, 2007 as doi:10.1529/biophysj.106.102426. [Abstract] [Full Text] [PDF]  

Thomas M. Fischer

Tank-Tread Frequency of the Red Cell Membrane: Dependence on the Viscosity of the Suspending Medium
Biophys. J. 2007 93: 2553-2561; Published ahead of print on June 1, 2007 as doi:10.1529/biophysj.107.104505. [Abstract] [Full Text] [PDF]  

Karin B. Stibius and Kim Sneppen

Modeling the Two-Hybrid Detector: Experimental Bias on Protein Interaction Networks
Biophys. J. 2007 93: 2562-2566; Published ahead of print on June 8, 2007 as doi:10.1529/biophysj.106.098236. [Abstract] [Full Text] [PDF] [Supplement]  

OTHER:

Jonathon Wells, Chris Kao, Peter Konrad, Tom Milner, Jihoon Kim, Anita Mahadevan-Jansen, and E. Duco Jansen

Biophysical Mechanisms of Transient Optical Stimulation of Peripheral Nerve
Biophys. J. 2007 93: 2567-2580; Published ahead of print on May 25, 2007 as doi:10.1529/biophysj.107.104786. [Abstract] [Full Text] [PDF]  

N. MacQuaide, J. Dempster, and G. L. Smith

Measurement and Modeling of Ca²⁺ Waves in Isolated Rabbit Ventricular Cardiomyocytes
Biophys. J. 2007 93: 2581-2595; Published ahead of print on June 1, 2007 as doi:10.1529/biophysj.106.102293. [Abstract] [Full Text] [PDF] [Supplement]  

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